RNA–Protein interactions for RNA: ENST00000355556.6

HTR3A-202, Transcript of 5-hydroxytryptamine receptor 3A, humanhuman

TSL 2 BASIC

Gene HTR3A, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3A-202ENST00000355556 TPM3P06753 285 aa17.58■□□□□ 0.4
HTR3A-202ENST00000355556 HIBADHP31937 336 aaKnown RBP17.58■□□□□ 0.4
HTR3A-202ENST00000355556 RCAN1P53805 252 aa17.58■□□□□ 0.4
HTR3A-202ENST00000355556 GNL2Q13823 731 aaKnown RBP17.58■□□□□ 0.4
HTR3A-202ENST00000355556 NOLC1Q14978 699 aaKnown RBP eCLIP17.58■□□□□ 0.4
HTR3A-202ENST00000355556 ZNF654Q8IZM8 581 aa17.58■□□□□ 0.4
HTR3A-202ENST00000355556 CMTR1Q8N1G2 835 aaKnown RBP17.58■□□□□ 0.4
HTR3A-202ENST00000355556 CCDC82Q8N4S0 544 aa17.58■□□□□ 0.4
HTR3A-202ENST00000355556 CRACR2BQ8N4Y2 399 aaPredicted RBP17.58■□□□□ 0.4
HTR3A-202ENST00000355556 UBAC1Q9BSL1 405 aa17.58■□□□□ 0.4
HTR3A-202ENST00000355556 PDCL3Q9H2J4 239 aa17.58■□□□□ 0.4
HTR3A-202ENST00000355556 LY75O60449 1722 aa17.57■□□□□ 0.4
HTR3A-202ENST00000355556 PPP6R2O75170 966 aa17.57■□□□□ 0.4
HTR3A-202ENST00000355556 MECOMQ03112 1051 aa17.57■□□□□ 0.4
HTR3A-202ENST00000355556 TXNRD3Q86VQ6 643 aa17.57■□□□□ 0.4
HTR3A-202ENST00000355556 WASF1Q92558 559 aa17.57■□□□□ 0.4
HTR3A-202ENST00000355556 KIAA1468Q9P260 1216 aa17.57■□□□□ 0.4
HTR3A-202ENST00000355556 TNKSO95271 1327 aa17.57■□□□□ 0.4
HTR3A-202ENST00000355556 PDS5AQ29RF7 1337 aaKnown RBP17.57■□□□□ 0.4
HTR3A-202ENST00000355556 PFKFB1P16118 471 aa17.56■□□□□ 0.4
HTR3A-202ENST00000355556 CTR9Q6PD62 1173 aa17.56■□□□□ 0.4
HTR3A-202ENST00000355556 DHX40Q8IX18 779 aaKnown RBP17.56■□□□□ 0.4
HTR3A-202ENST00000355556 MROH7-TTC4A0A0A0MT08 1334 aa17.56■□□□□ 0.4
HTR3A-202ENST00000355556 CCDC196A0A1B0GTZ2 297 aa17.56■□□□□ 0.4
HTR3A-202ENST00000355556 MMP1P03956 469 aa17.56■□□□□ 0.4
HTR3A-202ENST00000355556 FGRP09769 529 aa17.56■□□□□ 0.4
HTR3A-202ENST00000355556 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.56■□□□□ 0.4
HTR3A-202ENST00000355556 TRIM22Q8IYM9 498 aa17.56■□□□□ 0.4
HTR3A-202ENST00000355556 NUP133Q8WUM0 1156 aa17.56■□□□□ 0.4
HTR3A-202ENST00000355556 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.56■□□□□ 0.4
HTR3A-202ENST00000355556 BTBD18B2RXH4 712 aa17.55■□□□□ 0.4
HTR3A-202ENST00000355556 GOLGA6L19H0YKK7 550 aa17.55■□□□□ 0.4
HTR3A-202ENST00000355556 ENAHQ8N8S7 591 aaPredicted RBP17.55■□□□□ 0.4
HTR3A-202ENST00000355556 KIAA1524Q8TCG1 905 aa17.55■□□□□ 0.4
HTR3A-202ENST00000355556 NRBP1Q9UHY1 535 aa17.55■□□□□ 0.4
HTR3A-202ENST00000355556 DUOX1Q9NRD9 1551 aa17.55■□□□□ 0.4
HTR3A-202ENST00000355556 IRS2Q9Y4H2 1338 aa17.55■□□□□ 0.4
HTR3A-202ENST00000355556 SBF2Q86WG5 1849 aa17.55■□□□□ 0.4
HTR3A-202ENST00000355556 PRDX5P30044 214 aa17.55■□□□□ 0.4
HTR3A-202ENST00000355556 SHC4Q6S5L8 630 aa17.55■□□□□ 0.4
HTR3A-202ENST00000355556 SARM1Q6SZW1 724 aa17.55■□□□□ 0.4
HTR3A-202ENST00000355556 NOSTRINQ8IVI9 506 aa17.55■□□□□ 0.4
HTR3A-202ENST00000355556 KCNJ14Q9UNX9 436 aa17.55■□□□□ 0.4
HTR3A-202ENST00000355556 HPSEQ9Y251 543 aa17.55■□□□□ 0.4
HTR3A-202ENST00000355556 USP17L12C9JPN9 530 aa17.54■□□□□ 0.4
HTR3A-202ENST00000355556 USP17L21D6R901 530 aa17.54■□□□□ 0.4
HTR3A-202ENST00000355556 DEXIO95424 95 aa17.54■□□□□ 0.4
HTR3A-202ENST00000355556 PTGS1P23219 599 aa17.54■□□□□ 0.4
HTR3A-202ENST00000355556 CCDC186Q7Z3E2 898 aa17.54■□□□□ 0.4
HTR3A-202ENST00000355556 ZSCAN10Q96SZ4 725 aaPredicted RBP17.54■□□□□ 0.4
HTR3A-202ENST00000355556 SPTLC3Q9NUV7 552 aa17.54■□□□□ 0.4
HTR3A-202ENST00000355556 PYCARDQ9ULZ3 195 aa17.54■□□□□ 0.4
HTR3A-202ENST00000355556 SPATA31A6Q5VVP1 1343 aa17.54■□□□□ 0.4
HTR3A-202ENST00000355556 MYH6P13533 1939 aa17.54■□□□□ 0.4
HTR3A-202ENST00000355556 PRDM1O75626 825 aa17.54■□□□□ 0.4
HTR3A-202ENST00000355556 RFC4P35249 363 aa17.54■□□□□ 0.4
HTR3A-202ENST00000355556 EVX2Q03828 476 aa17.54■□□□□ 0.4
HTR3A-202ENST00000355556 TRAPPC3LQ5T215 181 aa17.54■□□□□ 0.4
HTR3A-202ENST00000355556 DIS3L2Q8IYB7 885 aaKnown RBP17.54■□□□□ 0.4
HTR3A-202ENST00000355556 JMYQ8N9B5 988 aa17.54■□□□□ 0.4
HTR3A-202ENST00000355556 TSC1Q92574 1164 aa17.54■□□□□ 0.4
HTR3A-202ENST00000355556 AATFQ9NY61 560 aaKnown RBP eCLIP17.54■□□□□ 0.4
HTR3A-202ENST00000355556 TNRC6CQ9HCJ0 1690 aaKnown RBP17.54■□□□□ 0.4
HTR3A-202ENST00000355556 BECN2A8MW95 431 aa17.53■□□□□ 0.4
HTR3A-202ENST00000355556 SLC3A2P08195 630 aaKnown RBP17.53■□□□□ 0.4
HTR3A-202ENST00000355556 TOB1P50616 345 aaPredicted RBP17.53■□□□□ 0.4
HTR3A-202ENST00000355556 CHAF1AQ13111 956 aaPredicted RBP17.53■□□□□ 0.4
HTR3A-202ENST00000355556 PPP2R5BQ15173 497 aa17.53■□□□□ 0.4
HTR3A-202ENST00000355556 DNTTIP2Q5QJE6 756 aaKnown RBP17.53■□□□□ 0.4
HTR3A-202ENST00000355556 DRC7Q8IY82 874 aa17.53■□□□□ 0.4
HTR3A-202ENST00000355556 CEP57L1Q8IYX8 460 aa17.53■□□□□ 0.4
HTR3A-202ENST00000355556 GJD4Q96KN9 370 aaPredicted RBP17.53■□□□□ 0.4
HTR3A-202ENST00000355556 CCDC88AQ3V6T2 1871 aa17.53■□□□□ 0.4
HTR3A-202ENST00000355556 FAM237AA0A1B0GTK4 181 aa17.53■□□□□ 0.4
HTR3A-202ENST00000355556 PCP11498 1178 aaKnown RBP17.53■□□□□ 0.4
HTR3A-202ENST00000355556 SLC51AQ86UW1 340 aa17.53■□□□□ 0.4
HTR3A-202ENST00000355556 FBXW7Q969H0 707 aa17.53■□□□□ 0.4
HTR3A-202ENST00000355556 TIGD1Q96MW7 591 aa17.53■□□□□ 0.4
HTR3A-202ENST00000355556 CLIC6Q96NY7 704 aa17.53■□□□□ 0.4
HTR3A-202ENST00000355556 FOXP1Q9H334 677 aaPredicted RBP17.53■□□□□ 0.4
HTR3A-202ENST00000355556 DCP1AQ9NPI6 582 aaPredicted RBP17.53■□□□□ 0.4
HTR3A-202ENST00000355556 SYKP43405 635 aa17.52■□□□□ 0.4
HTR3A-202ENST00000355556 SAFBQ15424 915 aaKnown RBP eCLIP17.52■□□□□ 0.4
HTR3A-202ENST00000355556 DPCR1Q3MIW9 517 aa17.52■□□□□ 0.4
HTR3A-202ENST00000355556 CDC25BP30305 580 aa17.52■□□□□ 0.39
HTR3A-202ENST00000355556 RBM6P78332 1123 aaKnown RBP17.52■□□□□ 0.39
HTR3A-202ENST00000355556 NFIXQ14938 502 aa17.52■□□□□ 0.39
HTR3A-202ENST00000355556 RESP18Q5W5W9 173 aa17.52■□□□□ 0.39
HTR3A-202ENST00000355556 FAM196AQ6ZSG2 479 aa17.52■□□□□ 0.39
HTR3A-202ENST00000355556 RNF26Q9BY78 433 aaPredicted RBP17.52■□□□□ 0.39
HTR3A-202ENST00000355556 NAT10Q9H0A0 1025 aaKnown RBP17.52■□□□□ 0.39
HTR3A-202ENST00000355556 CLIP2Q9UDT6 1046 aa17.52■□□□□ 0.39
HTR3A-202ENST00000355556 JAG2Q9Y219 1238 aa17.52■□□□□ 0.39
HTR3A-202ENST00000355556 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.52■□□□□ 0.39
HTR3A-202ENST00000355556 ZBTB22O15209 634 aa17.51■□□□□ 0.39
HTR3A-202ENST00000355556 NPHP1O15259 732 aa17.51■□□□□ 0.39
HTR3A-202ENST00000355556 FUT2Q10981 343 aa17.51■□□□□ 0.39
HTR3A-202ENST00000355556 GLIPR1L2Q4G1C9 344 aa17.51■□□□□ 0.39
HTR3A-202ENST00000355556 IFIT1BQ5T764 474 aaKnown RBP17.51■□□□□ 0.39
HTR3A-202ENST00000355556 IQCA1Q86XH1 822 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms