RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 PLEKHA8P1O95397 391 aa20.51■□□□□ 0.87
NPAS3-202ENST00000356141 PLCD1P51178 756 aa20.51■□□□□ 0.87
NPAS3-202ENST00000356141 DCAF8Q5TAQ9 597 aa20.51■□□□□ 0.87
NPAS3-202ENST00000356141 KRT40Q6A162 431 aa20.51■□□□□ 0.87
NPAS3-202ENST00000356141 TICAM2Q86XR7 235 aa20.51■□□□□ 0.87
NPAS3-202ENST00000356141 FBXO18Q8NFZ0 1043 aa20.51■□□□□ 0.87
NPAS3-202ENST00000356141 TDRD7Q8NHU6 1098 aaKnown RBP20.51■□□□□ 0.87
NPAS3-202ENST00000356141 ESR2Q92731 530 aa20.51■□□□□ 0.87
NPAS3-202ENST00000356141 SCAND2PQ9GZW5 306 aaPredicted RBP20.51■□□□□ 0.87
NPAS3-202ENST00000356141 GOLPH3LQ9H4A5 285 aa20.51■□□□□ 0.87
NPAS3-202ENST00000356141 KIF3AQ9Y496 699 aa20.51■□□□□ 0.87
NPAS3-202ENST00000356141 PARP3Q9Y6F1 533 aa20.51■□□□□ 0.87
NPAS3-202ENST00000356141 COL24A1Q17RW2 1714 aa20.51■□□□□ 0.87
NPAS3-202ENST00000356141 A0A1B0GUL6 1792 aa20.51■□□□□ 0.87
NPAS3-202ENST00000356141 TSPY2A6NKD2 308 aa20.51■□□□□ 0.87
NPAS3-202ENST00000356141 EVCP57679 992 aa20.51■□□□□ 0.87
NPAS3-202ENST00000356141 SF3A1Q15459 793 aaKnown RBP20.51■□□□□ 0.87
NPAS3-202ENST00000356141 IFIT1BQ5T764 474 aaKnown RBP20.51■□□□□ 0.87
NPAS3-202ENST00000356141 PCDHAC2Q9Y5I4 1007 aa20.51■□□□□ 0.87
NPAS3-202ENST00000356141 A0A1B0GVL5 298 aa20.5■□□□□ 0.87
NPAS3-202ENST00000356141 USP17L3A6NCW0 530 aa20.5■□□□□ 0.87
NPAS3-202ENST00000356141 USP17L4A6NCW7 530 aa20.5■□□□□ 0.87
NPAS3-202ENST00000356141 BTDP43251 543 aa20.5■□□□□ 0.87
NPAS3-202ENST00000356141 USP17L1Q7RTZ2 530 aa20.5■□□□□ 0.87
NPAS3-202ENST00000356141 AKT1S1Q96B36 256 aa20.5■□□□□ 0.87
NPAS3-202ENST00000356141 ZNF831Q5JPB2 1677 aa20.5■□□□□ 0.87
NPAS3-202ENST00000356141 CSPP1Q1MSJ5 1256 aa20.5■□□□□ 0.87
NPAS3-202ENST00000356141 ILDR2Q71H61 639 aa20.5■□□□□ 0.87
NPAS3-202ENST00000356141 NTRK3Q16288 839 aa20.49■□□□□ 0.87
NPAS3-202ENST00000356141 SPECC1Q5M775 1068 aa20.49■□□□□ 0.87
NPAS3-202ENST00000356141 CCAR1Q8IX12 1150 aaKnown RBP20.49■□□□□ 0.87
NPAS3-202ENST00000356141 CPVLQ9H3G5 476 aa20.49■□□□□ 0.87
NPAS3-202ENST00000356141 RRAGDQ9NQL2 400 aaPredicted RBP20.49■□□□□ 0.87
NPAS3-202ENST00000356141 ANP32BQ92688 251 aaKnown RBP20.49■□□□□ 0.87
NPAS3-202ENST00000356141 TRIM44Q96DX7 344 aaPredicted RBP20.49■□□□□ 0.87
NPAS3-202ENST00000356141 NAP1L5Q96NT1 182 aaPredicted RBP20.49■□□□□ 0.87
NPAS3-202ENST00000356141 ZSCAN10Q96SZ4 725 aaPredicted RBP20.49■□□□□ 0.87
NPAS3-202ENST00000356141 RNF41Q9H4P4 317 aaPredicted RBP20.49■□□□□ 0.87
NPAS3-202ENST00000356141 ZSCAN16Q9H4T2 348 aaPredicted RBP20.49■□□□□ 0.87
NPAS3-202ENST00000356141 SSRP1Q08945 709 aaKnown RBP20.49■□□□□ 0.87
NPAS3-202ENST00000356141 NR5A1Q13285 461 aa20.49■□□□□ 0.87
NPAS3-202ENST00000356141 STK38Q15208 465 aa20.49■□□□□ 0.87
NPAS3-202ENST00000356141 NUP62CLQ9H1M0 184 aa20.49■□□□□ 0.87
NPAS3-202ENST00000356141 USP25Q9UHP3 1055 aa20.49■□□□□ 0.87
NPAS3-202ENST00000356141 VEGFAP15692 232 aaPredicted RBP20.48■□□□□ 0.87
NPAS3-202ENST00000356141 CACNB3P54284 484 aa20.48■□□□□ 0.87
NPAS3-202ENST00000356141 TNMDQ9H2S6 317 aa20.48■□□□□ 0.87
NPAS3-202ENST00000356141 BTBD18B2RXH4 712 aa20.48■□□□□ 0.87
NPAS3-202ENST00000356141 SRGNP10124 158 aa20.48■□□□□ 0.87
NPAS3-202ENST00000356141 CPLX2Q6PUV4 134 aaKnown RBP20.48■□□□□ 0.87
NPAS3-202ENST00000356141 WDR66Q8TBY9 1149 aa20.48■□□□□ 0.87
NPAS3-202ENST00000356141 VPS54Q9P1Q0 977 aa20.48■□□□□ 0.87
NPAS3-202ENST00000356141 KIF23Q02241 960 aaPredicted RBP20.47■□□□□ 0.87
NPAS3-202ENST00000356141 DPP8Q6V1X1 898 aaPredicted RBP20.47■□□□□ 0.87
NPAS3-202ENST00000356141 NLGN1Q8N2Q7 840 aa20.47■□□□□ 0.87
NPAS3-202ENST00000356141 FANCBQ8NB91 859 aa20.47■□□□□ 0.87
NPAS3-202ENST00000356141 OXER1Q8TDS5 423 aa20.47■□□□□ 0.87
NPAS3-202ENST00000356141 CFAP45Q9UL16 551 aa20.47■□□□□ 0.87
NPAS3-202ENST00000356141 FAM205CA6NFA0 338 aa20.47■□□□□ 0.87
NPAS3-202ENST00000356141 SEMA3EO15041 775 aa20.47■□□□□ 0.87
NPAS3-202ENST00000356141 TFAP4Q01664 338 aa20.47■□□□□ 0.87
NPAS3-202ENST00000356141 ISM2Q6H9L7 571 aa20.47■□□□□ 0.87
NPAS3-202ENST00000356141 CLEC10AQ8IUN9 316 aa20.47■□□□□ 0.87
NPAS3-202ENST00000356141 ZC3H12CQ9C0D7 883 aaKnown RBP20.47■□□□□ 0.87
NPAS3-202ENST00000356141 MKNK2Q9HBH9 465 aa20.47■□□□□ 0.87
NPAS3-202ENST00000356141 MRVI1Q9Y6F6 885 aa20.47■□□□□ 0.87
NPAS3-202ENST00000356141 EIF6P56537 245 aaKnown RBP20.46■□□□□ 0.87
NPAS3-202ENST00000356141 FSIP1Q8NA03 581 aa20.46■□□□□ 0.87
NPAS3-202ENST00000356141 STX8Q9UNK0 236 aa20.46■□□□□ 0.87
NPAS3-202ENST00000356141 BBOX1O75936 387 aa20.46■□□□□ 0.87
NPAS3-202ENST00000356141 ATP2B4P23634 1241 aa20.46■□□□□ 0.87
NPAS3-202ENST00000356141 TRIM29Q14134 588 aa20.46■□□□□ 0.87
NPAS3-202ENST00000356141 SGMS1Q86VZ5 419 aa20.46■□□□□ 0.87
NPAS3-202ENST00000356141 TEX11Q8IYF3 940 aa20.46■□□□□ 0.87
NPAS3-202ENST00000356141 NOL10Q9BSC4 688 aaKnown RBP20.46■□□□□ 0.87
NPAS3-202ENST00000356141 BRIP1Q9BX63 1249 aa20.46■□□□□ 0.87
NPAS3-202ENST00000356141 PCDHA7Q9UN72 937 aa20.46■□□□□ 0.87
NPAS3-202ENST00000356141 V9GY48 417 aaPredicted RBP20.46■□□□□ 0.87
NPAS3-202ENST00000356141 LIFRP42702 1097 aa20.45■□□□□ 0.86
NPAS3-202ENST00000356141 NOM1Q5C9Z4 860 aaKnown RBP20.45■□□□□ 0.86
NPAS3-202ENST00000356141 MYSM1Q5VVJ2 828 aa20.45■□□□□ 0.86
NPAS3-202ENST00000356141 IQCA1Q86XH1 822 aa20.45■□□□□ 0.86
NPAS3-202ENST00000356141 C2CD5Q86YS7 1000 aa20.45■□□□□ 0.86
NPAS3-202ENST00000356141 GOLGA8HP0CJ92 632 aa20.45■□□□□ 0.86
NPAS3-202ENST00000356141 SPTY2D1Q68D10 685 aaPredicted RBP20.45■□□□□ 0.86
NPAS3-202ENST00000356141 CLIC6Q96NY7 704 aa20.45■□□□□ 0.86
NPAS3-202ENST00000356141 SEC23AQ15436 765 aa20.45■□□□□ 0.86
NPAS3-202ENST00000356141 CHD4Q14839 1912 aa20.44■□□□□ 0.86
NPAS3-202ENST00000356141 FBXL16Q8N461 479 aa20.44■□□□□ 0.86
NPAS3-202ENST00000356141 CERS5Q8N5B7 392 aa20.44■□□□□ 0.86
NPAS3-202ENST00000356141 NBPF11Q86T75 865 aa20.44■□□□□ 0.86
NPAS3-202ENST00000356141 KIAA0825Q8IV33 1275 aa20.44■□□□□ 0.86
NPAS3-202ENST00000356141 PLSCR1O15162 318 aa20.43■□□□□ 0.86
NPAS3-202ENST00000356141 LUZP1Q86V48 1076 aa20.43■□□□□ 0.86
NPAS3-202ENST00000356141 SHISA4Q96DD7 197 aa20.43■□□□□ 0.86
NPAS3-202ENST00000356141 ZNF396Q96N95 335 aaPredicted RBP20.43■□□□□ 0.86
NPAS3-202ENST00000356141 RTFDC1Q9BY42 306 aaPredicted RBP20.43■□□□□ 0.86
NPAS3-202ENST00000356141 FAM196BA6NMK8 535 aa20.43■□□□□ 0.86
NPAS3-202ENST00000356141 ADAMTS3O15072 1205 aa20.43■□□□□ 0.86
NPAS3-202ENST00000356141 RGL2O15211 777 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms