RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 POLR3EQ9NVU0 708 aa18.62■□□□□ 0.57
IFT140-201ENST00000361339 hCG_1642624A0A1W2PR95 340 aa18.62■□□□□ 0.57
IFT140-201ENST00000361339 TDO2P48775 406 aa18.62■□□□□ 0.57
IFT140-201ENST00000361339 GNL2Q13823 731 aaKnown RBP18.62■□□□□ 0.57
IFT140-201ENST00000361339 FEZ2Q9UHY8 353 aaPredicted RBP18.62■□□□□ 0.57
IFT140-201ENST00000361339 TRIM66O15016 1216 aa18.61■□□□□ 0.57
IFT140-201ENST00000361339 GRIN1Q05586 938 aa18.61■□□□□ 0.57
IFT140-201ENST00000361339 MAP3K12Q12852 859 aa18.61■□□□□ 0.57
IFT140-201ENST00000361339 URI1O94763 535 aaPredicted RBP18.61■□□□□ 0.57
IFT140-201ENST00000361339 KLRK1P26718 216 aa18.61■□□□□ 0.57
IFT140-201ENST00000361339 GOLGA8FQ08AF8 430 aa18.61■□□□□ 0.57
IFT140-201ENST00000361339 GOLGA8DPQ0D2H9 430 aa18.61■□□□□ 0.57
IFT140-201ENST00000361339 UBXN4Q92575 508 aa18.61■□□□□ 0.57
IFT140-201ENST00000361339 LRP2BPQ9P2M1 347 aa18.61■□□□□ 0.57
IFT140-201ENST00000361339 DDX60Q8IY21 1712 aaKnown RBP18.61■□□□□ 0.57
IFT140-201ENST00000361339 ERFEQ4G0M1 354 aa18.6■□□□□ 0.57
IFT140-201ENST00000361339 E4F1Q66K89 784 aaPredicted RBP18.6■□□□□ 0.57
IFT140-201ENST00000361339 SHC4Q6S5L8 630 aa18.6■□□□□ 0.57
IFT140-201ENST00000361339 TMCO3Q6UWJ1 677 aa18.6■□□□□ 0.57
IFT140-201ENST00000361339 KIAA1468Q9P260 1216 aa18.6■□□□□ 0.57
IFT140-201ENST00000361339 JAG2Q9Y219 1238 aa18.6■□□□□ 0.57
IFT140-201ENST00000361339 SPATA31A1Q5TZJ5 1347 aa18.6■□□□□ 0.57
IFT140-201ENST00000361339 MINDY4BA8MYZ0 360 aa18.6■□□□□ 0.57
IFT140-201ENST00000361339 IARSP41252 1262 aaKnown RBP18.6■□□□□ 0.57
IFT140-201ENST00000361339 PAXIP1Q6ZW49 1069 aaPredicted RBP18.6■□□□□ 0.57
IFT140-201ENST00000361339 ANO10Q9NW15 660 aa18.6■□□□□ 0.57
IFT140-201ENST00000361339 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.6■□□□□ 0.57
IFT140-201ENST00000361339 CTAGE5O15320 804 aa18.6■□□□□ 0.57
IFT140-201ENST00000361339 FOXN1O15353 648 aa18.6■□□□□ 0.57
IFT140-201ENST00000361339 ATP2B1P20020 1258 aa18.6■□□□□ 0.57
IFT140-201ENST00000361339 MNS1Q8NEH6 495 aa18.6■□□□□ 0.57
IFT140-201ENST00000361339 KCNG4Q8TDN1 519 aa18.6■□□□□ 0.57
IFT140-201ENST00000361339 SLC12A7Q9Y666 1083 aa18.6■□□□□ 0.57
IFT140-201ENST00000361339 BTBD18B2RXH4 712 aa18.59■□□□□ 0.57
IFT140-201ENST00000361339 PRDM1O75626 825 aa18.59■□□□□ 0.57
IFT140-201ENST00000361339 YEATS4O95619 227 aa18.59■□□□□ 0.57
IFT140-201ENST00000361339 ATL3Q6DD88 541 aa18.59■□□□□ 0.57
IFT140-201ENST00000361339 NUP133Q8WUM0 1156 aa18.59■□□□□ 0.57
IFT140-201ENST00000361339 SMARCE1Q969G3 411 aa18.59■□□□□ 0.57
IFT140-201ENST00000361339 PPP1R13BQ96KQ4 1090 aa18.59■□□□□ 0.57
IFT140-201ENST00000361339 A0A1W2PQ27 194 aa18.59■□□□□ 0.57
IFT140-201ENST00000361339 A0A1W2PQ64 194 aa18.59■□□□□ 0.57
IFT140-201ENST00000361339 A0A1W2PQD8 194 aa18.59■□□□□ 0.57
IFT140-201ENST00000361339 IGHMBP2P38935 993 aaKnown RBP18.59■□□□□ 0.57
IFT140-201ENST00000361339 DYNLL1P63167 89 aaKnown RBP18.59■□□□□ 0.57
IFT140-201ENST00000361339 SLC4A8Q2Y0W8 1093 aa18.59■□□□□ 0.57
IFT140-201ENST00000361339 AKNAD1Q5T1N1 836 aa18.59■□□□□ 0.57
IFT140-201ENST00000361339 BRAPQ7Z569 592 aa18.59■□□□□ 0.57
IFT140-201ENST00000361339 IFNKQ9P0W0 207 aa18.59■□□□□ 0.57
IFT140-201ENST00000361339 RSPH14Q9UHP6 348 aa18.59■□□□□ 0.57
IFT140-201ENST00000361339 CYP7A1P22680 504 aa18.58■□□□□ 0.57
IFT140-201ENST00000361339 PNOCQ13519 176 aa18.58■□□□□ 0.57
IFT140-201ENST00000361339 PTPAQ15257 358 aa18.58■□□□□ 0.57
IFT140-201ENST00000361339 CCDC152Q4G0S7 254 aa18.58■□□□□ 0.57
IFT140-201ENST00000361339 FAM182BQ5T319 152 aa18.58■□□□□ 0.57
IFT140-201ENST00000361339 CEP57L1Q8IYX8 460 aa18.58■□□□□ 0.57
IFT140-201ENST00000361339 CHMP4CQ96CF2 233 aa18.58■□□□□ 0.57
IFT140-201ENST00000361339 ROBO1Q9Y6N7 1651 aa18.58■□□□□ 0.57
IFT140-201ENST00000361339 TULP2O00295 520 aa18.58■□□□□ 0.56
IFT140-201ENST00000361339 COL14A1Q05707 1796 aaKnown RBP18.58■□□□□ 0.56
IFT140-201ENST00000361339 NR5A1Q13285 461 aa18.58■□□□□ 0.56
IFT140-201ENST00000361339 SLC39A14Q15043 492 aa18.58■□□□□ 0.56
IFT140-201ENST00000361339 TEX35Q5T0J7 233 aa18.58■□□□□ 0.56
IFT140-201ENST00000361339 MFSD6Q6ZSS7 791 aa18.58■□□□□ 0.56
IFT140-201ENST00000361339 NBPF11Q86T75 865 aa18.58■□□□□ 0.56
IFT140-201ENST00000361339 MRFAP1L1Q96HT8 127 aa18.58■□□□□ 0.56
IFT140-201ENST00000361339 MAP3K14Q99558 947 aa18.58■□□□□ 0.56
IFT140-201ENST00000361339 LCMT1Q9UIC8 334 aa18.58■□□□□ 0.56
IFT140-201ENST00000361339 LRP5O75197 1615 aa18.58■□□□□ 0.56
IFT140-201ENST00000361339 COL1A1P02452 1464 aaPredicted RBP18.57■□□□□ 0.56
IFT140-201ENST00000361339 SLC3A2P08195 630 aaKnown RBP18.57■□□□□ 0.56
IFT140-201ENST00000361339 HSP90AA4PQ58FG1 418 aa18.57■□□□□ 0.56
IFT140-201ENST00000361339 SHISA4Q96DD7 197 aa18.57■□□□□ 0.56
IFT140-201ENST00000361339 CARD6Q9BX69 1037 aa18.57■□□□□ 0.56
IFT140-201ENST00000361339 FAM53CQ9NYF3 392 aa18.57■□□□□ 0.56
IFT140-201ENST00000361339 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.57■□□□□ 0.56
IFT140-201ENST00000361339 WDR19Q8NEZ3 1342 aa18.57■□□□□ 0.56
IFT140-201ENST00000361339 H2AFXP16104 143 aaPredicted RBP18.57■□□□□ 0.56
IFT140-201ENST00000361339 AEBP2Q6ZN18 517 aaPredicted RBP18.57■□□□□ 0.56
IFT140-201ENST00000361339 KLHL34Q8N239 644 aa18.57■□□□□ 0.56
IFT140-201ENST00000361339 OXER1Q8TDS5 423 aa18.57■□□□□ 0.56
IFT140-201ENST00000361339 FAM205CA6NFA0 338 aa18.57■□□□□ 0.56
IFT140-201ENST00000361339 ATP1A3P13637 1013 aa18.57■□□□□ 0.56
IFT140-201ENST00000361339 ZRSR1Q15695 479 aaKnown RBP18.57■□□□□ 0.56
IFT140-201ENST00000361339 ZNF384Q8TF68 577 aa18.57■□□□□ 0.56
IFT140-201ENST00000361339 TMEM87BQ96K49 555 aa18.57■□□□□ 0.56
IFT140-201ENST00000361339 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.57■□□□□ 0.56
IFT140-201ENST00000361339 XPO4Q9C0E2 1151 aaKnown RBP18.57■□□□□ 0.56
IFT140-201ENST00000361339 ZSWIM4Q9H7M6 989 aa18.57■□□□□ 0.56
IFT140-201ENST00000361339 RAI14Q9P0K7 980 aa18.57■□□□□ 0.56
IFT140-201ENST00000361339 LINC00116Q8NCU8 138 aa18.56■□□□□ 0.56
IFT140-201ENST00000361339 CELF1Q92879 486 aaKnown RBP18.56■□□□□ 0.56
IFT140-201ENST00000361339 NEMFO60524 1076 aa18.56■□□□□ 0.56
IFT140-201ENST00000361339 LMOD1P29536 600 aaPredicted RBP18.56■□□□□ 0.56
IFT140-201ENST00000361339 SKIDA1Q1XH10 827 aa18.56■□□□□ 0.56
IFT140-201ENST00000361339 SARM1Q6SZW1 724 aa18.56■□□□□ 0.56
IFT140-201ENST00000361339 SGMS1Q86VZ5 419 aa18.56■□□□□ 0.56
IFT140-201ENST00000361339 SFPQP23246 707 aaKnown RBP eCLIP18.55■□□□□ 0.56
IFT140-201ENST00000361339 TOB1P50616 345 aaPredicted RBP18.55■□□□□ 0.56
IFT140-201ENST00000361339 CMA1P23946 247 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 321.2 ms