RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 SZT2Q5T011 3432 aa18.55■□□□□ 0.56
GDPD3-201ENST00000360688 TNPO2O14787 897 aaKnown RBP18.54■□□□□ 0.56
GDPD3-201ENST00000360688 ELNP15502 786 aa18.54■□□□□ 0.56
GDPD3-201ENST00000360688 MCAMP43121 646 aa18.54■□□□□ 0.56
GDPD3-201ENST00000360688 G3BP1Q13283 466 aaKnown RBP eCLIP18.54■□□□□ 0.56
GDPD3-201ENST00000360688 IRF5Q13568 498 aa18.54■□□□□ 0.56
GDPD3-201ENST00000360688 ATF7IPQ6VMQ6 1270 aa18.54■□□□□ 0.56
GDPD3-201ENST00000360688 ANKRD13CQ8N6S4 541 aa18.54■□□□□ 0.56
GDPD3-201ENST00000360688 PXYLP1Q8TE99 480 aa18.54■□□□□ 0.56
GDPD3-201ENST00000360688 U2AF1L4Q8WU68 220 aaKnown RBP18.54■□□□□ 0.56
GDPD3-201ENST00000360688 CDK5RAP2Q96SN8 1893 aa18.54■□□□□ 0.56
GDPD3-201ENST00000360688 MYO5AQ9Y4I1 1855 aaKnown RBP18.54■□□□□ 0.56
GDPD3-201ENST00000360688 SIPA1L1O43166 1804 aa18.53■□□□□ 0.56
GDPD3-201ENST00000360688 CCER2I3L3R5 266 aa18.53■□□□□ 0.56
GDPD3-201ENST00000360688 SPP2Q13103 211 aa18.53■□□□□ 0.56
GDPD3-201ENST00000360688 PROCA1Q8NCQ7 364 aaPredicted RBP18.53■□□□□ 0.56
GDPD3-201ENST00000360688 FRAT1Q92837 279 aaPredicted RBP18.53■□□□□ 0.56
GDPD3-201ENST00000360688 PNMA3Q9UL41 463 aa18.53■□□□□ 0.56
GDPD3-201ENST00000360688 BCAR3O75815 825 aa18.52■□□□□ 0.56
GDPD3-201ENST00000360688 SGPL1O95470 568 aa18.52■□□□□ 0.56
GDPD3-201ENST00000360688 INHAP05111 366 aa18.52■□□□□ 0.56
GDPD3-201ENST00000360688 UQCRFS1P1P0C7P4 283 aa18.52■□□□□ 0.56
GDPD3-201ENST00000360688 RRP1BQ14684 758 aaKnown RBP18.52■□□□□ 0.56
GDPD3-201ENST00000360688 FAM110CQ1W6H9 321 aa18.52■□□□□ 0.56
GDPD3-201ENST00000360688 CHRDL2Q6WN34 429 aa18.52■□□□□ 0.56
GDPD3-201ENST00000360688 TEX11Q8IYF3 940 aa18.52■□□□□ 0.56
GDPD3-201ENST00000360688 ZNF280CQ8ND82 737 aa18.52■□□□□ 0.56
GDPD3-201ENST00000360688 CLUAP1Q96AJ1 413 aa18.52■□□□□ 0.56
GDPD3-201ENST00000360688 HTATIP2Q9BUP3 242 aa18.52■□□□□ 0.56
GDPD3-201ENST00000360688 MAST2Q6P0Q8 1798 aa18.52■□□□□ 0.55
GDPD3-201ENST00000360688 FOCADQ5VW36 1801 aa18.51■□□□□ 0.55
GDPD3-201ENST00000360688 FARP2O94887 1054 aaPredicted RBP18.51■□□□□ 0.55
GDPD3-201ENST00000360688 CAP2P40123 477 aa18.51■□□□□ 0.55
GDPD3-201ENST00000360688 SH3RF3Q8TEJ3 882 aaPredicted RBP18.51■□□□□ 0.55
GDPD3-201ENST00000360688 LRP2BPQ9P2M1 347 aa18.51■□□□□ 0.55
GDPD3-201ENST00000360688 HMGCS2P54868 508 aa18.5■□□□□ 0.55
GDPD3-201ENST00000360688 COA7Q96BR5 231 aa18.5■□□□□ 0.55
GDPD3-201ENST00000360688 TBC1D2Q9BYX2 928 aa18.5■□□□□ 0.55
GDPD3-201ENST00000360688 HERC5Q9UII4 1024 aaKnown RBP18.5■□□□□ 0.55
GDPD3-201ENST00000360688 USP17L5A8MUK1 530 aa18.49■□□□□ 0.55
GDPD3-201ENST00000360688 NOL10Q9BSC4 688 aaKnown RBP18.49■□□□□ 0.55
GDPD3-201ENST00000360688 GPR108Q9NPR9 543 aa18.49■□□□□ 0.55
GDPD3-201ENST00000360688 SNRKQ9NRH2 765 aa18.49■□□□□ 0.55
GDPD3-201ENST00000360688 RBM27Q9P2N5 1060 aaKnown RBP18.49■□□□□ 0.55
GDPD3-201ENST00000360688 TAOK2Q9UL54 1235 aa18.49■□□□□ 0.55
GDPD3-201ENST00000360688 GCLCP48506 637 aaPredicted RBP18.49■□□□□ 0.55
GDPD3-201ENST00000360688 PABPC4Q13310 644 aaKnown RBP eCLIP18.49■□□□□ 0.55
GDPD3-201ENST00000360688 POLA2Q14181 598 aa18.49■□□□□ 0.55
GDPD3-201ENST00000360688 SH3D19Q5HYK7 790 aa18.49■□□□□ 0.55
GDPD3-201ENST00000360688 NAA16Q6N069 864 aaPredicted RBP18.49■□□□□ 0.55
GDPD3-201ENST00000360688 TMEM57Q8N5G2 664 aa18.49■□□□□ 0.55
GDPD3-201ENST00000360688 DEFB118Q96PH6 123 aa18.49■□□□□ 0.55
GDPD3-201ENST00000360688 ASCC2Q9H1I8 757 aaPredicted RBP18.49■□□□□ 0.55
GDPD3-201ENST00000360688 PAK6Q9NQU5 681 aaPredicted RBP18.49■□□□□ 0.55
GDPD3-201ENST00000360688 AATFQ9NY61 560 aaKnown RBP eCLIP18.49■□□□□ 0.55
GDPD3-201ENST00000360688 PI4KBQ9UBF8 816 aa18.49■□□□□ 0.55
GDPD3-201ENST00000360688 ALPK3Q96L96 1907 aa18.48■□□□□ 0.55
GDPD3-201ENST00000360688 TFRCP02786 760 aaKnown RBP18.48■□□□□ 0.55
GDPD3-201ENST00000360688 PPP4CP60510 307 aa18.48■□□□□ 0.55
GDPD3-201ENST00000360688 TNNI3KQ59H18 835 aa18.48■□□□□ 0.55
GDPD3-201ENST00000360688 TTC39AQ5SRH9 613 aa18.48■□□□□ 0.55
GDPD3-201ENST00000360688 DBNDD2Q9BQY9 259 aa18.48■□□□□ 0.55
GDPD3-201ENST00000360688 DHX36Q9H2U1 1008 aaKnown RBP18.48■□□□□ 0.55
GDPD3-201ENST00000360688 AS3MTQ9HBK9 375 aa18.48■□□□□ 0.55
GDPD3-201ENST00000360688 NR2E3Q9Y5X4 410 aa18.48■□□□□ 0.55
GDPD3-201ENST00000360688 FPGT-TNNI3KV9GXZ4 949 aa18.48■□□□□ 0.55
GDPD3-201ENST00000360688 PLXNB2O15031 1838 aa18.47■□□□□ 0.55
GDPD3-201ENST00000360688 BAG3O95817 575 aa18.47■□□□□ 0.55
GDPD3-201ENST00000360688 CYP2E1P05181 493 aaPredicted RBP18.47■□□□□ 0.55
GDPD3-201ENST00000360688 PLCG2P16885 1265 aa18.47■□□□□ 0.55
GDPD3-201ENST00000360688 CAPN2P17655 700 aa18.47■□□□□ 0.55
GDPD3-201ENST00000360688 CCDC158Q5M9N0 1113 aa18.47■□□□□ 0.55
GDPD3-201ENST00000360688 ADGRA1Q86SQ6 560 aa18.47■□□□□ 0.55
GDPD3-201ENST00000360688 SSH3Q8TE77 659 aa18.47■□□□□ 0.55
GDPD3-201ENST00000360688 WDR18Q9BV38 432 aa18.47■□□□□ 0.55
GDPD3-201ENST00000360688 PRO3102Q9H379 93 aa18.47■□□□□ 0.55
GDPD3-201ENST00000360688 ZBTB7BO15156 539 aaPredicted RBP18.46■□□□□ 0.55
GDPD3-201ENST00000360688 JAG1P78504 1218 aa18.46■□□□□ 0.55
GDPD3-201ENST00000360688 ATP8B2P98198 1209 aa18.46■□□□□ 0.55
GDPD3-201ENST00000360688 ZKSCAN2Q63HK3 967 aa18.46■□□□□ 0.55
GDPD3-201ENST00000360688 METTL16Q86W50 562 aaKnown RBP18.46■□□□□ 0.55
GDPD3-201ENST00000360688 MAPKAPK5Q8IW41 473 aa18.46■□□□□ 0.55
GDPD3-201ENST00000360688 TGFBRAP1Q8WUH2 860 aa18.46■□□□□ 0.55
GDPD3-201ENST00000360688 CRISPLD2Q9H0B8 497 aa18.46■□□□□ 0.55
GDPD3-201ENST00000360688 DNAJC18Q9H819 358 aa18.46■□□□□ 0.55
GDPD3-201ENST00000360688 GJD2Q9UKL4 321 aa18.46■□□□□ 0.55
GDPD3-201ENST00000360688 ASNSP08243 561 aa18.45■□□□□ 0.54
GDPD3-201ENST00000360688 OS9Q13438 667 aaPredicted RBP18.45■□□□□ 0.54
GDPD3-201ENST00000360688 MTMR2Q13614 643 aa18.45■□□□□ 0.54
GDPD3-201ENST00000360688 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.45■□□□□ 0.54
GDPD3-201ENST00000360688 FLT1P17948 1338 aa18.45■□□□□ 0.54
GDPD3-201ENST00000360688 MYH1P12882 1939 aa18.44■□□□□ 0.54
GDPD3-201ENST00000360688 SURF6O75683 361 aaKnown RBP18.44■□□□□ 0.54
GDPD3-201ENST00000360688 HMGCRP04035 888 aa18.44■□□□□ 0.54
GDPD3-201ENST00000360688 BACE1P56817 501 aa18.44■□□□□ 0.54
GDPD3-201ENST00000360688 FOXP4Q8IVH2 680 aaPredicted RBP18.44■□□□□ 0.54
GDPD3-201ENST00000360688 ZNF512BQ96KM6 892 aaPredicted RBP18.44■□□□□ 0.54
GDPD3-201ENST00000360688 MORF4L1Q9UBU8 362 aa18.44■□□□□ 0.54
GDPD3-201ENST00000360688 PALD1Q9ULE6 856 aa18.44■□□□□ 0.54
GDPD3-201ENST00000360688 EVI5O60447 810 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms