RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 RRAGDQ9NQL2 400 aaPredicted RBP19.91■□□□□ 0.78
SMARCC2-202ENST00000347471 V9GY48 417 aaPredicted RBP19.91■□□□□ 0.78
SMARCC2-202ENST00000347471 TFAP4Q01664 338 aa19.91■□□□□ 0.78
SMARCC2-202ENST00000347471 DBNDD1Q9H9R9 158 aa19.91■□□□□ 0.78
SMARCC2-202ENST00000347471 VPS54Q9P1Q0 977 aa19.91■□□□□ 0.78
SMARCC2-202ENST00000347471 DPP8Q6V1X1 898 aaPredicted RBP19.91■□□□□ 0.78
SMARCC2-202ENST00000347471 KLHL34Q8N239 644 aa19.91■□□□□ 0.78
SMARCC2-202ENST00000347471 PPP1R1BQ9UD71 204 aaPredicted RBP19.91■□□□□ 0.78
SMARCC2-202ENST00000347471 ILDR1Q86SU0 546 aaPredicted RBP19.9■□□□□ 0.78
SMARCC2-202ENST00000347471 BIN1O00499 593 aa19.9■□□□□ 0.78
SMARCC2-202ENST00000347471 ATP2B4P23634 1241 aa19.9■□□□□ 0.78
SMARCC2-202ENST00000347471 ATP2B2Q01814 1243 aa19.9■□□□□ 0.78
SMARCC2-202ENST00000347471 SPC24Q8NBT2 197 aa19.9■□□□□ 0.78
SMARCC2-202ENST00000347471 BBOX1O75936 387 aa19.9■□□□□ 0.78
SMARCC2-202ENST00000347471 PLEKHA8P1O95397 391 aa19.9■□□□□ 0.78
SMARCC2-202ENST00000347471 ZNF444Q8N0Y2 327 aaPredicted RBP19.9■□□□□ 0.78
SMARCC2-202ENST00000347471 CHRNA5P30532 468 aa19.89■□□□□ 0.78
SMARCC2-202ENST00000347471 LIFRP42702 1097 aa19.89■□□□□ 0.78
SMARCC2-202ENST00000347471 KIF23Q02241 960 aaPredicted RBP19.89■□□□□ 0.78
SMARCC2-202ENST00000347471 NR5A1Q13285 461 aa19.89■□□□□ 0.78
SMARCC2-202ENST00000347471 SALL1Q9NSC2 1324 aa19.89■□□□□ 0.78
SMARCC2-202ENST00000347471 CTCFLQ8NI51 663 aaPredicted RBP19.89■□□□□ 0.77
SMARCC2-202ENST00000347471 PCDHA7Q9UN72 937 aa19.89■□□□□ 0.77
SMARCC2-202ENST00000347471 USP17L3A6NCW0 530 aa19.89■□□□□ 0.77
SMARCC2-202ENST00000347471 USP17L4A6NCW7 530 aa19.89■□□□□ 0.77
SMARCC2-202ENST00000347471 SPTLC2O15270 562 aa19.89■□□□□ 0.77
SMARCC2-202ENST00000347471 EIF6P56537 245 aaKnown RBP19.89■□□□□ 0.77
SMARCC2-202ENST00000347471 USP17L1Q7RTZ2 530 aa19.89■□□□□ 0.77
SMARCC2-202ENST00000347471 LUZP1Q86V48 1076 aa19.89■□□□□ 0.77
SMARCC2-202ENST00000347471 DIS3L2Q8IYB7 885 aaKnown RBP19.89■□□□□ 0.77
SMARCC2-202ENST00000347471 DNAJC25Q9H1X3 360 aa19.89■□□□□ 0.77
SMARCC2-202ENST00000347471 FAM217BQ9NTX9 383 aaPredicted RBP19.89■□□□□ 0.77
SMARCC2-202ENST00000347471 LETM1O95202 739 aaPredicted RBP19.88■□□□□ 0.77
SMARCC2-202ENST00000347471 TSPY3P0CV98 308 aa19.88■□□□□ 0.77
SMARCC2-202ENST00000347471 TSPY8P0CW00 308 aa19.88■□□□□ 0.77
SMARCC2-202ENST00000347471 ANO6Q4KMQ2 910 aa19.88■□□□□ 0.77
SMARCC2-202ENST00000347471 TDRD7Q8NHU6 1098 aaKnown RBP19.88■□□□□ 0.77
SMARCC2-202ENST00000347471 CCDC196A0A1B0GTZ2 297 aa19.88■□□□□ 0.77
SMARCC2-202ENST00000347471 EVCP57679 992 aa19.88■□□□□ 0.77
SMARCC2-202ENST00000347471 TYRO3Q06418 890 aa19.88■□□□□ 0.77
SMARCC2-202ENST00000347471 LDHCP07864 332 aa19.88■□□□□ 0.77
SMARCC2-202ENST00000347471 MSNP26038 577 aaKnown RBP19.88■□□□□ 0.77
SMARCC2-202ENST00000347471 BRIP1Q9BX63 1249 aa19.88■□□□□ 0.77
SMARCC2-202ENST00000347471 GOLPH3LQ9H4A5 285 aa19.88■□□□□ 0.77
SMARCC2-202ENST00000347471 EZH2Q15910 746 aaKnown RBP19.87■□□□□ 0.77
SMARCC2-202ENST00000347471 SGMS1Q86VZ5 419 aa19.87■□□□□ 0.77
SMARCC2-202ENST00000347471 DRC7Q8IY82 874 aa19.87■□□□□ 0.77
SMARCC2-202ENST00000347471 DDX60Q8IY21 1712 aaKnown RBP19.87■□□□□ 0.77
SMARCC2-202ENST00000347471 TMTC2Q8N394 836 aa19.87■□□□□ 0.77
SMARCC2-202ENST00000347471 ZNF830Q96NB3 372 aaPredicted RBP19.87■□□□□ 0.77
SMARCC2-202ENST00000347471 DDX19AQ9NUU7 478 aaKnown RBP19.87■□□□□ 0.77
SMARCC2-202ENST00000347471 CLIC6Q96NY7 704 aa19.87■□□□□ 0.77
SMARCC2-202ENST00000347471 PLCD1P51178 756 aa19.86■□□□□ 0.77
SMARCC2-202ENST00000347471 GSTO1P78417 241 aa19.86■□□□□ 0.77
SMARCC2-202ENST00000347471 ANO1Q5XXA6 986 aa19.86■□□□□ 0.77
SMARCC2-202ENST00000347471 C2CD5Q86YS7 1000 aa19.86■□□□□ 0.77
SMARCC2-202ENST00000347471 CPVLQ9H3G5 476 aa19.86■□□□□ 0.77
SMARCC2-202ENST00000347471 VAT1LQ9HCJ6 419 aa19.86■□□□□ 0.77
SMARCC2-202ENST00000347471 ESPNB1AK53 854 aa19.86■□□□□ 0.77
SMARCC2-202ENST00000347471 KAT14Q9H8E8 782 aa19.86■□□□□ 0.77
SMARCC2-202ENST00000347471 ATP8A2Q9NTI2 1148 aa19.86■□□□□ 0.77
SMARCC2-202ENST00000347471 TTF2Q9UNY4 1162 aaKnown RBP19.86■□□□□ 0.77
SMARCC2-202ENST00000347471 ELP1O95163 1332 aa19.86■□□□□ 0.77
SMARCC2-202ENST00000347471 KIAA0825Q8IV33 1275 aa19.86■□□□□ 0.77
SMARCC2-202ENST00000347471 CABP5Q9NP86 173 aa19.86■□□□□ 0.77
SMARCC2-202ENST00000347471 GOLGA8HP0CJ92 632 aa19.85■□□□□ 0.77
SMARCC2-202ENST00000347471 PDILTQ8N807 584 aa19.85■□□□□ 0.77
SMARCC2-202ENST00000347471 CACNB3P54284 484 aa19.85■□□□□ 0.77
SMARCC2-202ENST00000347471 NTRK3Q16288 839 aa19.85■□□□□ 0.77
SMARCC2-202ENST00000347471 OXER1Q8TDS5 423 aa19.85■□□□□ 0.77
SMARCC2-202ENST00000347471 RCOR1Q9UKL0 485 aa19.85■□□□□ 0.77
SMARCC2-202ENST00000347471 HOMER1Q86YM7 354 aa19.85■□□□□ 0.77
SMARCC2-202ENST00000347471 MRPS27Q92552 414 aaKnown RBP19.85■□□□□ 0.77
SMARCC2-202ENST00000347471 ARPP21Q9UBL0 812 aaPredicted RBP19.85■□□□□ 0.77
SMARCC2-202ENST00000347471 ADCY5O95622 1261 aa19.84■□□□□ 0.77
SMARCC2-202ENST00000347471 KCNQ5Q9NR82 932 aa19.84■□□□□ 0.77
SMARCC2-202ENST00000347471 ZSCAN29Q8IWY8 852 aaPredicted RBP19.84■□□□□ 0.77
SMARCC2-202ENST00000347471 PDGFDQ9GZP0 370 aaPredicted RBP19.84■□□□□ 0.77
SMARCC2-202ENST00000347471 WDR19Q8NEZ3 1342 aa19.84■□□□□ 0.77
SMARCC2-202ENST00000347471 C4BP0C0L5 1744 aa19.84■□□□□ 0.77
SMARCC2-202ENST00000347471 SLURP2P0DP57 97 aa19.84■□□□□ 0.77
SMARCC2-202ENST00000347471 NDUFA8P51970 172 aa19.84■□□□□ 0.77
SMARCC2-202ENST00000347471 TCP10Q12799 353 aa19.84■□□□□ 0.77
SMARCC2-202ENST00000347471 CRY2Q49AN0 593 aa19.84■□□□□ 0.77
SMARCC2-202ENST00000347471 RASGRP2Q7LDG7 609 aa19.84■□□□□ 0.77
SMARCC2-202ENST00000347471 DEFB132Q7Z7B7 95 aa19.84■□□□□ 0.77
SMARCC2-202ENST00000347471 CRACR2BQ8N4Y2 399 aaPredicted RBP19.84■□□□□ 0.77
SMARCC2-202ENST00000347471 LINC00301Q8NCQ3 95 aa19.84■□□□□ 0.77
SMARCC2-202ENST00000347471 WASF1Q92558 559 aa19.84■□□□□ 0.77
SMARCC2-202ENST00000347471 IFNAR1P17181 557 aa19.83■□□□□ 0.77
SMARCC2-202ENST00000347471 BRAPQ7Z569 592 aa19.83■□□□□ 0.77
SMARCC2-202ENST00000347471 CLSTN2Q9H4D0 955 aa19.83■□□□□ 0.77
SMARCC2-202ENST00000347471 BECN2A8MW95 431 aa19.83■□□□□ 0.76
SMARCC2-202ENST00000347471 FMNL1O95466 1100 aaPredicted RBP19.83■□□□□ 0.76
SMARCC2-202ENST00000347471 MRVI1Q9Y6F6 885 aa19.83■□□□□ 0.76
SMARCC2-202ENST00000347471 FAM205CA6NFA0 338 aa19.82■□□□□ 0.76
SMARCC2-202ENST00000347471 FBXL16Q8N461 479 aa19.82■□□□□ 0.76
SMARCC2-202ENST00000347471 ANO8Q9HCE9 1232 aaPredicted RBP19.82■□□□□ 0.76
SMARCC2-202ENST00000347471 MPHOSPH10O00566 681 aaKnown RBP19.82■□□□□ 0.76
SMARCC2-202ENST00000347471 RGL2O15211 777 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms