RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 MED14O60244 1454 aa17.63■□□□□ 0.41
CARMIL3-201ENST00000342740 PDIA3P30101 505 aaKnown RBP17.63■□□□□ 0.41
CARMIL3-201ENST00000342740 PRPF4BQ13523 1007 aaKnown RBP17.63■□□□□ 0.41
CARMIL3-201ENST00000342740 QTRT2Q9H974 415 aaKnown RBP17.63■□□□□ 0.41
CARMIL3-201ENST00000342740 USP40Q9NVE5 1235 aa17.63■□□□□ 0.41
CARMIL3-201ENST00000342740 LRRIQ1Q96JM4 1722 aa17.63■□□□□ 0.41
CARMIL3-201ENST00000342740 NCAPD2Q15021 1401 aa17.63■□□□□ 0.41
CARMIL3-201ENST00000342740 TULP4Q9NRJ4 1543 aa17.63■□□□□ 0.41
CARMIL3-201ENST00000342740 CDC42BPGQ6DT37 1551 aa17.63■□□□□ 0.41
CARMIL3-201ENST00000342740 PDE6BP35913 854 aa17.63■□□□□ 0.41
CARMIL3-201ENST00000342740 PAXIP1Q6ZW49 1069 aaPredicted RBP17.63■□□□□ 0.41
CARMIL3-201ENST00000342740 ZSCAN10Q96SZ4 725 aaPredicted RBP17.63■□□□□ 0.41
CARMIL3-201ENST00000342740 DYNC1I1O14576 645 aa17.63■□□□□ 0.41
CARMIL3-201ENST00000342740 USP37Q86T82 979 aa17.63■□□□□ 0.41
CARMIL3-201ENST00000342740 PI4K2BQ8TCG2 481 aa17.63■□□□□ 0.41
CARMIL3-201ENST00000342740 NAA15Q9BXJ9 866 aaKnown RBP17.63■□□□□ 0.41
CARMIL3-201ENST00000342740 SETD1BQ9UPS6 1966 aaKnown RBP17.63■□□□□ 0.41
CARMIL3-201ENST00000342740 MSL1Q68DK7 614 aa17.62■□□□□ 0.41
CARMIL3-201ENST00000342740 KRT25Q7Z3Z0 450 aa17.62■□□□□ 0.41
CARMIL3-201ENST00000342740 CHAMP1Q96JM3 812 aa17.62■□□□□ 0.41
CARMIL3-201ENST00000342740 CCDC42Q96M95 316 aa17.62■□□□□ 0.41
CARMIL3-201ENST00000342740 EPHA10Q5JZY3 1008 aa17.62■□□□□ 0.41
CARMIL3-201ENST00000342740 TEKT1Q969V4 418 aa17.62■□□□□ 0.41
CARMIL3-201ENST00000342740 MAPK8IP1Q9UQF2 711 aa17.62■□□□□ 0.41
CARMIL3-201ENST00000342740 LUC7L2Q9Y383 392 aaKnown RBP17.62■□□□□ 0.41
CARMIL3-201ENST00000342740 NF2P35240 595 aa17.62■□□□□ 0.41
CARMIL3-201ENST00000342740 ZYXQ15942 572 aaKnown RBP17.62■□□□□ 0.41
CARMIL3-201ENST00000342740 SUPT20HQ8NEM7 779 aa17.62■□□□□ 0.41
CARMIL3-201ENST00000342740 GLT8D2Q9H1C3 349 aa17.62■□□□□ 0.41
CARMIL3-201ENST00000342740 ARID5AQ03989 594 aa17.62■□□□□ 0.41
CARMIL3-201ENST00000342740 FLAD1Q8NFF5 587 aa17.62■□□□□ 0.41
CARMIL3-201ENST00000342740 TBC1D5Q92609 795 aa17.62■□□□□ 0.41
CARMIL3-201ENST00000342740 ADALQ6DHV7 355 aa17.61■□□□□ 0.41
CARMIL3-201ENST00000342740 DNAI2Q9GZS0 605 aa17.61■□□□□ 0.41
CARMIL3-201ENST00000342740 PUF60Q9UHX1 559 aaKnown RBP17.61■□□□□ 0.41
CARMIL3-201ENST00000342740 ZBTB21Q9ULJ3 1066 aa17.61■□□□□ 0.41
CARMIL3-201ENST00000342740 QRICH2Q9H0J4 1663 aa17.61■□□□□ 0.41
CARMIL3-201ENST00000342740 POTEB2H3BUK9 544 aa17.61■□□□□ 0.41
CARMIL3-201ENST00000342740 CCT6AP40227 531 aaKnown RBP17.61■□□□□ 0.41
CARMIL3-201ENST00000342740 CBX1P83916 185 aa17.61■□□□□ 0.41
CARMIL3-201ENST00000342740 PDE4DQ08499 809 aa17.61■□□□□ 0.41
CARMIL3-201ENST00000342740 HLTFQ14527 1009 aaKnown RBP eCLIP17.61■□□□□ 0.41
CARMIL3-201ENST00000342740 NLGN1Q8N2Q7 840 aa17.61■□□□□ 0.41
CARMIL3-201ENST00000342740 MLKLQ8NB16 471 aa17.61■□□□□ 0.41
CARMIL3-201ENST00000342740 TTLL11Q8NHH1 800 aa17.61■□□□□ 0.41
CARMIL3-201ENST00000342740 CTNNBL1Q8WYA6 563 aaPredicted RBP17.61■□□□□ 0.41
CARMIL3-201ENST00000342740 FERMT2Q96AC1 680 aa17.61■□□□□ 0.41
CARMIL3-201ENST00000342740 CLEC11AQ9Y240 323 aa17.61■□□□□ 0.41
CARMIL3-201ENST00000342740 ARHGEF40Q8TER5 1519 aa17.61■□□□□ 0.41
CARMIL3-201ENST00000342740 SCRN1Q12765 414 aa17.61■□□□□ 0.41
CARMIL3-201ENST00000342740 ERFEQ4G0M1 354 aa17.61■□□□□ 0.41
CARMIL3-201ENST00000342740 CCDC65Q8IXS2 484 aa17.61■□□□□ 0.41
CARMIL3-201ENST00000342740 PPRC1Q5VV67 1664 aaKnown RBP17.61■□□□□ 0.41
CARMIL3-201ENST00000342740 MTX1Q13505 466 aa17.6■□□□□ 0.41
CARMIL3-201ENST00000342740 TCHPQ9BT92 498 aa17.6■□□□□ 0.41
CARMIL3-201ENST00000342740 PPIP5K2O43314 1243 aa17.6■□□□□ 0.41
CARMIL3-201ENST00000342740 ADCY7P51828 1080 aa17.6■□□□□ 0.41
CARMIL3-201ENST00000342740 NOSTRINQ8IVI9 506 aa17.6■□□□□ 0.41
CARMIL3-201ENST00000342740 DRC1Q96MC2 740 aa17.6■□□□□ 0.41
CARMIL3-201ENST00000342740 IFI16Q16666 785 aaKnown RBP17.6■□□□□ 0.41
CARMIL3-201ENST00000342740 PNMA1Q8ND90 353 aa17.6■□□□□ 0.41
CARMIL3-201ENST00000342740 OSBP2Q969R2 916 aa17.6■□□□□ 0.41
CARMIL3-201ENST00000342740 LRWD1Q9UFC0 647 aa17.6■□□□□ 0.41
CARMIL3-201ENST00000342740 ZMYM6O95789 1325 aa17.6■□□□□ 0.41
CARMIL3-201ENST00000342740 KRT83P78385 493 aa17.6■□□□□ 0.41
CARMIL3-201ENST00000342740 KIF5AQ12840 1032 aa17.6■□□□□ 0.41
CARMIL3-201ENST00000342740 TRAF5O00463 557 aa17.59■□□□□ 0.41
CARMIL3-201ENST00000342740 FBXO18Q8NFZ0 1043 aa17.59■□□□□ 0.41
CARMIL3-201ENST00000342740 NEK11Q8NG66 645 aa17.59■□□□□ 0.41
CARMIL3-201ENST00000342740 TUBB4AP04350 444 aa17.59■□□□□ 0.41
CARMIL3-201ENST00000342740 DLGAP5Q15398 846 aa17.59■□□□□ 0.41
CARMIL3-201ENST00000342740 REXO1Q8N1G1 1221 aaKnown RBP17.59■□□□□ 0.41
CARMIL3-201ENST00000342740 RNF216Q9NWF9 866 aaPredicted RBP17.59■□□□□ 0.41
CARMIL3-201ENST00000342740 PKD2L1Q9P0L9 805 aa17.59■□□□□ 0.41
CARMIL3-201ENST00000342740 DIP2CQ9Y2E4 1556 aa17.59■□□□□ 0.41
CARMIL3-201ENST00000342740 ADD2P35612 726 aa17.59■□□□□ 0.41
CARMIL3-201ENST00000342740 HLFQ16534 295 aa17.59■□□□□ 0.41
CARMIL3-201ENST00000342740 BTBD18B2RXH4 712 aa17.59■□□□□ 0.41
CARMIL3-201ENST00000342740 B4DLN1 442 aa17.59■□□□□ 0.41
CARMIL3-201ENST00000342740 PPP1R2P41236 205 aa17.59■□□□□ 0.41
CARMIL3-201ENST00000342740 SP4Q02446 784 aa17.59■□□□□ 0.41
CARMIL3-201ENST00000342740 CUL4AQ13619 759 aa17.59■□□□□ 0.41
CARMIL3-201ENST00000342740 DOK7Q18PE1 504 aa17.59■□□□□ 0.41
CARMIL3-201ENST00000342740 CNGA4Q8IV77 575 aa17.59■□□□□ 0.41
CARMIL3-201ENST00000342740 STAMQ92783 540 aa17.59■□□□□ 0.41
CARMIL3-201ENST00000342740 VPS16Q9H269 839 aa17.59■□□□□ 0.41
CARMIL3-201ENST00000342740 LZTFL1Q9NQ48 299 aa17.59■□□□□ 0.41
CARMIL3-201ENST00000342740 CTNND2Q9UQB3 1225 aa17.59■□□□□ 0.41
CARMIL3-201ENST00000342740 KRT86O43790 486 aa17.58■□□□□ 0.41
CARMIL3-201ENST00000342740 NLRP12P59046 1061 aa17.58■□□□□ 0.41
CARMIL3-201ENST00000342740 FANCCQ00597 558 aa17.58■□□□□ 0.41
CARMIL3-201ENST00000342740 POSTNQ15063 836 aa17.58■□□□□ 0.41
CARMIL3-201ENST00000342740 SUSD4Q5VX71 490 aa17.58■□□□□ 0.41
CARMIL3-201ENST00000342740 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.58■□□□□ 0.41
CARMIL3-201ENST00000342740 KIAA0825Q8IV33 1275 aa17.58■□□□□ 0.41
CARMIL3-201ENST00000342740 LRRC7Q96NW7 1537 aa17.58■□□□□ 0.4
CARMIL3-201ENST00000342740 M0R2C6 588 aa17.58■□□□□ 0.4
CARMIL3-201ENST00000342740 ATP8A2Q9NTI2 1148 aa17.58■□□□□ 0.4
CARMIL3-201ENST00000342740 NFE2L3Q9Y4A8 694 aa17.58■□□□□ 0.4
CARMIL3-201ENST00000342740 MED23Q9ULK4 1368 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms