RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 USP28Q96RU2 1077 aa24.66■■□□□ 1.54
PTPN18-202ENST00000347849 FEZ1Q99689 392 aa24.66■■□□□ 1.54
PTPN18-202ENST00000347849 SEMA3EO15041 775 aa24.66■■□□□ 1.54
PTPN18-202ENST00000347849 AATFQ9NY61 560 aaKnown RBP eCLIP24.66■■□□□ 1.54
PTPN18-202ENST00000347849 DHX16O60231 1041 aaKnown RBP24.65■■□□□ 1.54
PTPN18-202ENST00000347849 IQCB1Q15051 598 aa24.65■■□□□ 1.54
PTPN18-202ENST00000347849 C11orf57Q6ZUT1 292 aaPredicted RBP24.65■■□□□ 1.54
PTPN18-202ENST00000347849 LRRC8AQ8IWT6 810 aa24.65■■□□□ 1.54
PTPN18-202ENST00000347849 GRIK5Q16478 980 aa24.64■■□□□ 1.54
PTPN18-202ENST00000347849 SGMS1Q86VZ5 419 aa24.64■■□□□ 1.54
PTPN18-202ENST00000347849 C8orf76Q96K31 380 aa24.64■■□□□ 1.53
PTPN18-202ENST00000347849 TIAM2Q8IVF5 1701 aa24.64■■□□□ 1.53
PTPN18-202ENST00000347849 GOLGB1Q14789 3259 aaKnown RBP24.64■■□□□ 1.53
PTPN18-202ENST00000347849 ZBTB43O43298 467 aa24.63■■□□□ 1.53
PTPN18-202ENST00000347849 CAVIN2O95810 425 aa24.63■■□□□ 1.53
PTPN18-202ENST00000347849 GPSM2P81274 684 aa24.63■■□□□ 1.53
PTPN18-202ENST00000347849 SYCP1Q15431 976 aa24.63■■□□□ 1.53
PTPN18-202ENST00000347849 CRY2Q49AN0 593 aa24.63■■□□□ 1.53
PTPN18-202ENST00000347849 CEP135Q66GS9 1140 aa24.63■■□□□ 1.53
PTPN18-202ENST00000347849 FBXO18Q8NFZ0 1043 aa24.63■■□□□ 1.53
PTPN18-202ENST00000347849 KRT23Q9C075 422 aa24.63■■□□□ 1.53
PTPN18-202ENST00000347849 CNNM2Q9H8M5 875 aa24.63■■□□□ 1.53
PTPN18-202ENST00000347849 OGFRQ9NZT2 677 aa24.63■■□□□ 1.53
PTPN18-202ENST00000347849 RANBP6O60518 1105 aaKnown RBP24.63■■□□□ 1.53
PTPN18-202ENST00000347849 NTRK3Q16288 839 aa24.63■■□□□ 1.53
PTPN18-202ENST00000347849 RPGRQ92834 1020 aaKnown RBP24.63■■□□□ 1.53
PTPN18-202ENST00000347849 CDC25BP30305 580 aa24.62■■□□□ 1.53
PTPN18-202ENST00000347849 LIFRP42702 1097 aa24.62■■□□□ 1.53
PTPN18-202ENST00000347849 CCAR1Q8IX12 1150 aaKnown RBP24.62■■□□□ 1.53
PTPN18-202ENST00000347849 A0A087WWV3 80 aa24.62■■□□□ 1.53
PTPN18-202ENST00000347849 USP27XA6NNY8 438 aa24.62■■□□□ 1.53
PTPN18-202ENST00000347849 KIF28PB7ZC32 967 aa24.62■■□□□ 1.53
PTPN18-202ENST00000347849 PRDM1O75626 825 aa24.62■■□□□ 1.53
PTPN18-202ENST00000347849 POLR3DP05423 398 aaPredicted RBP24.62■■□□□ 1.53
PTPN18-202ENST00000347849 ZNF827Q17R98 1081 aa24.62■■□□□ 1.53
PTPN18-202ENST00000347849 GOLGA8AA7E2F4 631 aa24.61■■□□□ 1.53
PTPN18-202ENST00000347849 POLRMTO00411 1230 aaKnown RBP24.61■■□□□ 1.53
PTPN18-202ENST00000347849 CTR9Q6PD62 1173 aa24.61■■□□□ 1.53
PTPN18-202ENST00000347849 SLC12A7Q9Y666 1083 aa24.61■■□□□ 1.53
PTPN18-202ENST00000347849 CHD4Q14839 1912 aa24.6■■□□□ 1.53
PTPN18-202ENST00000347849 BECN2A8MW95 431 aa24.6■■□□□ 1.53
PTPN18-202ENST00000347849 KIF20AO95235 890 aa24.6■■□□□ 1.53
PTPN18-202ENST00000347849 CHMP4CQ96CF2 233 aa24.6■■□□□ 1.53
PTPN18-202ENST00000347849 PDS5AQ29RF7 1337 aaKnown RBP24.6■■□□□ 1.53
PTPN18-202ENST00000347849 USP17L12C9JPN9 530 aa24.6■■□□□ 1.53
PTPN18-202ENST00000347849 USP17L21D6R901 530 aa24.6■■□□□ 1.53
PTPN18-202ENST00000347849 SARM1Q6SZW1 724 aa24.6■■□□□ 1.53
PTPN18-202ENST00000347849 FILIP1Q7Z7B0 1213 aa24.6■■□□□ 1.53
PTPN18-202ENST00000347849 CMTR1Q8N1G2 835 aaKnown RBP24.6■■□□□ 1.53
PTPN18-202ENST00000347849 PODXL2Q9NZ53 605 aa24.6■■□□□ 1.53
PTPN18-202ENST00000347849 ANAPC4Q9UJX5 808 aa24.6■■□□□ 1.53
