RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 CTDSPL2Q05D32 466 aa15.21■□□□□ 0.02
ERGIC3-202ENST00000348547 CHADLQ6NUI6 762 aa15.21■□□□□ 0.02
ERGIC3-202ENST00000348547 DCPSQ96C86 337 aaKnown RBP15.21■□□□□ 0.02
ERGIC3-202ENST00000348547 TMOD2Q9NZR1 351 aa15.21■□□□□ 0.02
ERGIC3-202ENST00000348547 SLC27A2O14975 620 aa15.2■□□□□ 0.02
ERGIC3-202ENST00000348547 SHMT1P34896 483 aa15.2■□□□□ 0.02
ERGIC3-202ENST00000348547 MAP3K10Q02779 954 aa15.2■□□□□ 0.02
ERGIC3-202ENST00000348547 CASC1Q6TDU7 716 aa15.2■□□□□ 0.02
ERGIC3-202ENST00000348547 MOB2Q70IA6 237 aa15.2■□□□□ 0.02
ERGIC3-202ENST00000348547 KCNB2Q92953 911 aa15.2■□□□□ 0.02
ERGIC3-202ENST00000348547 CSRNP1Q96S65 589 aa15.2■□□□□ 0.02
ERGIC3-202ENST00000348547 NAPBQ9H115 298 aa15.2■□□□□ 0.02
ERGIC3-202ENST00000348547 ANAPC4Q9UJX5 808 aa15.2■□□□□ 0.02
ERGIC3-202ENST00000348547 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.2■□□□□ 0.02
ERGIC3-202ENST00000348547 NEDD4P46934 1319 aa15.2■□□□□ 0.02
ERGIC3-202ENST00000348547 PASKQ96RG2 1323 aa15.2■□□□□ 0.02
ERGIC3-202ENST00000348547 MINDY4BA8MYZ0 360 aa15.19■□□□□ 0.02
ERGIC3-202ENST00000348547 PPARAQ07869 468 aa15.19■□□□□ 0.02
ERGIC3-202ENST00000348547 CREB3L3Q68CJ9 461 aa15.19■□□□□ 0.02
ERGIC3-202ENST00000348547 MIGA2Q7L4E1 593 aa15.19■□□□□ 0.02
ERGIC3-202ENST00000348547 SULF1Q8IWU6 871 aa15.19■□□□□ 0.02
ERGIC3-202ENST00000348547 STK11IPQ8N1F8 1099 aa15.19■□□□□ 0.02
ERGIC3-202ENST00000348547 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.19■□□□□ 0.02
ERGIC3-202ENST00000348547 U3KPZ7 1027 aaPredicted RBP15.19■□□□□ 0.02
ERGIC3-202ENST00000348547 PHF20L1A8MW92 1017 aa15.18■□□□□ 0.02
ERGIC3-202ENST00000348547 HSPA4P34932 840 aa15.18■□□□□ 0.02
ERGIC3-202ENST00000348547 TNFAIP1Q13829 316 aa15.18■□□□□ 0.02
ERGIC3-202ENST00000348547 CST9Q5W186 159 aa15.18■□□□□ 0.02
ERGIC3-202ENST00000348547 CDC37L1Q7L3B6 337 aa15.18■□□□□ 0.02
ERGIC3-202ENST00000348547 EHD4Q9H223 541 aa15.18■□□□□ 0.02
ERGIC3-202ENST00000348547 ARPP21Q9UBL0 812 aaPredicted RBP15.18■□□□□ 0.02
ERGIC3-202ENST00000348547 PPP2R3BQ9Y5P8 575 aa15.18■□□□□ 0.02
ERGIC3-202ENST00000348547 PRDM1O75626 825 aa15.17■□□□□ 0.02
ERGIC3-202ENST00000348547 FGRP09769 529 aa15.17■□□□□ 0.02
ERGIC3-202ENST00000348547 C16orf86Q6ZW13 317 aa15.17■□□□□ 0.02
ERGIC3-202ENST00000348547 ZSCAN29Q8IWY8 852 aaPredicted RBP15.17■□□□□ 0.02
ERGIC3-202ENST00000348547 KIF2CQ99661 725 aa15.17■□□□□ 0.02
ERGIC3-202ENST00000348547 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.17■□□□□ 0.02
ERGIC3-202ENST00000348547 NACAP1Q9BZK3 213 aa15.17■□□□□ 0.02
ERGIC3-202ENST00000348547 REC8O95072 547 aa15.16■□□□□ 0.02
ERGIC3-202ENST00000348547 POLR3DP05423 398 aaPredicted RBP15.16■□□□□ 0.02
ERGIC3-202ENST00000348547 RASA1P20936 1047 aa15.16■□□□□ 0.02
ERGIC3-202ENST00000348547 TNNI2P48788 182 aa15.16■□□□□ 0.02
ERGIC3-202ENST00000348547 ADCK5Q3MIX3 580 aa15.16■□□□□ 0.02
ERGIC3-202ENST00000348547 KIAA1211Q6ZU35 1233 aa15.16■□□□□ 0.02
ERGIC3-202ENST00000348547 DHX36Q9H2U1 1008 aaKnown RBP15.16■□□□□ 0.02
ERGIC3-202ENST00000348547 PI4KBQ9UBF8 816 aa15.16■□□□□ 0.02
ERGIC3-202ENST00000348547 SERPINB13Q9UIV8 391 aa15.16■□□□□ 0.02
ERGIC3-202ENST00000348547 SNX14Q9Y5W7 946 aa15.16■□□□□ 0.02
ERGIC3-202ENST00000348547 PTPRFP10586 1907 aa15.16■□□□□ 0.02
ERGIC3-202ENST00000348547 USP2O75604 605 aaPredicted RBP15.15■□□□□ 0.02
ERGIC3-202ENST00000348547 INPP5BP32019 993 aa15.15■□□□□ 0.02
ERGIC3-202ENST00000348547 CDK8P49336 464 aa15.15■□□□□ 0.02
ERGIC3-202ENST00000348547 TATDN1Q6P1N9 297 aa15.15■□□□□ 0.02
ERGIC3-202ENST00000348547 CLEC10AQ8IUN9 316 aa15.15■□□□□ 0.02
ERGIC3-202ENST00000348547 RBM46Q8TBY0 533 aaKnown RBP15.15■□□□□ 0.02
ERGIC3-202ENST00000348547 E7EWF7 191 aa15.14■□□□□ 0.01
ERGIC3-202ENST00000348547 TOMM70O94826 608 aa15.14■□□□□ 0.01
ERGIC3-202ENST00000348547 GUCY1A2P33402 732 aa15.14■□□□□ 0.01
ERGIC3-202ENST00000348547 PRKG1Q13976 671 aa15.14■□□□□ 0.01
ERGIC3-202ENST00000348547 TTC6Q86TZ1 520 aa15.14■□□□□ 0.01
ERGIC3-202ENST00000348547 STAG1Q8WVM7 1258 aa15.14■□□□□ 0.01
ERGIC3-202ENST00000348547 ZNF112Q9UJU3 913 aa15.14■□□□□ 0.01
ERGIC3-202ENST00000348547 ORC4O43929 436 aa15.13■□□□□ 0.01
ERGIC3-202ENST00000348547 TBC1D12O60347 775 aa15.13■□□□□ 0.01
ERGIC3-202ENST00000348547 CPA1P15085 419 aa15.13■□□□□ 0.01
ERGIC3-202ENST00000348547 AKR1B1P15121 316 aa15.13■□□□□ 0.01
ERGIC3-202ENST00000348547 ANTXR2P58335 489 aa15.13■□□□□ 0.01
ERGIC3-202ENST00000348547 AKNAD1Q5T1N1 836 aa15.13■□□□□ 0.01
ERGIC3-202ENST00000348547 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.13■□□□□ 0.01
ERGIC3-202ENST00000348547 CYB5R4Q7L1T6 521 aa15.13■□□□□ 0.01
ERGIC3-202ENST00000348547 CCDC84Q86UT8 332 aaPredicted RBP15.13■□□□□ 0.01
ERGIC3-202ENST00000348547 IL17RAQ96F46 866 aa15.13■□□□□ 0.01
ERGIC3-202ENST00000348547 CLMNQ96JQ2 1002 aa15.13■□□□□ 0.01
ERGIC3-202ENST00000348547 MYH4Q9Y623 1939 aa15.13■□□□□ 0.01
ERGIC3-202ENST00000348547 ZNF213O14771 459 aa15.12■□□□□ 0.01
ERGIC3-202ENST00000348547 EPB41L2O43491 1005 aaKnown RBP15.12■□□□□ 0.01
ERGIC3-202ENST00000348547 GDF11O95390 407 aa15.12■□□□□ 0.01
ERGIC3-202ENST00000348547 IMMTQ16891 758 aaKnown RBP15.12■□□□□ 0.01
ERGIC3-202ENST00000348547 TSGA10IPQ3SY00 556 aa15.12■□□□□ 0.01
ERGIC3-202ENST00000348547 FOXP4Q8IVH2 680 aaPredicted RBP15.12■□□□□ 0.01
ERGIC3-202ENST00000348547 MB21D2Q8IYB1 491 aaPredicted RBP15.12■□□□□ 0.01
ERGIC3-202ENST00000348547 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.12■□□□□ 0.012e-11■□□□□ 9.4
ERGIC3-202ENST00000348547 ZKSCAN4Q969J2 545 aaPredicted RBP15.12■□□□□ 0.01
ERGIC3-202ENST00000348547 KLRG1Q96E93 195 aa15.12■□□□□ 0.01
ERGIC3-202ENST00000348547 TBC1D32Q96NH3 1257 aa15.12■□□□□ 0.01
ERGIC3-202ENST00000348547 GPHNQ9NQX3 736 aaPredicted RBP15.12■□□□□ 0.01
ERGIC3-202ENST00000348547 CTNNA3Q9UI47 895 aa15.12■□□□□ 0.01
ERGIC3-202ENST00000348547 HERC5Q9UII4 1024 aaKnown RBP15.12■□□□□ 0.01
ERGIC3-202ENST00000348547 B4E1Z4 1266 aa15.11■□□□□ 0.01
ERGIC3-202ENST00000348547 NMT2O60551 498 aa15.11■□□□□ 0.01
ERGIC3-202ENST00000348547 CELF2O95319 508 aaKnown RBP15.11■□□□□ 0.01
ERGIC3-202ENST00000348547 HLA-DOAP06340 250 aa15.11■□□□□ 0.01
ERGIC3-202ENST00000348547 FAM47AQ5JRC9 791 aa15.11■□□□□ 0.01
ERGIC3-202ENST00000348547 LDLRAD1Q5T700 205 aa15.11■□□□□ 0.01
ERGIC3-202ENST00000348547 SIAH1Q8IUQ4 282 aa15.11■□□□□ 0.01
ERGIC3-202ENST00000348547 SMC1BQ8NDV3 1235 aa15.11■□□□□ 0.01
ERGIC3-202ENST00000348547 CNKSR2Q8WXI2 1034 aa15.11■□□□□ 0.01
ERGIC3-202ENST00000348547 DDRGK1Q96HY6 314 aa15.11■□□□□ 0.01
ERGIC3-202ENST00000348547 ZNF408Q9H9D4 720 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms