RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 MAGEB6P1A0A0J9YX57 407 aa10□□□□□ -0.81
TRIM55-204ENST00000353317 ZBTB22O15209 634 aa10□□□□□ -0.81
TRIM55-204ENST00000353317 DPEP1P16444 411 aa10□□□□□ -0.81
TRIM55-204ENST00000353317 GTF2IP78347 998 aa10□□□□□ -0.81
TRIM55-204ENST00000353317 KRT32Q14532 448 aa10□□□□□ -0.81
TRIM55-204ENST00000353317 CCDC144BQ3MJ40 725 aa10□□□□□ -0.81
TRIM55-204ENST00000353317 CYB5R4Q7L1T6 521 aa10□□□□□ -0.81
TRIM55-204ENST00000353317 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10□□□□□ -0.81
TRIM55-204ENST00000353317 CCDC144CPQ8IYA2 1237 aa10□□□□□ -0.81
TRIM55-204ENST00000353317 SENP2Q9HC62 589 aa10□□□□□ -0.81
TRIM55-204ENST00000353317 NEDD4P46934 1319 aa10□□□□□ -0.81
TRIM55-204ENST00000353317 SALL1Q9NSC2 1324 aa10□□□□□ -0.81
TRIM55-204ENST00000353317 PSDA5PKW4 1024 aaPredicted RBP10□□□□□ -0.81
TRIM55-204ENST00000353317 ZNF213O14771 459 aa10□□□□□ -0.81
TRIM55-204ENST00000353317 C21orf2O43822 256 aa10□□□□□ -0.81
TRIM55-204ENST00000353317 CEBPZQ03701 1054 aaKnown RBP10□□□□□ -0.81
TRIM55-204ENST00000353317 SCRN1Q12765 414 aa10□□□□□ -0.81
TRIM55-204ENST00000353317 ALX1Q15699 326 aa10□□□□□ -0.81
TRIM55-204ENST00000353317 DHX32Q7L7V1 743 aaKnown RBP10□□□□□ -0.81
TRIM55-204ENST00000353317 CCDC125Q86Z20 511 aa10□□□□□ -0.81
TRIM55-204ENST00000353317 MB21D2Q8IYB1 491 aaPredicted RBP10□□□□□ -0.81
TRIM55-204ENST00000353317 CACTINQ8WUQ7 758 aaKnown RBP10□□□□□ -0.81
TRIM55-204ENST00000353317 DBNDD1Q9H9R9 158 aa10□□□□□ -0.81
TRIM55-204ENST00000353317 CLIP2Q9UDT6 1046 aa10□□□□□ -0.81
TRIM55-204ENST00000353317 MAST2Q6P0Q8 1798 aa10□□□□□ -0.81
TRIM55-204ENST00000353317 SPDYE4A6NLX3 237 aa9.99□□□□□ -0.81
TRIM55-204ENST00000353317 H3BQV1 296 aa9.99□□□□□ -0.81
TRIM55-204ENST00000353317 DMTNQ08495 405 aa9.99□□□□□ -0.81
TRIM55-204ENST00000353317 IMMTQ16891 758 aaKnown RBP9.99□□□□□ -0.81
TRIM55-204ENST00000353317 IFFO2Q5TF58 517 aa9.99□□□□□ -0.81
TRIM55-204ENST00000353317 TMC4Q7Z404 712 aa9.99□□□□□ -0.81
TRIM55-204ENST00000353317 U2AF2P26368 475 aaKnown RBP eCLIP9.99□□□□□ -0.81
TRIM55-204ENST00000353317 ADD1P35611 737 aaKnown RBP9.99□□□□□ -0.81
TRIM55-204ENST00000353317 APOBRQ0VD83 1088 aa9.99□□□□□ -0.81
TRIM55-204ENST00000353317 IQCB1Q15051 598 aa9.99□□□□□ -0.81
TRIM55-204ENST00000353317 MFSD14BQ5SR56 506 aa9.99□□□□□ -0.81
TRIM55-204ENST00000353317 WDR66Q8TBY9 1149 aa9.99□□□□□ -0.81
TRIM55-204ENST00000353317 AGXT2Q9BYV1 514 aa9.99□□□□□ -0.81
TRIM55-204ENST00000353317 FTOQ9C0B1 505 aaKnown RBP eCLIP9.99□□□□□ -0.81
TRIM55-204ENST00000353317 ZSCAN16Q9H4T2 348 aaPredicted RBP9.99□□□□□ -0.81
TRIM55-204ENST00000353317 CTNNA3Q9UI47 895 aa9.99□□□□□ -0.81
TRIM55-204ENST00000353317 COL4A5P29400 1685 aa9.99□□□□□ -0.81
TRIM55-204ENST00000353317 PPFIA3O75145 1194 aa9.98□□□□□ -0.81
TRIM55-204ENST00000353317 LDHBP07195 334 aaKnown RBP9.98□□□□□ -0.81
TRIM55-204ENST00000353317 TNNT1P13805 278 aa9.98□□□□□ -0.81
TRIM55-204ENST00000353317 NCBP1Q09161 790 aaKnown RBP9.98□□□□□ -0.81
TRIM55-204ENST00000353317 SLC4A8Q2Y0W8 1093 aa9.98□□□□□ -0.81
TRIM55-204ENST00000353317 C11orf57Q6ZUT1 292 aaPredicted RBP9.98□□□□□ -0.81
TRIM55-204ENST00000353317 SMARCC2Q8TAQ2 1214 aa9.98□□□□□ -0.81
TRIM55-204ENST00000353317 SLC16A10Q8TF71 515 aa9.98□□□□□ -0.81
TRIM55-204ENST00000353317 ZC3H12CQ9C0D7 883 aaKnown RBP9.98□□□□□ -0.81
TRIM55-204ENST00000353317 NAPBQ9H115 298 aa9.98□□□□□ -0.81
TRIM55-204ENST00000353317 CFAP45Q9UL16 551 aa9.98□□□□□ -0.81
TRIM55-204ENST00000353317 PCDHAC2Q9Y5I4 1007 aa9.98□□□□□ -0.81
TRIM55-204ENST00000353317 B4E1Z4 1266 aa9.98□□□□□ -0.81
TRIM55-204ENST00000353317 CYP2D6P10635 497 aa9.98□□□□□ -0.81
TRIM55-204ENST00000353317 SH3RF3Q8TEJ3 882 aaPredicted RBP9.98□□□□□ -0.81
TRIM55-204ENST00000353317 SGIP1Q9BQI5 828 aa9.98□□□□□ -0.81
TRIM55-204ENST00000353317 BRCA1P38398 1863 aaKnown RBP9.97□□□□□ -0.81
TRIM55-204ENST00000353317 SMTNL1A8MU46 457 aa9.97□□□□□ -0.81
TRIM55-204ENST00000353317 CAVIN2O95810 425 aa9.97□□□□□ -0.81
TRIM55-204ENST00000353317 AOC3Q16853 763 aa9.97□□□□□ -0.81
TRIM55-204ENST00000353317 UTP14CQ5TAP6 766 aaKnown RBP9.97□□□□□ -0.81
TRIM55-204ENST00000353317 CTR9Q6PD62 1173 aa9.97□□□□□ -0.81
TRIM55-204ENST00000353317 DZIP1Q86YF9 867 aaKnown RBP9.97□□□□□ -0.81
TRIM55-204ENST00000353317 RAB11FIP4Q86YS3 637 aa9.97□□□□□ -0.81
TRIM55-204ENST00000353317 CNKSR1Q969H4 720 aa9.97□□□□□ -0.81
TRIM55-204ENST00000353317 RTFDC1Q9BY42 306 aaPredicted RBP9.97□□□□□ -0.81
TRIM55-204ENST00000353317 COA1Q9GZY4 146 aa9.97□□□□□ -0.81
TRIM55-204ENST00000353317 MKRN1Q9UHC7 482 aaKnown RBP9.97□□□□□ -0.81
TRIM55-204ENST00000353317 ZHX1Q9UKY1 873 aaPredicted RBP9.97□□□□□ -0.81
TRIM55-204ENST00000353317 FAM205AQ6ZU69 1335 aa9.97□□□□□ -0.81
TRIM55-204ENST00000353317 A0A087WWV3 80 aa9.97□□□□□ -0.81
TRIM55-204ENST00000353317 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.97□□□□□ -0.81
TRIM55-204ENST00000353317 F8W031 263 aaPredicted RBP9.97□□□□□ -0.81
TRIM55-204ENST00000353317 CTDNEP1O95476 244 aa9.97□□□□□ -0.81
TRIM55-204ENST00000353317 TDO2P48775 406 aa9.97□□□□□ -0.81
TRIM55-204ENST00000353317 FOSBP53539 338 aa9.97□□□□□ -0.81
TRIM55-204ENST00000353317 SNW1Q13573 536 aaKnown RBP9.97□□□□□ -0.81
TRIM55-204ENST00000353317 ARID5BQ14865 1188 aa9.97□□□□□ -0.81
TRIM55-204ENST00000353317 LRRC8AQ8IWT6 810 aa9.97□□□□□ -0.81
TRIM55-204ENST00000353317 NSUN7Q8NE18 718 aaKnown RBP9.97□□□□□ -0.81
TRIM55-204ENST00000353317 GOLPH3LQ9H4A5 285 aa9.97□□□□□ -0.81
TRIM55-204ENST00000353317 DCP1AQ9NPI6 582 aaPredicted RBP9.97□□□□□ -0.81
TRIM55-204ENST00000353317 ZSWIM5Q9P217 1185 aa9.97□□□□□ -0.81
TRIM55-204ENST00000353317 TIAM2Q8IVF5 1701 aa9.96□□□□□ -0.81
TRIM55-204ENST00000353317 YDJCA8MPS7 323 aa9.96□□□□□ -0.81
TRIM55-204ENST00000353317 MINDY4BA8MYZ0 360 aa9.96□□□□□ -0.81
TRIM55-204ENST00000353317 USP17L12C9JPN9 530 aa9.96□□□□□ -0.81
TRIM55-204ENST00000353317 USP17L21D6R901 530 aa9.96□□□□□ -0.81
TRIM55-204ENST00000353317 PRC1O43663 620 aa9.96□□□□□ -0.81
TRIM55-204ENST00000353317 PFKFB2O60825 505 aa9.96□□□□□ -0.81
TRIM55-204ENST00000353317 CDC25BP30305 580 aa9.96□□□□□ -0.81
TRIM55-204ENST00000353317 FGD1P98174 961 aa9.96□□□□□ -0.81
TRIM55-204ENST00000353317 NAA30Q147X3 362 aaPredicted RBP9.96□□□□□ -0.81
TRIM55-204ENST00000353317 SARM1Q6SZW1 724 aa9.96□□□□□ -0.81
TRIM55-204ENST00000353317 CCAR1Q8IX12 1150 aaKnown RBP9.96□□□□□ -0.81
TRIM55-204ENST00000353317 FBXW7Q969H0 707 aa9.96□□□□□ -0.81
TRIM55-204ENST00000353317 NCOA5Q9HCD5 579 aaKnown RBP9.96□□□□□ -0.81
TRIM55-204ENST00000353317 RCOR1Q9UKL0 485 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms