RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 F13A1P00488 732 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 RASIP1Q5U651 963 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 FRMD4BQ9Y2L6 1034 aa12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 YTHDC2Q9H6S0 1430 aaKnown RBP12.39□□□□□ -0.43
SMARCE1-202ENST00000348513 ELF1P32519 619 aa12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 BRD3Q15059 726 aa12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 FAM98CQ17RN3 349 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 GPR161Q8N6U8 529 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 SPDL1Q96EA4 605 aa12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 RBM17Q96I25 401 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 G3BP2Q9UN86 482 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 COMMD10Q9Y6G5 202 aa12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 KRT2P35908 639 aa12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 CNBD1Q8NA66 436 aa12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 SPAG5Q96R06 1193 aa12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 NUP160Q12769 1436 aa12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 TTC41PQ6P2S7 1318 aa12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 CASQ2O14958 399 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 GJC1P36383 396 aa12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 FAM160A1Q05DH4 1040 aa12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 STMN4Q9H169 189 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 ELP1O95163 1332 aa12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 TUBB2AQ13885 445 aa12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 TUBB2BQ9BVA1 445 aa12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 ANKRD2Q9GZV1 360 aa12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 UTP6Q9NYH9 597 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 GNAT2P19087 354 aa12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 STX17P56962 302 aa12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 GKAP1Q5VSY0 366 aaPredicted RBP12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 ZNF790Q6PG37 636 aa12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 SEC62Q99442 399 aaKnown RBP12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 DCTPP1Q9H773 170 aa12.38□□□□□ -0.43
SMARCE1-202ENST00000348513 RTL9Q8NET4 1388 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 PTPDC1A2A3K4 754 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 A1BGP04217 495 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 VIMP08670 466 aaKnown RBP12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 E2F5Q15329 346 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 TBC1D5Q92609 795 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 CTTNBP2Q8WZ74 1663 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 TRIM75PA6NK02 468 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 TAF5LO75529 589 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 COG7P83436 770 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 SETDB1Q15047 1291 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 PLEKHM2Q8IWE5 1019 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 GPCPD1Q9NPB8 672 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 TRPM2O94759 1503 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 KRT13P13646 458 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 NBPF14Q5TI25 921 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 ZNF354CQ86Y25 554 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 ARMT1Q9H993 441 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 NDUFB9Q9Y6M9 179 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 KIAA0556O60303 1618 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 TMEM110-MUSTN1A8MSY1 372 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 ABCD1P33897 745 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 UBAP1Q9NZ09 502 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 RTL1A6NKG5 1358 aa12.37□□□□□ -0.43
SMARCE1-202ENST00000348513 SPTLC2O15270 562 aa12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.36□□□□□ -0.432e-7■■■□□ 19.2
SMARCE1-202ENST00000348513 MORC2Q9Y6X9 1032 aaPredicted RBP12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 ABCC10Q5T3U5 1492 aa12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 OTUD7AQ8TE49 926 aaPredicted RBP12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 SOS1Q07889 1333 aaPredicted RBP12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 GNGT1P63211 74 aa12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 RAB3IL1Q8TBN0 382 aa12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 RAB3IPQ96QF0 476 aaPredicted RBP12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 RABEP2Q9H5N1 569 aa12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 TRIM35Q9UPQ4 493 aa12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 DTNBO60941 627 aa12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 ZYXQ15942 572 aaKnown RBP12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 RUFY3Q7L099 469 aa12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 PHLDB2Q86SQ0 1253 aa12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 STAG1Q8WVM7 1258 aa12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 EYA3Q99504 573 aa12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 DDX21Q9NR30 783 aaKnown RBP eCLIP12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 ZBTB40Q9NUA8 1239 aa12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 EIF2AK4Q9P2K8 1649 aaKnown RBP12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 CAND2O75155 1236 aa12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 PLCG2P16885 1265 aa12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 CHMLP26374 656 aa12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 CCT5P48643 541 aa12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 ZC4H2Q9NQZ6 224 aa12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 UNC13AQ9UPW8 1703 aa12.36□□□□□ -0.43
SMARCE1-202ENST00000348513 B4E1Z4 1266 aa12.35□□□□□ -0.43
SMARCE1-202ENST00000348513 CAPRIN2Q6IMN6 1127 aaKnown RBP12.35□□□□□ -0.43
SMARCE1-202ENST00000348513 SRLQ86TD4 932 aa12.35□□□□□ -0.43
SMARCE1-202ENST00000348513 SNUPNO95149 360 aaKnown RBP12.35□□□□□ -0.43
SMARCE1-202ENST00000348513 BMP15O95972 392 aa12.35□□□□□ -0.43
SMARCE1-202ENST00000348513 NAIF1Q69YI7 327 aaPredicted RBP12.35□□□□□ -0.43
SMARCE1-202ENST00000348513 SELENOSQ9BQE4 189 aa12.35□□□□□ -0.43
SMARCE1-202ENST00000348513 CARD6Q9BX69 1037 aa12.35□□□□□ -0.43
SMARCE1-202ENST00000348513 ZNF408Q9H9D4 720 aa12.35□□□□□ -0.43
SMARCE1-202ENST00000348513 FAM13AO94988 1023 aa12.35□□□□□ -0.43
SMARCE1-202ENST00000348513 LMOD1P29536 600 aaPredicted RBP12.35□□□□□ -0.43
SMARCE1-202ENST00000348513 CCDC155Q8N6L0 562 aa12.35□□□□□ -0.43
SMARCE1-202ENST00000348513 GMNNO75496 209 aa12.35□□□□□ -0.43
SMARCE1-202ENST00000348513 KRT79Q5XKE5 535 aa12.35□□□□□ -0.43
SMARCE1-202ENST00000348513 TTC19Q6DKK2 380 aaPredicted RBP12.35□□□□□ -0.43
SMARCE1-202ENST00000348513 CAPS2Q9BXY5 557 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms