RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 RSAD2Q8WXG1 361 aa12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 LARP6Q9BRS8 491 aaKnown RBP12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 TSHZ2Q9NRE2 1034 aa12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 GNGT2O14610 69 aa12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 CCDC93Q567U6 631 aa12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 MYSM1Q5VVJ2 828 aa12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 FAM186BQ8IYM0 893 aa12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 GPCPD1Q9NPB8 672 aa12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 AK9Q5TCS8 1911 aa12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 PARP1P09874 1014 aaKnown RBP12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 HHATQ5VTY9 493 aa12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 LMNTD2Q8IXW0 634 aa12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 CCDC171Q6TFL3 1326 aa12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 CALUO43852 315 aaPredicted RBP12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 ATF7P17544 494 aaPredicted RBP12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 ANLNQ9NQW6 1124 aa12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 F8W8V4 182 aa12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 H0YIN7 160 aa12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 ACTN4O43707 911 aaKnown RBP12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 PRPSAP1Q14558 356 aa12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 FHOD3Q2V2M9 1422 aa12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 TMEM57Q8N5G2 664 aa12.76□□□□□ -0.37
NUDCD3-202ENST00000355451 TMEM247A6NEH6 219 aa12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 ECE1P42892 770 aa12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 MAP3K7CLP57077 242 aa12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 CDC37L1Q7L3B6 337 aa12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 GDAP1Q8TB36 358 aa12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 SAP30BPQ9UHR5 308 aaKnown RBP12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 ANGPTL8Q6UXH0 198 aa12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 BBS5Q8N3I7 341 aa12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 ZBTB9Q96C00 473 aa12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 ABHD8Q96I13 439 aa12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 CCDC138Q96M89 665 aa12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 PUM3Q15397 648 aaKnown RBP12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 SCYL2Q6P3W7 929 aa12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 ARHGAP27Q6ZUM4 889 aa12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 SMAP1Q8IYB5 467 aaPredicted RBP12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 NACADO15069 1562 aa12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 RAD50Q92878 1312 aa12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 NIM1KQ8IY84 436 aa12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 CDC26Q8NHZ8 85 aa12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 DDX19AQ9NUU7 478 aaKnown RBP12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 SMARCA5O60264 1052 aaPredicted RBP12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 PPFIA4O75335 1185 aa12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 PLIN2Q99541 437 aa12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 RBSNQ9H1K0 784 aa12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 APOEP02649 317 aa12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 KANK4Q5T7N3 995 aaPredicted RBP12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 ADAMTS8Q9UP79 889 aa12.75□□□□□ -0.37
NUDCD3-202ENST00000355451 PLEKHH1Q9ULM0 1364 aa12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 YWHAEP62258 255 aaKnown RBP12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 DHX58Q96C10 678 aa12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 ZNF18P17022 549 aa12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 ELF1P32519 619 aa12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 SPAG1Q07617 926 aa12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 NME8Q8N427 588 aa12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 TEKT1Q969V4 418 aa12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 ADPGKQ9BRR6 497 aa12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 COG4Q9H9E3 785 aa12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 GTPBP10A4D1E9 387 aaKnown RBP12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 PDZD4Q76G19 769 aaPredicted RBP12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 HAUS1Q96CS2 278 aa12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 PRKCQQ04759 706 aa12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 DDB1Q16531 1140 aa12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 RSRC2Q7L4I2 434 aaKnown RBP12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 DCPSQ96C86 337 aaKnown RBP12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 MLXIPQ9HAP2 919 aa12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 ASIC3Q9UHC3 531 aa12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 RNF219Q5W0B1 726 aaPredicted RBP12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 GUCA1BQ9UMX6 200 aa12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 RTL9Q8NET4 1388 aa12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 ZNF263O14978 683 aa12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 TNNI1P19237 187 aa12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 PTPREP23469 700 aa12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 IFNA8P32881 189 aa12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 ALKBH8Q96BT7 664 aaKnown RBP12.74□□□□□ -0.37
NUDCD3-202ENST00000355451 SYNJ2BP-COX16A0A087WUM0 186 aa12.73□□□□□ -0.37
NUDCD3-202ENST00000355451 HPDP32754 393 aaPredicted RBP12.73□□□□□ -0.37
NUDCD3-202ENST00000355451 TMC2Q8TDI7 906 aa12.73□□□□□ -0.37
NUDCD3-202ENST00000355451 OPTNQ96CV9 577 aa12.73□□□□□ -0.37
NUDCD3-202ENST00000355451 EFCC1Q9HA90 598 aa12.73□□□□□ -0.37
NUDCD3-202ENST00000355451 COX16Q9P0S2 106 aa12.73□□□□□ -0.37
NUDCD3-202ENST00000355451 Q3C1V9 767 aa12.73□□□□□ -0.37
NUDCD3-202ENST00000355451 RIC8AQ9NPQ8 531 aa12.73□□□□□ -0.37
NUDCD3-202ENST00000355451 SMYD2Q9NRG4 433 aa12.73□□□□□ -0.37
NUDCD3-202ENST00000355451 PPP1R9AQ9ULJ8 1098 aa12.73□□□□□ -0.37
NUDCD3-202ENST00000355451 BNIP3LO60238 219 aa12.73□□□□□ -0.37
NUDCD3-202ENST00000355451 ELMOD1Q8N336 334 aa12.73□□□□□ -0.37
NUDCD3-202ENST00000355451 LRGUKQ96M69 825 aa12.73□□□□□ -0.37
NUDCD3-202ENST00000355451 TTC25Q96NG3 672 aa12.73□□□□□ -0.37
NUDCD3-202ENST00000355451 KLF18A0A0U1RQI7 1052 aa12.73□□□□□ -0.37
NUDCD3-202ENST00000355451 GJB2P29033 226 aa12.73□□□□□ -0.37
NUDCD3-202ENST00000355451 MAP3K21Q5TCX8 1036 aa12.73□□□□□ -0.37
NUDCD3-202ENST00000355451 RAB44Q7Z6P3 723 aaPredicted RBP12.73□□□□□ -0.37
NUDCD3-202ENST00000355451 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.73□□□□□ -0.373e-9■■■■■ 78.5
NUDCD3-202ENST00000355451 DBF4Q9UBU7 674 aaPredicted RBP12.73□□□□□ -0.37
NUDCD3-202ENST00000355451 TRAF5O00463 557 aa12.73□□□□□ -0.37
NUDCD3-202ENST00000355451 EBAG9O00559 213 aa12.73□□□□□ -0.37
NUDCD3-202ENST00000355451 CCNT1O60563 726 aaKnown RBP12.73□□□□□ -0.37
NUDCD3-202ENST00000355451 PHBP35232 272 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms