RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 MAP3K5Q99683 1374 aa8.77□□□□□ -1.01
KPNA1-201ENST00000344337 GOLGA6BA6NDN3 693 aa8.77□□□□□ -1.01
KPNA1-201ENST00000344337 TRAF5O00463 557 aa8.77□□□□□ -1.01
KPNA1-201ENST00000344337 ERCC5P28715 1186 aaPredicted RBP8.77□□□□□ -1.01
KPNA1-201ENST00000344337 TERF2Q15554 542 aa8.77□□□□□ -1.01
KPNA1-201ENST00000344337 TRIM68Q6AZZ1 485 aa8.77□□□□□ -1.01
KPNA1-201ENST00000344337 CALML4Q96GE6 196 aa8.77□□□□□ -1.01
KPNA1-201ENST00000344337 ANGEL1Q9UNK9 670 aaKnown RBP8.77□□□□□ -1.01
KPNA1-201ENST00000344337 CCDC160A6NGH7 325 aa8.77□□□□□ -1.01
KPNA1-201ENST00000344337 KRT86O43790 486 aa8.77□□□□□ -1.01
KPNA1-201ENST00000344337 SASH1O94885 1247 aa8.77□□□□□ -1.01
KPNA1-201ENST00000344337 KRT2P35908 639 aa8.77□□□□□ -1.01
KPNA1-201ENST00000344337 ZYXQ15942 572 aaKnown RBP8.77□□□□□ -1.01
KPNA1-201ENST00000344337 AMOTQ4VCS5 1084 aa8.77□□□□□ -1.01
KPNA1-201ENST00000344337 EPHA10Q5JZY3 1008 aa8.77□□□□□ -1.01
KPNA1-201ENST00000344337 CFAP58Q5T655 872 aa8.77□□□□□ -1.01
KPNA1-201ENST00000344337 ANKRD18AQ8IVF6 992 aa8.77□□□□□ -1.01
KPNA1-201ENST00000344337 CSGALNACT2Q8N6G5 542 aa8.77□□□□□ -1.01
KPNA1-201ENST00000344337 NELFBQ8WX92 580 aa8.77□□□□□ -1.01
KPNA1-201ENST00000344337 EPSTI1Q96J88 318 aa8.77□□□□□ -1.01
KPNA1-201ENST00000344337 ABCB4P21439 1286 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 IFNAR2P48551 515 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 GCKRQ14397 625 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 LONRF2Q1L5Z9 754 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 SPECC1LQ69YQ0 1117 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 RRAGAQ7L523 313 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 TEX11Q8IYF3 940 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 DPH5Q9H2P9 285 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 DDX41Q9UJV9 622 aaKnown RBP8.76□□□□□ -1.01
KPNA1-201ENST00000344337 NIP7Q9Y221 180 aaKnown RBP eCLIP8.76□□□□□ -1.01
KPNA1-201ENST00000344337 CCDC121Q6ZUS5 278 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 PI4K2BQ8TCG2 481 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 RRP15Q9Y3B9 282 aaKnown RBP8.76□□□□□ -1.01
KPNA1-201ENST00000344337 CEP83Q9Y592 693 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 GON4LQ3T8J9 2241 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 YTHDC2Q9H6S0 1430 aaKnown RBP8.76□□□□□ -1.01
KPNA1-201ENST00000344337 PSMA7O14818 248 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 CUL4AQ13619 759 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 NAA16Q6N069 864 aaPredicted RBP8.76□□□□□ -1.01
KPNA1-201ENST00000344337 KBTBD3Q8NAB2 608 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 SSH3Q8TE77 659 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 FAM212AQ96EL1 285 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 TSG101Q99816 390 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 HMGXB3Q12766 1538 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 A0A1W2PRG0 241 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 TACC1O75410 805 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 COL9A3Q14050 684 aaPredicted RBP8.76□□□□□ -1.01
KPNA1-201ENST00000344337 UAP1Q16222 522 aaPredicted RBP8.76□□□□□ -1.01
KPNA1-201ENST00000344337 AKAP4Q5JQC9 854 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 DTHD1Q6ZMT9 781 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 ANKLE2Q86XL3 938 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 SIRT1Q96EB6 747 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 DNAJC17Q9NVM6 304 aaKnown RBP8.76□□□□□ -1.01
KPNA1-201ENST00000344337 TRIM10Q9UDY6 481 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 IBTKQ9P2D0 1353 aaPredicted RBP8.76□□□□□ -1.01
KPNA1-201ENST00000344337 NEBLO76041 1014 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 FGFR1OPO95684 399 aaKnown RBP8.76□□□□□ -1.01
KPNA1-201ENST00000344337 GABPB1Q06547 395 aaPredicted RBP8.76□□□□□ -1.01
KPNA1-201ENST00000344337 KANSL2Q9H9L4 492 aa8.76□□□□□ -1.01
KPNA1-201ENST00000344337 GOLGA4Q13439 2230 aaKnown RBP8.75□□□□□ -1.01
KPNA1-201ENST00000344337 IVLP07476 585 aa8.75□□□□□ -1.01
KPNA1-201ENST00000344337 EAPPQ56P03 285 aaPredicted RBP8.75□□□□□ -1.01
KPNA1-201ENST00000344337 MSL1Q68DK7 614 aa8.75□□□□□ -1.01
KPNA1-201ENST00000344337 MYO6Q9UM54 1294 aa8.75□□□□□ -1.01
KPNA1-201ENST00000344337 NEURL1BA8MQ27 555 aa8.75□□□□□ -1.01
KPNA1-201ENST00000344337 N4BP1O75113 896 aaKnown RBP8.75□□□□□ -1.01
KPNA1-201ENST00000344337 LRRC41Q15345 812 aa8.75□□□□□ -1.01
KPNA1-201ENST00000344337 KCNH5Q8NCM2 988 aa8.75□□□□□ -1.01
KPNA1-201ENST00000344337 NSUN7Q8NE18 718 aaKnown RBP8.75□□□□□ -1.01
KPNA1-201ENST00000344337 SLC39A2Q9NP94 309 aa8.75□□□□□ -1.01
KPNA1-201ENST00000344337 DENND2AQ9ULE3 1009 aa8.75□□□□□ -1.01
KPNA1-201ENST00000344337 MAGEB6P1A0A0J9YX57 407 aa8.75□□□□□ -1.01
KPNA1-201ENST00000344337 DDX39AO00148 427 aaKnown RBP8.75□□□□□ -1.01
KPNA1-201ENST00000344337 CEP104O60308 925 aa8.75□□□□□ -1.01
KPNA1-201ENST00000344337 PUS7Q96PZ0 661 aaKnown RBP8.75□□□□□ -1.01
KPNA1-201ENST00000344337 PUS7LQ9H0K6 701 aaKnown RBP8.75□□□□□ -1.01
KPNA1-201ENST00000344337 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.75□□□□□ -1.01
KPNA1-201ENST00000344337 KDM5AP29375 1690 aaKnown RBP8.75□□□□□ -1.01
KPNA1-201ENST00000344337 IL15P40933 162 aaPredicted RBP8.75□□□□□ -1.01
KPNA1-201ENST00000344337 BCAMP50895 628 aa8.75□□□□□ -1.01
KPNA1-201ENST00000344337 C8orf74Q6P047 294 aa8.75□□□□□ -1.01
KPNA1-201ENST00000344337 ANKRD42Q8N9B4 389 aa8.75□□□□□ -1.01
KPNA1-201ENST00000344337 JPH2Q9BR39 696 aaPredicted RBP8.75□□□□□ -1.01
KPNA1-201ENST00000344337 CSRNP2Q9H175 543 aa8.75□□□□□ -1.01
KPNA1-201ENST00000344337 ABCB6Q9NP58 842 aa8.75□□□□□ -1.01
KPNA1-201ENST00000344337 SMARCAL1Q9NZC9 954 aa8.75□□□□□ -1.01
KPNA1-201ENST00000344337 GCC2Q8IWJ2 1684 aa8.75□□□□□ -1.01
KPNA1-201ENST00000344337 NSD2O96028 1365 aa8.75□□□□□ -1.01
KPNA1-201ENST00000344337 TOB2Q14106 344 aaPredicted RBP8.75□□□□□ -1.01
KPNA1-201ENST00000344337 WDR24Q96S15 920 aa8.75□□□□□ -1.01
KPNA1-201ENST00000344337 GOLGA6L9A6NEM1 432 aa8.74□□□□□ -1.01
KPNA1-201ENST00000344337 CLTAP09496 248 aa8.74□□□□□ -1.01
KPNA1-201ENST00000344337 SESN3P58005 492 aa8.74□□□□□ -1.01
KPNA1-201ENST00000344337 IFT88Q13099 833 aa8.74□□□□□ -1.01
KPNA1-201ENST00000344337 ADALQ6DHV7 355 aa8.74□□□□□ -1.01
KPNA1-201ENST00000344337 ESR2Q92731 530 aa8.74□□□□□ -1.01
KPNA1-201ENST00000344337 DDX21Q9NR30 783 aaKnown RBP eCLIP8.74□□□□□ -1.01
KPNA1-201ENST00000344337 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.74□□□□□ -1.01
KPNA1-201ENST00000344337 GGT7Q9UJ14 662 aa8.74□□□□□ -1.01
KPNA1-201ENST00000344337 BCS1LQ9Y276 419 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms