RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 TBX2Q13207 712 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-201ENST00000352993 TUBB2AQ13885 445 aa8.65□□□□□ -1.02
BRCA1-201ENST00000352993 CCDC70Q6NSX1 233 aa8.65□□□□□ -1.02
BRCA1-201ENST00000352993 TUBB2BQ9BVA1 445 aa8.65□□□□□ -1.02
BRCA1-201ENST00000352993 CAPS2Q9BXY5 557 aa8.65□□□□□ -1.02
BRCA1-201ENST00000352993 SERTAD1Q9UHV2 236 aa8.65□□□□□ -1.02
BRCA1-201ENST00000352993 MAN1B1Q9UKM7 699 aa8.65□□□□□ -1.02
BRCA1-201ENST00000352993 NEDD4P46934 1319 aa8.65□□□□□ -1.03
BRCA1-201ENST00000352993 PRAMEF22A3QJZ6 481 aa8.65□□□□□ -1.03
BRCA1-201ENST00000352993 SRGAP2O75044 1071 aa8.65□□□□□ -1.03
BRCA1-201ENST00000352993 ABL1P00519 1130 aa8.65□□□□□ -1.03
BRCA1-201ENST00000352993 HSPD1P10809 573 aaKnown RBP8.65□□□□□ -1.03
BRCA1-201ENST00000352993 EXOSC10Q01780 885 aaKnown RBP8.65□□□□□ -1.03
BRCA1-201ENST00000352993 POSTNQ15063 836 aa8.65□□□□□ -1.03
BRCA1-201ENST00000352993 SWT1Q5T5J6 900 aaKnown RBP8.65□□□□□ -1.03
BRCA1-201ENST00000352993 NFXL1Q6ZNB6 911 aa8.65□□□□□ -1.03
BRCA1-201ENST00000352993 POTEDQ86YR6 584 aa8.65□□□□□ -1.03
BRCA1-201ENST00000352993 MYD88Q99836 296 aa8.65□□□□□ -1.03
BRCA1-201ENST00000352993 HDAC6Q9UBN7 1215 aa8.65□□□□□ -1.03
BRCA1-201ENST00000352993 TTF2Q9UNY4 1162 aaKnown RBP8.65□□□□□ -1.03
BRCA1-201ENST00000352993 NWD2Q9ULI1 1742 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 KIF1AQ12756 1690 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 CCDC196A0A1B0GTZ2 297 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 MYO1BO43795 1136 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 SYF2O95926 243 aaKnown RBP8.64□□□□□ -1.03
BRCA1-201ENST00000352993 MCM3P25205 808 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 MATR3P43243 847 aaKnown RBP eCLIP8.64□□□□□ -1.03
BRCA1-201ENST00000352993 IRAK1P51617 712 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 ATP2B2Q01814 1243 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 ZNF530Q6P9A1 599 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-201ENST00000352993 ARHGEF25Q86VW2 580 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 PHKBQ93100 1093 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 ZNF622Q969S3 477 aaKnown RBP eCLIP8.64□□□□□ -1.035e-8■■■□□ 17.3
BRCA1-201ENST00000352993 IMMTQ16891 758 aaKnown RBP8.64□□□□□ -1.03
BRCA1-201ENST00000352993 TSR1Q2NL82 804 aaKnown RBP8.64□□□□□ -1.03
BRCA1-201ENST00000352993 SLC9C2Q5TAH2 1124 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 KRT40Q6A162 431 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 MICU3Q86XE3 530 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 CEP57Q86XR8 500 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 KBTBD3Q8NAB2 608 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 PANX2Q96RD6 677 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 TEX13AQ9BXU3 409 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-201ENST00000352993 DONSONQ9NYP3 566 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 HPCAL4Q9UM19 191 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 MYO1FO00160 1098 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 N4BP3O15049 544 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 CPP00450 1065 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 NF2P35240 595 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 SND1Q7KZF4 910 aaKnown RBP eCLIP8.64□□□□□ -1.03
BRCA1-201ENST00000352993 CCDC82Q8N4S0 544 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 MLKLQ8NB16 471 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 ANKRD24Q8TF21 1146 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 KAZALD1Q96I82 304 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 POLD4Q9HCU8 107 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 PAG1Q9NWQ8 432 aa8.64□□□□□ -1.03
BRCA1-201ENST00000352993 SBNO1A3KN83 1393 aa8.63□□□□□ -1.03
BRCA1-201ENST00000352993 METP08581 1390 aa8.63□□□□□ -1.03
BRCA1-201ENST00000352993 DLC1Q96QB1 1528 aa8.63□□□□□ -1.03
BRCA1-201ENST00000352993 BMP6P22004 513 aa8.63□□□□□ -1.03
BRCA1-201ENST00000352993 ATP1A2P50993 1020 aa8.63□□□□□ -1.03
BRCA1-201ENST00000352993 CDR1P51861 262 aa8.63□□□□□ -1.03
BRCA1-201ENST00000352993 TIMM10P62072 90 aa8.63□□□□□ -1.03
BRCA1-201ENST00000352993 MRPS25P82663 173 aaKnown RBP8.63□□□□□ -1.03
BRCA1-201ENST00000352993 PPP2R5AQ15172 486 aa8.63□□□□□ -1.03
BRCA1-201ENST00000352993 RPAINQ86UA6 219 aa8.63□□□□□ -1.03
BRCA1-201ENST00000352993 CNGA4Q8IV77 575 aa8.63□□□□□ -1.03
BRCA1-201ENST00000352993 ANKRD18AQ8IVF6 992 aa8.63□□□□□ -1.03
BRCA1-201ENST00000352993 NAA15Q9BXJ9 866 aaKnown RBP8.63□□□□□ -1.03
BRCA1-201ENST00000352993 VPS16Q9H269 839 aa8.63□□□□□ -1.03
BRCA1-201ENST00000352993 CDHR2Q9BYE9 1310 aa8.63□□□□□ -1.03
BRCA1-201ENST00000352993 SALL1Q9NSC2 1324 aa8.63□□□□□ -1.03
BRCA1-201ENST00000352993 LRP6O75581 1613 aa8.63□□□□□ -1.03
BRCA1-201ENST00000352993 PATL2C9JE40 543 aaKnown RBP8.63□□□□□ -1.03
BRCA1-201ENST00000352993 ECM2O94769 699 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-201ENST00000352993 SSBP05455 408 aaKnown RBP eCLIP8.63□□□□□ -1.03
BRCA1-201ENST00000352993 EPHA10Q5JZY3 1008 aa8.63□□□□□ -1.03
BRCA1-201ENST00000352993 UBE3BQ7Z3V4 1068 aa8.63□□□□□ -1.03
BRCA1-201ENST00000352993 KIAA1328Q86T90 577 aa8.63□□□□□ -1.03
BRCA1-201ENST00000352993 ANKLE2Q86XL3 938 aa8.63□□□□□ -1.03
BRCA1-201ENST00000352993 KRI1Q8N9T8 703 aaKnown RBP8.63□□□□□ -1.03
BRCA1-201ENST00000352993 ENOX1Q8TC92 643 aaKnown RBP8.63□□□□□ -1.03
BRCA1-201ENST00000352993 CABS1Q96KC9 395 aa8.63□□□□□ -1.03
BRCA1-201ENST00000352993 JADE2Q9NQC1 790 aa8.63□□□□□ -1.03
BRCA1-201ENST00000352993 TRIM10Q9UDY6 481 aa8.63□□□□□ -1.03
BRCA1-201ENST00000352993 KDRP35968 1356 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 CDC25AP30304 524 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 C1orf141Q5JVX7 400 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 COG1Q8WTW3 980 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 CD248Q9HCU0 757 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 BABAM1Q9NWV8 329 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 WWC3Q9ULE0 1092 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 NRAPQ86VF7 1730 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 IFIT1P09914 478 aaKnown RBP8.62□□□□□ -1.03
BRCA1-201ENST00000352993 PIP4K2AP48426 406 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-201ENST00000352993 METAP2P50579 478 aaKnown RBP eCLIP8.62□□□□□ -1.03
BRCA1-201ENST00000352993 USP14P54578 494 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 PPFIA1Q13136 1202 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 NR1I3Q14994 352 aa8.62□□□□□ -1.03
BRCA1-201ENST00000352993 SAFBQ15424 915 aaKnown RBP eCLIP8.62□□□□□ -1.03
BRCA1-201ENST00000352993 RESP18Q5W5W9 173 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms