RNA–Protein interactions for RNA: ENST00000363399.1

RNU6-838P-201, Transcript of RNA, U6 small nuclear 838, pseudogene, humanhuman

BASIC

Gene RNU6-838P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-838P-201ENST00000363399 ZNF526Q8TF50 670 aaPredicted RBP0.08□□□□□ -2.4
RNU6-838P-201ENST00000363399 SPIRE2Q8WWL2 714 aa0.08□□□□□ -2.4
RNU6-838P-201ENST00000363399 ZNF778Q96MU6 729 aa0.08□□□□□ -2.4
RNU6-838P-201ENST00000363399 FAM105AQ9NUU6 356 aa0.08□□□□□ -2.4
RNU6-838P-201ENST00000363399 INVSQ9Y283 1065 aa0.08□□□□□ -2.4
RNU6-838P-201ENST00000363399 PCDHB11Q9Y5F2 797 aa0.08□□□□□ -2.4
RNU6-838P-201ENST00000363399 FBN3Q75N90 2809 aa0.08□□□□□ -2.4
RNU6-838P-201ENST00000363399 LOC102724428A0A0B4J2F2 783 aa0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 NPEPPSL1A6NEC2 478 aa0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 U2SURPO15042 1029 aaKnown RBP0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 GPR42O15529 346 aa0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 LMNAP02545 664 aaKnown RBP0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 EPHA1P21709 976 aa0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 PROZP22891 400 aa0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 TARSP26639 723 aaKnown RBP0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 CDC27P30260 824 aa0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 HOXC13P31276 330 aa0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 VIPR1P32241 457 aa0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 SSTR3P32745 418 aaPredicted RBP0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 ZNF81P51508 661 aa0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 SIK1P57059 783 aa0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 NKPD1Q17RQ9 610 aa0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 USP39Q53GS9 565 aaKnown RBP0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 GSG1LQ6UXU4 331 aa0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 HDGFL2Q7Z4V5 671 aaPredicted RBP0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 KRT78Q8N1N4 520 aa0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 ZNF280CQ8ND82 737 aa0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 ZMYND15Q9H091 742 aa0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 SEMA4AQ9H3S1 761 aa0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 MMP24Q9Y5R2 645 aa0.07□□□□□ -2.4
RNU6-838P-201ENST00000363399 GHRHP01286 108 aa0.06□□□□□ -2.4
RNU6-838P-201ENST00000363399 LIMS1P48059 325 aa0.06□□□□□ -2.4
RNU6-838P-201ENST00000363399 NRLP54845 237 aa0.06□□□□□ -2.4
RNU6-838P-201ENST00000363399 E2F4Q16254 413 aa0.06□□□□□ -2.4
RNU6-838P-201ENST00000363399 PP632Q6XCG6 107 aa0.06□□□□□ -2.4
RNU6-838P-201ENST00000363399 FOXP4Q8IVH2 680 aaPredicted RBP0.06□□□□□ -2.4
RNU6-838P-201ENST00000363399 LRRN4Q8WUT4 740 aa0.06□□□□□ -2.4
RNU6-838P-201ENST00000363399 EXTL1Q92935 676 aa0.06□□□□□ -2.4
RNU6-838P-201ENST00000363399 HEXIM2Q96MH2 286 aaKnown RBP0.06□□□□□ -2.4
RNU6-838P-201ENST00000363399 PRRX2Q99811 253 aa0.06□□□□□ -2.4
RNU6-838P-201ENST00000363399 SH2B1Q9NRF2 756 aaPredicted RBP0.06□□□□□ -2.4
RNU6-838P-201ENST00000363399 TLR7Q9NYK1 1049 aaKnown RBP0.06□□□□□ -2.4
RNU6-838P-201ENST00000363399 PPP4R1LQ9P1A2 415 aa0.06□□□□□ -2.4
RNU6-838P-201ENST00000363399 SUSD2Q9UGT4 822 aa0.06□□□□□ -2.4
RNU6-838P-201ENST00000363399 IQSEC3Q9UPP2 1182 aaPredicted RBP0.06□□□□□ -2.4
RNU6-838P-201ENST00000363399 GPSM3Q9Y4H4 160 aa0.06□□□□□ -2.4
RNU6-838P-201ENST00000363399 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP0.05□□□□□ -2.4
RNU6-838P-201ENST00000363399 PRSS47A8MTI9 375 aa0.05□□□□□ -2.4
RNU6-838P-201ENST00000363399 GNPATO15228 680 aa0.05□□□□□ -2.4
RNU6-838P-201ENST00000363399 BUB1BO60566 1050 aaPredicted RBP0.05□□□□□ -2.4
RNU6-838P-201ENST00000363399 PRG2P13727 222 aa0.05□□□□□ -2.4
RNU6-838P-201ENST00000363399 NCKAP1LP55160 1127 aa0.05□□□□□ -2.4
RNU6-838P-201ENST00000363399 MDM2Q00987 491 aaPredicted RBP0.05□□□□□ -2.4
RNU6-838P-201ENST00000363399 LDHDQ86WU2 507 aa0.05□□□□□ -2.4
RNU6-838P-201ENST00000363399 SIMC1Q8NDZ2 872 aa0.05□□□□□ -2.4
RNU6-838P-201ENST00000363399 CABLES1Q8TDN4 633 aa0.05□□□□□ -2.4
RNU6-838P-201ENST00000363399 PPP1R13LQ8WUF5 828 aa0.05□□□□□ -2.4
RNU6-838P-201ENST00000363399 WBP2Q969T9 261 aa0.05□□□□□ -2.4
RNU6-838P-201ENST00000363399 RGMAQ96B86 450 aa0.05□□□□□ -2.4
RNU6-838P-201ENST00000363399 IFT43Q96FT9 208 aa0.05□□□□□ -2.4
RNU6-838P-201ENST00000363399 WACQ9BTA9 647 aa0.05□□□□□ -2.4
RNU6-838P-201ENST00000363399 C1QTNF7Q9BXJ2 289 aa0.05□□□□□ -2.4
RNU6-838P-201ENST00000363399 CWC22Q9HCG8 908 aaKnown RBP0.05□□□□□ -2.4
RNU6-838P-201ENST00000363399 TXLNGQ9NUQ3 528 aa0.05□□□□□ -2.4
RNU6-838P-201ENST00000363399 USP20Q9Y2K6 914 aa0.05□□□□□ -2.4
RNU6-838P-201ENST00000363399 FRMD4BQ9Y2L6 1034 aa0.05□□□□□ -2.4
RNU6-838P-201ENST00000363399 SYNE2Q8WXH0 6885 aaKnown RBP0.04□□□□□ -2.4
RNU6-838P-201ENST00000363399 OR14I1A6ND48 311 aa0.04□□□□□ -2.4
RNU6-838P-201ENST00000363399 C1SP09871 688 aa0.04□□□□□ -2.4
RNU6-838P-201ENST00000363399 ADH5P11766 374 aa0.04□□□□□ -2.4
RNU6-838P-201ENST00000363399 ATXN7L2Q5T6C5 722 aaPredicted RBP0.04□□□□□ -2.4
RNU6-838P-201ENST00000363399 HGSNATQ68CP4 663 aa0.04□□□□□ -2.4
RNU6-838P-201ENST00000363399 DYMQ7RTS9 669 aa0.04□□□□□ -2.4
RNU6-838P-201ENST00000363399 GPRIN1Q7Z2K8 1008 aa0.04□□□□□ -2.4
RNU6-838P-201ENST00000363399 ULK2Q8IYT8 1036 aa0.04□□□□□ -2.4
RNU6-838P-201ENST00000363399 ZDHHC1Q8WTX9 485 aa0.04□□□□□ -2.4
RNU6-838P-201ENST00000363399 ANKS1AQ92625 1134 aa0.04□□□□□ -2.4
RNU6-838P-201ENST00000363399 NSUN5Q96P11 429 aaKnown RBP0.04□□□□□ -2.4
RNU6-838P-201ENST00000363399 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP0.04□□□□□ -2.4
RNU6-838P-201ENST00000363399 ADAMTS10Q9H324 1103 aa0.04□□□□□ -2.4
RNU6-838P-201ENST00000363399 TMEM59LQ9UK28 342 aa0.04□□□□□ -2.4
RNU6-838P-201ENST00000363399 FSIP2Q5CZC0 6907 aa0.04□□□□□ -2.4
RNU6-838P-201ENST00000363399 SETD1BQ9UPS6 1966 aaKnown RBP0.03□□□□□ -2.4
RNU6-838P-201ENST00000363399 COL4A4P53420 1690 aaPredicted RBP0.03□□□□□ -2.4
RNU6-838P-201ENST00000363399 SH3D21A4FU49 640 aa0.03□□□□□ -2.4
RNU6-838P-201ENST00000363399 A6NHS1 94 aa0.03□□□□□ -2.4
RNU6-838P-201ENST00000363399 ZAR1LA6NP61 321 aa0.03□□□□□ -2.4
RNU6-838P-201ENST00000363399 PLA2G1BP04054 148 aaKnown RBP0.03□□□□□ -2.4
RNU6-838P-201ENST00000363399 RARAP10276 462 aa0.03□□□□□ -2.4
RNU6-838P-201ENST00000363399 CHGAP10645 457 aaKnown RBP0.03□□□□□ -2.4
RNU6-838P-201ENST00000363399 MAKP20794 623 aa0.03□□□□□ -2.4
RNU6-838P-201ENST00000363399 PRKD1Q15139 912 aaPredicted RBP0.03□□□□□ -2.4
RNU6-838P-201ENST00000363399 EXOSC6Q5RKV6 272 aaKnown RBP0.03□□□□□ -2.4
RNU6-838P-201ENST00000363399 HEATR6Q6AI08 1181 aaKnown RBP0.03□□□□□ -2.4
RNU6-838P-201ENST00000363399 LAIR1Q6GTX8 287 aa0.03□□□□□ -2.4
RNU6-838P-201ENST00000363399 CCDC125Q86Z20 511 aa0.03□□□□□ -2.4
RNU6-838P-201ENST00000363399 CARFQ8N187 725 aa0.03□□□□□ -2.4
RNU6-838P-201ENST00000363399 NLGN1Q8N2Q7 840 aa0.03□□□□□ -2.4
RNU6-838P-201ENST00000363399 RHPN1Q8TCX5 695 aa0.03□□□□□ -2.4
RNU6-838P-201ENST00000363399 IGDCC4Q8TDY8 1250 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms