RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 CSPG5O95196 566 aa9.85□□□□□ -0.83
CTNND1-201ENST00000358694 TBC1D8BQ0IIM8 1120 aa9.85□□□□□ -0.83
CTNND1-201ENST00000358694 SLC39A6Q13433 755 aa9.85□□□□□ -0.83
CTNND1-201ENST00000358694 HDXQ7Z353 690 aa9.85□□□□□ -0.83
CTNND1-201ENST00000358694 USP48Q86UV5 1035 aa9.85□□□□□ -0.83
CTNND1-201ENST00000358694 CTAGE3PQ8IX95 158 aa9.85□□□□□ -0.83
CTNND1-201ENST00000358694 KIF9Q9HAQ2 790 aa9.85□□□□□ -0.83
CTNND1-201ENST00000358694 PPP1R2P41236 205 aa9.85□□□□□ -0.83
CTNND1-201ENST00000358694 CASP2P42575 452 aa9.85□□□□□ -0.83
CTNND1-201ENST00000358694 NOLC1Q14978 699 aaKnown RBP eCLIP9.85□□□□□ -0.83
CTNND1-201ENST00000358694 ANKRD20A3Q5VUR7 823 aa9.85□□□□□ -0.83
CTNND1-201ENST00000358694 SCYL2Q6P3W7 929 aa9.85□□□□□ -0.83
CTNND1-201ENST00000358694 MYCT1Q8N699 235 aa9.85□□□□□ -0.83
CTNND1-201ENST00000358694 RNF217Q8TC41 542 aa9.85□□□□□ -0.83
CTNND1-201ENST00000358694 TBC1D2Q9BYX2 928 aa9.85□□□□□ -0.83
CTNND1-201ENST00000358694 PRKAG2Q9UGJ0 569 aa9.85□□□□□ -0.83
CTNND1-201ENST00000358694 MSH6P52701 1360 aa9.85□□□□□ -0.83
CTNND1-201ENST00000358694 PLEKHH2Q8IVE3 1493 aa9.85□□□□□ -0.83
CTNND1-201ENST00000358694 GNPATO15228 680 aa9.85□□□□□ -0.83
CTNND1-201ENST00000358694 APOBRQ0VD83 1088 aa9.85□□□□□ -0.83
CTNND1-201ENST00000358694 ZNF277Q9NRM2 450 aaPredicted RBP9.85□□□□□ -0.83
CTNND1-201ENST00000358694 IFNKQ9P0W0 207 aa9.85□□□□□ -0.83
CTNND1-201ENST00000358694 SPECC1L-ADORA2AF8WAN1 911 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 STK25O00506 426 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 YWHAEP62258 255 aaKnown RBP9.84□□□□□ -0.83
CTNND1-201ENST00000358694 PPARDQ03181 441 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 PPP2R5AQ15172 486 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 SYT10Q6XYQ8 523 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 PDZD8Q8NEN9 1154 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 DDX21Q9NR30 783 aaKnown RBP eCLIP9.84□□□□□ -0.834e-6■□□□□ 11.2
CTNND1-201ENST00000358694 MYO1AQ9UBC5 1043 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 AKR1B15C9JRZ8 316 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-201ENST00000358694 WASLO00401 505 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-201ENST00000358694 GNL1P36915 607 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-201ENST00000358694 TXKP42681 527 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 GPR162Q16538 588 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 ZNF449Q6P9G9 518 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 CCDC105Q8IYK2 499 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 CXorf38Q8TB03 319 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 RSAD2Q8WXG1 361 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 SDCCAG3Q96C92 435 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 HDAC11Q96DB2 347 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 EXOC3O60645 756 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 TNNI1P19237 187 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 COG7P83436 770 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 USH1GQ495M9 461 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.84□□□□□ -0.83
CTNND1-201ENST00000358694 CCDC93Q567U6 631 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 RYBPQ8N488 228 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-201ENST00000358694 CNBD1Q8NA66 436 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 FAM8A1Q9UBU6 413 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 NMIQ13287 307 aaPredicted RBP9.84□□□□□ -0.83
CTNND1-201ENST00000358694 FAM71BQ8TC56 605 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 TRPC6Q9Y210 931 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 STK24Q9Y6E0 443 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 A0A1B0GUA9 196 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 DNM1Q05193 864 aaKnown RBP9.84□□□□□ -0.83
CTNND1-201ENST00000358694 PALM2Q8IXS6 379 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 LMCD1Q9NZU5 365 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 PNMA2Q9UL42 364 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 DENND2AQ9ULE3 1009 aa9.84□□□□□ -0.83
CTNND1-201ENST00000358694 PRG4Q92954 1404 aaPredicted RBP9.83□□□□□ -0.84
CTNND1-201ENST00000358694 ARHGAP42A6NI28 874 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 SAT1P21673 171 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 PHEXP78562 749 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 B4GALNT4Q76KP1 1039 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 SESTD1Q86VW0 696 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 PAGR1Q9BTK6 254 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 ATAD2BQ9ULI0 1458 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 HNRNPCL2B2RXH8 293 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 HNRNPCL1O60812 293 aaKnown RBP9.83□□□□□ -0.84
CTNND1-201ENST00000358694 SETSIPP0DME0 302 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 DCLK2Q8N568 766 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 SMARCA4P51532 1647 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 GRM8O00222 908 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 BCRP11274 1271 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 DBN1Q16643 649 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 CCDC38Q502W7 563 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 C10orf67Q8IYJ2 551 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 MMS19Q96T76 1030 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 VPS16Q9H269 839 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 MLXIPQ9HAP2 919 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 XAB2Q9HCS7 855 aaKnown RBP9.83□□□□□ -0.84
CTNND1-201ENST00000358694 ANGPTL3Q9Y5C1 460 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 FAM83GA6ND36 823 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 ATF7P17544 494 aaPredicted RBP9.83□□□□□ -0.84
CTNND1-201ENST00000358694 UIMC1Q96RL1 719 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 RTEL1Q9NZ71 1219 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 ANAPC5Q9UJX4 755 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 C9orf84Q5VXU9 1444 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 CEP104O60308 925 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 TRIM27P14373 513 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 SF3A3Q12874 501 aaKnown RBP eCLIP9.83□□□□□ -0.842e-7■■■□□ 14.9
CTNND1-201ENST00000358694 PIK3AP1Q6ZUJ8 805 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 AFAP1L1Q8TED9 768 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 MRPL46Q9H2W6 279 aaKnown RBP9.83□□□□□ -0.84
CTNND1-201ENST00000358694 TBC1D7Q9P0N9 293 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 SFMBT1Q9UHJ3 866 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 SUFUQ9UMX1 484 aa9.83□□□□□ -0.84
CTNND1-201ENST00000358694 TYW5A2RUC4 315 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms