RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 TERF1P54274 439 aa15.41■□□□□ 0.06
SQSTM1-201ENST00000360718 FKBP1AP62942 108 aaKnown RBP15.41■□□□□ 0.06
SQSTM1-201ENST00000360718 ST3GAL1Q11201 340 aa15.41■□□□□ 0.06
SQSTM1-201ENST00000360718 SLC4A8Q2Y0W8 1093 aa15.41■□□□□ 0.06
SQSTM1-201ENST00000360718 MFSD6Q6ZSS7 791 aa15.41■□□□□ 0.06
SQSTM1-201ENST00000360718 CYB5R4Q7L1T6 521 aa15.41■□□□□ 0.06
SQSTM1-201ENST00000360718 TGFBRAP1Q8WUH2 860 aa15.41■□□□□ 0.06
SQSTM1-201ENST00000360718 VPS33BQ9H267 617 aa15.41■□□□□ 0.06
SQSTM1-201ENST00000360718 SMC3Q9UQE7 1217 aa15.41■□□□□ 0.06
SQSTM1-201ENST00000360718 B4E1Z4 1266 aa15.41■□□□□ 0.06
SQSTM1-201ENST00000360718 USP17L8P0C7I0 530 aa15.41■□□□□ 0.06
SQSTM1-201ENST00000360718 ME3Q16798 604 aa15.41■□□□□ 0.06
SQSTM1-201ENST00000360718 CSPP1Q1MSJ5 1256 aa15.41■□□□□ 0.06
SQSTM1-201ENST00000360718 AKNAD1Q5T1N1 836 aa15.41■□□□□ 0.06
SQSTM1-201ENST00000360718 FAM184AQ8NB25 1140 aa15.41■□□□□ 0.06
SQSTM1-201ENST00000360718 KRT23Q9C075 422 aa15.41■□□□□ 0.06
SQSTM1-201ENST00000360718 WDR19Q8NEZ3 1342 aa15.4■□□□□ 0.06
SQSTM1-201ENST00000360718 PSMD14O00487 310 aa15.4■□□□□ 0.06
SQSTM1-201ENST00000360718 PDIA4P13667 645 aaKnown RBP15.4■□□□□ 0.06
SQSTM1-201ENST00000360718 AMOTL1Q8IY63 956 aa15.4■□□□□ 0.06
SQSTM1-201ENST00000360718 ANAPC4Q9UJX5 808 aa15.4■□□□□ 0.06
SQSTM1-201ENST00000360718 RRP9O43818 475 aaKnown RBP15.4■□□□□ 0.06
SQSTM1-201ENST00000360718 UVSSAQ2YD98 709 aa15.4■□□□□ 0.06
SQSTM1-201ENST00000360718 APOBEC3HQ6NTF7 200 aaKnown RBP15.4■□□□□ 0.06
SQSTM1-201ENST00000360718 MAPKAPK5Q8IW41 473 aa15.4■□□□□ 0.06
SQSTM1-201ENST00000360718 STAG1Q8WVM7 1258 aa15.4■□□□□ 0.06
SQSTM1-201ENST00000360718 BRF1Q92994 677 aa15.4■□□□□ 0.06
SQSTM1-201ENST00000360718 AGXT2Q9BYV1 514 aa15.4■□□□□ 0.06
SQSTM1-201ENST00000360718 ARPP21Q9UBL0 812 aaPredicted RBP15.4■□□□□ 0.06
SQSTM1-201ENST00000360718 ZKSCAN5Q9Y2L8 839 aa15.4■□□□□ 0.06
SQSTM1-201ENST00000360718 PRC1O43663 620 aa15.39■□□□□ 0.05
SQSTM1-201ENST00000360718 STX6O43752 255 aa15.39■□□□□ 0.05
SQSTM1-201ENST00000360718 SLC3A2P08195 630 aaKnown RBP15.39■□□□□ 0.05
SQSTM1-201ENST00000360718 CRKP46108 304 aa15.39■□□□□ 0.05
SQSTM1-201ENST00000360718 TEX11Q8IYF3 940 aa15.39■□□□□ 0.05
SQSTM1-201ENST00000360718 TOMM22Q9NS69 142 aa15.39■□□□□ 0.05
SQSTM1-201ENST00000360718 MCM9Q9NXL9 1143 aa15.39■□□□□ 0.05
SQSTM1-201ENST00000360718 ZNRF3Q9ULT6 936 aa15.39■□□□□ 0.05
SQSTM1-201ENST00000360718 ZBTB12Q9Y330 459 aaPredicted RBP15.39■□□□□ 0.05
SQSTM1-201ENST00000360718 HHIPL2Q6UWX4 724 aa15.38■□□□□ 0.05
SQSTM1-201ENST00000360718 NIM1KQ8IY84 436 aa15.38■□□□□ 0.05
SQSTM1-201ENST00000360718 NECAB1Q8N987 351 aa15.38■□□□□ 0.05
SQSTM1-201ENST00000360718 TEKT1Q969V4 418 aa15.38■□□□□ 0.05
SQSTM1-201ENST00000360718 VIL1P09327 827 aaKnown RBP15.38■□□□□ 0.05
SQSTM1-201ENST00000360718 PCP11498 1178 aaKnown RBP15.38■□□□□ 0.05
SQSTM1-201ENST00000360718 CXCL9Q07325 125 aa15.38■□□□□ 0.05
SQSTM1-201ENST00000360718 CCDC183Q5T5S1 534 aa15.38■□□□□ 0.05
SQSTM1-201ENST00000360718 FBXL16Q8N461 479 aa15.38■□□□□ 0.05
SQSTM1-201ENST00000360718 GMLQ99445 158 aa15.38■□□□□ 0.05
SQSTM1-201ENST00000360718 SAP30BPQ9UHR5 308 aaKnown RBP15.38■□□□□ 0.05
SQSTM1-201ENST00000360718 FLT1P17948 1338 aa15.38■□□□□ 0.05
SQSTM1-201ENST00000360718 KDM4AO75164 1064 aa15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 SYT1P21579 422 aa15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 UBE2HP62256 183 aa15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 APOBRQ0VD83 1088 aa15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 HSP90AA2PQ14568 343 aaPredicted RBP15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 SBK1Q52WX2 424 aa15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 CDC42EP5Q6NZY7 148 aa15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 RSBN1LQ6PCB5 846 aaPredicted RBP15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 CCDC83Q8IWF9 413 aa15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 SYT17Q9BSW7 474 aa15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 DDX4Q9NQI0 724 aaKnown RBP15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 ZSWIM5Q9P217 1185 aa15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 MYH8P13535 1937 aa15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 LTBP3Q9NS15 1303 aa15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 GADD45BO75293 160 aaPredicted RBP15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 PRDM1O75626 825 aa15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 WDHD1O75717 1129 aaPredicted RBP15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 FOXD4L6Q3SYB3 417 aaPredicted RBP15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 RRP12Q5JTH9 1297 aaKnown RBP15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 C12orf60Q5U649 245 aa15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 FOXD4L3Q6VB84 417 aaPredicted RBP15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 RNF214Q8ND24 703 aa15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 CHMP4CQ96CF2 233 aa15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 ZDHHC15Q96MV8 337 aa15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 SENP2Q9HC62 589 aa15.37■□□□□ 0.05
SQSTM1-201ENST00000360718 F13A1P00488 732 aa15.36■□□□□ 0.05
SQSTM1-201ENST00000360718 PLCD1P51178 756 aa15.36■□□□□ 0.05
SQSTM1-201ENST00000360718 STK3Q13188 491 aa15.36■□□□□ 0.05
SQSTM1-201ENST00000360718 TMEM87BQ96K49 555 aa15.36■□□□□ 0.05
SQSTM1-201ENST00000360718 GDPD2Q9HCC8 539 aa15.36■□□□□ 0.05
SQSTM1-201ENST00000360718 USP40Q9NVE5 1235 aa15.36■□□□□ 0.05
SQSTM1-201ENST00000360718 NAP1L2Q9ULW6 460 aaPredicted RBP15.36■□□□□ 0.05
SQSTM1-201ENST00000360718 FGRP09769 529 aa15.36■□□□□ 0.05
SQSTM1-201ENST00000360718 SART3Q15020 963 aaKnown RBP15.36■□□□□ 0.05
SQSTM1-201ENST00000360718 DYNLL2Q96FJ2 89 aa15.36■□□□□ 0.05
SQSTM1-201ENST00000360718 MRIQ9BWK5 157 aa15.36■□□□□ 0.05
SQSTM1-201ENST00000360718 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.36■□□□□ 0.057e-6■■□□□ 13.7
SQSTM1-201ENST00000360718 PTMAP06454 111 aaKnown RBP15.35■□□□□ 0.05
SQSTM1-201ENST00000360718 CACNB3P54284 484 aa15.35■□□□□ 0.05
SQSTM1-201ENST00000360718 HDLBPQ00341 1268 aaKnown RBP15.35■□□□□ 0.05
SQSTM1-201ENST00000360718 PDE4BQ07343 736 aa15.35■□□□□ 0.05
SQSTM1-201ENST00000360718 NFIAQ12857 509 aa15.35■□□□□ 0.05
SQSTM1-201ENST00000360718 PICALMQ13492 652 aa15.35■□□□□ 0.05
SQSTM1-201ENST00000360718 ESR2Q92731 530 aa15.35■□□□□ 0.05
SQSTM1-201ENST00000360718 SERPINA10Q9UK55 444 aa15.35■□□□□ 0.05
SQSTM1-201ENST00000360718 MYO3BQ8WXR4 1341 aa15.35■□□□□ 0.05
SQSTM1-201ENST00000360718 RBM5P52756 815 aaKnown RBP eCLIP15.34■□□□□ 0.05
SQSTM1-201ENST00000360718 IGDCC4Q8TDY8 1250 aa15.34■□□□□ 0.05
SQSTM1-201ENST00000360718 ZNF274Q96GC6 653 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms