RNA–Protein interactions for RNA: ENST00000352981.7

CASP6-202, Transcript of caspase 6, humanhuman

TSL 1 (best) BASIC

Gene CASP6, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6-202ENST00000352981 SDR42E1Q8WUS8 393 aa17.47■□□□□ 0.39
CASP6-202ENST00000352981 CSRNP1Q96S65 589 aa17.47■□□□□ 0.39
CASP6-202ENST00000352981 SERPINB13Q9UIV8 391 aa17.47■□□□□ 0.39
CASP6-202ENST00000352981 ASTN2O75129 1339 aaPredicted RBP17.46■□□□□ 0.39
CASP6-202ENST00000352981 USP17L12C9JPN9 530 aa17.46■□□□□ 0.38
CASP6-202ENST00000352981 USP17L21D6R901 530 aa17.46■□□□□ 0.38
CASP6-202ENST00000352981 PRKAB2O43741 272 aa17.46■□□□□ 0.38
CASP6-202ENST00000352981 FGRP09769 529 aa17.46■□□□□ 0.38
CASP6-202ENST00000352981 POTEIP0CG38 1075 aa17.46■□□□□ 0.38
CASP6-202ENST00000352981 POTEJP0CG39 1038 aa17.46■□□□□ 0.38
CASP6-202ENST00000352981 CACNB3P54284 484 aa17.46■□□□□ 0.38
CASP6-202ENST00000352981 GABPAQ06546 454 aa17.46■□□□□ 0.38
CASP6-202ENST00000352981 TCP10Q12799 353 aa17.46■□□□□ 0.38
CASP6-202ENST00000352981 PICALMQ13492 652 aa17.46■□□□□ 0.38
CASP6-202ENST00000352981 RNF20Q5VTR2 975 aa17.46■□□□□ 0.38
CASP6-202ENST00000352981 TMEM39BQ9GZU3 492 aa17.46■□□□□ 0.38
CASP6-202ENST00000352981 PASKQ96RG2 1323 aa17.45■□□□□ 0.38
CASP6-202ENST00000352981 FOXP2O15409 715 aa17.45■□□□□ 0.38
CASP6-202ENST00000352981 IMMTQ16891 758 aaKnown RBP17.45■□□□□ 0.38
CASP6-202ENST00000352981 TSGA10IPQ3SY00 556 aa17.45■□□□□ 0.38
CASP6-202ENST00000352981 SH3BP5LQ7L8J4 393 aa17.45■□□□□ 0.38
CASP6-202ENST00000352981 CDCA5Q96FF9 252 aa17.45■□□□□ 0.38
CASP6-202ENST00000352981 CCDC17Q96LX7 622 aa17.45■□□□□ 0.38
CASP6-202ENST00000352981 GLIS2Q9BZE0 524 aaPredicted RBP17.45■□□□□ 0.38
CASP6-202ENST00000352981 LSG1Q9H089 658 aaKnown RBP17.45■□□□□ 0.38
CASP6-202ENST00000352981 RNF41Q9H4P4 317 aaPredicted RBP17.45■□□□□ 0.38
CASP6-202ENST00000352981 ZNF112Q9UJU3 913 aa17.45■□□□□ 0.38
CASP6-202ENST00000352981 DDTLA6NHG4 134 aaPredicted RBP17.44■□□□□ 0.38
CASP6-202ENST00000352981 ZNF213O14771 459 aa17.44■□□□□ 0.38
CASP6-202ENST00000352981 PDE4BQ07343 736 aa17.44■□□□□ 0.38
CASP6-202ENST00000352981 TATDN1Q6P1N9 297 aa17.44■□□□□ 0.38
CASP6-202ENST00000352981 CCDC129Q6ZRS4 1044 aa17.44■□□□□ 0.38
CASP6-202ENST00000352981 ARMC9Q7Z3E5 817 aa17.44■□□□□ 0.38
CASP6-202ENST00000352981 ZFPM1Q8IX07 1006 aa17.44■□□□□ 0.38
CASP6-202ENST00000352981 HHIPL1Q96JK4 782 aa17.44■□□□□ 0.38
CASP6-202ENST00000352981 ZNF341Q9BYN7 854 aa17.44■□□□□ 0.38
CASP6-202ENST00000352981 EPB41L4AQ9HCS5 686 aaPredicted RBP17.44■□□□□ 0.38
CASP6-202ENST00000352981 PALD1Q9ULE6 856 aa17.44■□□□□ 0.38
CASP6-202ENST00000352981 ROBO3Q96MS0 1386 aa17.44■□□□□ 0.38
CASP6-202ENST00000352981 IREB2P48200 963 aaKnown RBP17.43■□□□□ 0.38
CASP6-202ENST00000352981 PPP4R3BQ5MIZ7 849 aa17.43■□□□□ 0.38
CASP6-202ENST00000352981 NBPF12Q5TAG4 269 aaPredicted RBP17.43■□□□□ 0.38
CASP6-202ENST00000352981 VPS53Q5VIR6 699 aa17.43■□□□□ 0.38
CASP6-202ENST00000352981 C2orf69Q8N8R5 385 aa17.43■□□□□ 0.38
CASP6-202ENST00000352981 TRIM34Q9BYJ4 488 aa17.43■□□□□ 0.38
CASP6-202ENST00000352981 TBC1D2Q9BYX2 928 aa17.43■□□□□ 0.38
CASP6-202ENST00000352981 ANO2Q9NQ90 1003 aa17.43■□□□□ 0.38
CASP6-202ENST00000352981 MYH7P12883 1935 aa17.42■□□□□ 0.38
CASP6-202ENST00000352981 ADM5C9JUS6 153 aa17.42■□□□□ 0.38
CASP6-202ENST00000352981 CTNND1O60716 968 aaKnown RBP17.42■□□□□ 0.38
CASP6-202ENST00000352981 PPARAQ07869 468 aa17.42■□□□□ 0.38
CASP6-202ENST00000352981 NECTIN1Q15223 517 aa17.42■□□□□ 0.38
CASP6-202ENST00000352981 C16orf86Q6ZW13 317 aa17.42■□□□□ 0.38
CASP6-202ENST00000352981 CRACR2BQ8N4Y2 399 aaPredicted RBP17.42■□□□□ 0.38
CASP6-202ENST00000352981 KCNB2Q92953 911 aa17.42■□□□□ 0.38
CASP6-202ENST00000352981 IL25Q9H293 177 aa17.42■□□□□ 0.38
CASP6-202ENST00000352981 CNNM2Q9H8M5 875 aa17.42■□□□□ 0.38
CASP6-202ENST00000352981 ORC4O43929 436 aa17.41■□□□□ 0.38
CASP6-202ENST00000352981 ZKSCAN1P17029 563 aaPredicted RBP17.41■□□□□ 0.38
CASP6-202ENST00000352981 PLCD1P51178 756 aa17.41■□□□□ 0.38
CASP6-202ENST00000352981 LDLRAD1Q5T700 205 aa17.41■□□□□ 0.38
CASP6-202ENST00000352981 KLRG1Q96E93 195 aa17.41■□□□□ 0.38
CASP6-202ENST00000352981 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.41■□□□□ 0.38
CASP6-202ENST00000352981 HSPA6P17066 643 aa17.4■□□□□ 0.38
CASP6-202ENST00000352981 MCCP23508 829 aa17.4■□□□□ 0.38
CASP6-202ENST00000352981 MAP3K9P80192 1104 aa17.4■□□□□ 0.38
CASP6-202ENST00000352981 PTH1RQ03431 593 aa17.4■□□□□ 0.38
CASP6-202ENST00000352981 KRT32Q14532 448 aa17.4■□□□□ 0.38
CASP6-202ENST00000352981 C8orf34Q49A92 452 aa17.4■□□□□ 0.38
CASP6-202ENST00000352981 NOL9Q5SY16 702 aaKnown RBP17.4■□□□□ 0.38
CASP6-202ENST00000352981 STAG1Q8WVM7 1258 aa17.4■□□□□ 0.38
CASP6-202ENST00000352981 MTA3Q9BTC8 594 aa17.4■□□□□ 0.38
CASP6-202ENST00000352981 USP26Q9BXU7 913 aa17.4■□□□□ 0.38
CASP6-202ENST00000352981 GBA2Q9HCG7 927 aaPredicted RBP17.4■□□□□ 0.38
CASP6-202ENST00000352981 MYO5AQ9Y4I1 1855 aaKnown RBP17.39■□□□□ 0.37
CASP6-202ENST00000352981 ECM29Q5VYK3 1845 aa17.39■□□□□ 0.37
CASP6-202ENST00000352981 PHF20L1A8MW92 1017 aa17.39■□□□□ 0.37
CASP6-202ENST00000352981 MINDY4BA8MYZ0 360 aa17.39■□□□□ 0.37
CASP6-202ENST00000352981 USP2O75604 605 aaPredicted RBP17.39■□□□□ 0.37
CASP6-202ENST00000352981 CELF2O95319 508 aaKnown RBP17.39■□□□□ 0.37
CASP6-202ENST00000352981 NUBP1P53384 320 aa17.39■□□□□ 0.37
CASP6-202ENST00000352981 ANAPC15P60006 121 aa17.39■□□□□ 0.37
CASP6-202ENST00000352981 CCDC178Q5BJE1 867 aa17.39■□□□□ 0.37
CASP6-202ENST00000352981 AKNAD1Q5T1N1 836 aa17.39■□□□□ 0.37
CASP6-202ENST00000352981 ANKRD13AQ8IZ07 590 aa17.39■□□□□ 0.37
CASP6-202ENST00000352981 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.39■□□□□ 0.37
CASP6-202ENST00000352981 IL17RAQ96F46 866 aa17.39■□□□□ 0.37
CASP6-202ENST00000352981 SAP30BPQ9UHR5 308 aaKnown RBP17.39■□□□□ 0.37
CASP6-202ENST00000352981 RBM8AQ9Y5S9 174 aaKnown RBP17.39■□□□□ 0.37
CASP6-202ENST00000352981 TMEM88BA6NKF7 163 aa17.38■□□□□ 0.37
CASP6-202ENST00000352981 ASNSP08243 561 aa17.38■□□□□ 0.37
CASP6-202ENST00000352981 HSPA4P34932 840 aa17.38■□□□□ 0.37
CASP6-202ENST00000352981 CDK8P49336 464 aa17.38■□□□□ 0.37
CASP6-202ENST00000352981 CST9Q5W186 159 aa17.38■□□□□ 0.37
CASP6-202ENST00000352981 MFSD6Q6ZSS7 791 aa17.38■□□□□ 0.37
CASP6-202ENST00000352981 ZNF444Q8N0Y2 327 aaPredicted RBP17.38■□□□□ 0.37
CASP6-202ENST00000352981 KRT23Q9C075 422 aa17.38■□□□□ 0.37
CASP6-202ENST00000352981 UPF2Q9HAU5 1272 aaKnown RBP17.38■□□□□ 0.37
CASP6-202ENST00000352981 MKNK2Q9HBH9 465 aa17.38■□□□□ 0.37
CASP6-202ENST00000352981 SYNPO2Q9UMS6 1093 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 378.7 ms