PTPN18-202ENST00000347849 BAZ2AQ9UIF9 1905 aaKnown RBP24.6■■□□□ 1.53
PTPN18-202ENST00000347849 XDHP47989 1333 aa24.6■■□□□ 1.53
PTPN18-202ENST00000347849 CCDC69A6NI79 296 aa24.59■■□□□ 1.53
PTPN18-202ENST00000347849 SKILP12757 684 aa24.59■■□□□ 1.53
PTPN18-202ENST00000347849 ST5P78524 1137 aa24.59■■□□□ 1.53
PTPN18-202ENST00000347849 MRFAP1L1Q96HT8 127 aa24.59■■□□□ 1.53
PTPN18-202ENST00000347849 CGNQ9P2M7 1197 aaKnown RBP24.59■■□□□ 1.53
PTPN18-202ENST00000347849 RCOR1Q9UKL0 485 aa24.59■■□□□ 1.53
PTPN18-202ENST00000347849 LEMD3Q9Y2U8 911 aa24.59■■□□□ 1.53
PTPN18-202ENST00000347849 STX1AQ16623 288 aa24.59■■□□□ 1.53
PTPN18-202ENST00000347849 SLC4A8Q2Y0W8 1093 aa24.59■■□□□ 1.53
PTPN18-202ENST00000347849 BRIP1Q9BX63 1249 aa24.59■■□□□ 1.53
PTPN18-202ENST00000347849 GOLPH3LQ9H4A5 285 aa24.59■■□□□ 1.53
PTPN18-202ENST00000347849 MYH13Q9UKX3 1938 aa24.59■■□□□ 1.53
PTPN18-202ENST00000347849 CYP2D6P10635 497 aa24.58■■□□□ 1.53
PTPN18-202ENST00000347849 ALG1Q9BT22 464 aa24.58■■□□□ 1.53
PTPN18-202ENST00000347849 WTAPQ15007 396 aa24.58■■□□□ 1.53
PTPN18-202ENST00000347849 PTPN14Q15678 1187 aa24.58■■□□□ 1.53
PTPN18-202ENST00000347849 TRMT1Q9NXH9 659 aaKnown RBP24.58■■□□□ 1.53
PTPN18-202ENST00000347849 CTAGE5O15320 804 aa24.57■■□□□ 1.52
PTPN18-202ENST00000347849 DIXDC1Q155Q3 683 aa24.57■■□□□ 1.52
PTPN18-202ENST00000347849 CCDC82Q8N4S0 544 aa24.57■■□□□ 1.52
PTPN18-202ENST00000347849 RNF41Q9H4P4 317 aaPredicted RBP24.57■■□□□ 1.52
PTPN18-202ENST00000347849 DCP1AQ9NPI6 582 aaPredicted RBP24.57■■□□□ 1.52
PTPN18-202ENST00000347849 GUCY1A2P33402 732 aa24.57■■□□□ 1.52
PTPN18-202ENST00000347849 RBM6P78332 1123 aaKnown RBP24.57■■□□□ 1.52
PTPN18-202ENST00000347849 SNW1Q13573 536 aaKnown RBP24.57■■□□□ 1.52
PTPN18-202ENST00000347849 ERCC4Q92889 916 aaPredicted RBP24.57■■□□□ 1.52
PTPN18-202ENST00000347849 FBXW7Q969H0 707 aa24.57■■□□□ 1.52
PTPN18-202ENST00000347849 UFL1O94874 794 aa24.56■■□□□ 1.52
PTPN18-202ENST00000347849 CLIC4Q9Y696 253 aa24.56■■□□□ 1.52
PTPN18-202ENST00000347849 NEMFO60524 1076 aa24.56■■□□□ 1.52
PTPN18-202ENST00000347849 KIF23Q02241 960 aaPredicted RBP24.56■■□□□ 1.52
PTPN18-202ENST00000347849 SEC23AQ15436 765 aa24.56■■□□□ 1.52
PTPN18-202ENST00000347849 CCDC73Q6ZRK6 1079 aa24.56■■□□□ 1.52
PTPN18-202ENST00000347849 DZIP1Q86YF9 867 aaKnown RBP24.56■■□□□ 1.52
PTPN18-202ENST00000347849 TNKSO95271 1327 aa24.55■■□□□ 1.52
PTPN18-202ENST00000347849 DHX40Q8IX18 779 aaKnown RBP24.55■■□□□ 1.52
PTPN18-202ENST00000347849 SLC26A6Q9BXS9 759 aa24.55■■□□□ 1.52
PTPN18-202ENST00000347849 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.55■■□□□ 1.52
PTPN18-202ENST00000347849 DDX41Q9UJV9 622 aaKnown RBP24.55■■□□□ 1.52
PTPN18-202ENST00000347849 V9GYY5 206 aaPredicted RBP24.55■■□□□ 1.52
PTPN18-202ENST00000347849 KINO60870 393 aaKnown RBP24.55■■□□□ 1.52
PTPN18-202ENST00000347849 IARSP41252 1262 aaKnown RBP24.55■■□□□ 1.52
PTPN18-202ENST00000347849 COL23A1Q86Y22 540 aaPredicted RBP24.55■■□□□ 1.52
PTPN18-202ENST00000347849 KRT40Q6A162 431 aa24.54■■□□□ 1.52
PTPN18-202ENST00000347849 NUP133Q8WUM0 1156 aa24.54■■□□□ 1.52
PTPN18-202ENST00000347849 ESR2Q92731 530 aa24.54■■□□□ 1.52
PTPN18-202ENST00000347849 RBM17Q96I25 401 aaKnown RBP24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms