RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 PPARAQ07869 468 aa13.55□□□□□ -0.24
CDH5-201ENST00000341529 POSTNQ15063 836 aa13.55□□□□□ -0.24
CDH5-201ENST00000341529 ERCC6LQ2NKX8 1250 aa13.55□□□□□ -0.24
CDH5-201ENST00000341529 DNAJC21Q5F1R6 531 aaKnown RBP13.55□□□□□ -0.24
CDH5-201ENST00000341529 SMARCC1Q92922 1105 aaPredicted RBP13.55□□□□□ -0.24
CDH5-201ENST00000341529 PGBD1Q96JS3 809 aa13.55□□□□□ -0.24
CDH5-201ENST00000341529 TTC14Q96N46 770 aa13.55□□□□□ -0.24
CDH5-201ENST00000341529 BCCIPQ9P287 314 aaKnown RBP eCLIP13.55□□□□□ -0.24
CDH5-201ENST00000341529 PTPRMP28827 1452 aa13.55□□□□□ -0.24
CDH5-201ENST00000341529 NBPF26B4DH59 902 aa13.55□□□□□ -0.24
CDH5-201ENST00000341529 NLRP12P59046 1061 aa13.55□□□□□ -0.24
CDH5-201ENST00000341529 CHRNDQ07001 517 aa13.55□□□□□ -0.24
CDH5-201ENST00000341529 PLS1Q14651 629 aa13.55□□□□□ -0.24
CDH5-201ENST00000341529 NBPF14Q5TI25 921 aa13.55□□□□□ -0.24
CDH5-201ENST00000341529 NBPF10Q6P3W6 841 aaKnown RBP13.55□□□□□ -0.24
CDH5-201ENST00000341529 DYMQ7RTS9 669 aa13.55□□□□□ -0.24
CDH5-201ENST00000341529 NBPF15Q8N660 670 aa13.55□□□□□ -0.24
CDH5-201ENST00000341529 CWC15Q9P013 229 aaKnown RBP13.55□□□□□ -0.24
CDH5-201ENST00000341529 CCDC94Q9BW85 323 aaPredicted RBP13.55□□□□□ -0.24
CDH5-201ENST00000341529 PIH1D3Q9NQM4 214 aaKnown RBP13.55□□□□□ -0.24
CDH5-201ENST00000341529 PKD2L1Q9P0L9 805 aa13.55□□□□□ -0.24
CDH5-201ENST00000341529 TBC1D7Q9P0N9 293 aa13.55□□□□□ -0.24
CDH5-201ENST00000341529 USO1O60763 962 aaKnown RBP13.54□□□□□ -0.24
CDH5-201ENST00000341529 CALM1P0DP23 149 aa13.54□□□□□ -0.24
CDH5-201ENST00000341529 CALM2P0DP24 149 aa13.54□□□□□ -0.24
CDH5-201ENST00000341529 CALM3P0DP25 149 aa13.54□□□□□ -0.24
CDH5-201ENST00000341529 RPS8P62241 208 aaKnown RBP13.54□□□□□ -0.24
CDH5-201ENST00000341529 TCP10Q12799 353 aa13.54□□□□□ -0.24
CDH5-201ENST00000341529 FANCBQ8NB91 859 aa13.54□□□□□ -0.24
CDH5-201ENST00000341529 CCDC113Q9H0I3 377 aa13.54□□□□□ -0.24
CDH5-201ENST00000341529 MAP3K15Q6ZN16 1313 aa13.54□□□□□ -0.24
CDH5-201ENST00000341529 ATP1A3P13637 1013 aa13.54□□□□□ -0.24
CDH5-201ENST00000341529 PAFAH1B1P43034 410 aa13.54□□□□□ -0.24
CDH5-201ENST00000341529 CRB1P82279 1406 aa13.54□□□□□ -0.24
CDH5-201ENST00000341529 CUTAO60888 179 aa13.54□□□□□ -0.24
CDH5-201ENST00000341529 AMPD3Q01432 767 aa13.54□□□□□ -0.24
CDH5-201ENST00000341529 NAA30Q147X3 362 aaPredicted RBP13.54□□□□□ -0.24
CDH5-201ENST00000341529 NLRP10Q86W26 655 aa13.54□□□□□ -0.24
CDH5-201ENST00000341529 NOSTRINQ8IVI9 506 aa13.54□□□□□ -0.24
CDH5-201ENST00000341529 SPAG5Q96R06 1193 aa13.54□□□□□ -0.24
CDH5-201ENST00000341529 DENND2AQ9ULE3 1009 aa13.54□□□□□ -0.24
CDH5-201ENST00000341529 CARMIL3Q8ND23 1372 aa13.54□□□□□ -0.24
CDH5-201ENST00000341529 MCAMP43121 646 aa13.54□□□□□ -0.24
CDH5-201ENST00000341529 CNBD1Q8NA66 436 aa13.54□□□□□ -0.24
CDH5-201ENST00000341529 RABEP2Q9H5N1 569 aa13.54□□□□□ -0.24
CDH5-201ENST00000341529 ATP10DQ9P241 1426 aa13.53□□□□□ -0.24
CDH5-201ENST00000341529 LOC102724428A0A0B4J2F2 783 aa13.53□□□□□ -0.24
CDH5-201ENST00000341529 SIK1P57059 783 aa13.53□□□□□ -0.24
CDH5-201ENST00000341529 ATL3Q6DD88 541 aa13.53□□□□□ -0.24
CDH5-201ENST00000341529 LCORLQ8N3X6 602 aa13.53□□□□□ -0.24
CDH5-201ENST00000341529 ZSWIM5Q9P217 1185 aa13.53□□□□□ -0.24
CDH5-201ENST00000341529 RTL9Q8NET4 1388 aa13.53□□□□□ -0.24
CDH5-201ENST00000341529 ADGRL3Q9HAR2 1447 aa13.53□□□□□ -0.24
CDH5-201ENST00000341529 CTAGE15A4D2H0 777 aa13.53□□□□□ -0.24
CDH5-201ENST00000341529 GOLGA6L10A6NI86 522 aa13.53□□□□□ -0.24
CDH5-201ENST00000341529 AKR1B15C9JRZ8 316 aaPredicted RBP13.53□□□□□ -0.24
CDH5-201ENST00000341529 HLA-DOAP06340 250 aa13.53□□□□□ -0.24
CDH5-201ENST00000341529 CTAGE8P0CG41 777 aa13.53□□□□□ -0.24
CDH5-201ENST00000341529 CASP1P29466 404 aa13.53□□□□□ -0.24
CDH5-201ENST00000341529 RESTQ13127 1097 aa13.53□□□□□ -0.24
CDH5-201ENST00000341529 ZYXQ15942 572 aaKnown RBP13.53□□□□□ -0.24
CDH5-201ENST00000341529 CTAGE6Q86UF2 777 aa13.53□□□□□ -0.24
CDH5-201ENST00000341529 CTAGE4Q8IX94 777 aa13.53□□□□□ -0.24
CDH5-201ENST00000341529 GPR101Q96P66 508 aaPredicted RBP13.53□□□□□ -0.24
CDH5-201ENST00000341529 SLF1Q9BQI6 1058 aa13.53□□□□□ -0.24
CDH5-201ENST00000341529 LUC7L2Q9Y383 392 aaKnown RBP13.53□□□□□ -0.24
CDH5-201ENST00000341529 CALML3P27482 149 aa13.53□□□□□ -0.24
CDH5-201ENST00000341529 KRT9P35527 623 aa13.53□□□□□ -0.24
CDH5-201ENST00000341529 CRKLP46109 303 aaKnown RBP13.53□□□□□ -0.24
CDH5-201ENST00000341529 PARP10Q53GL7 1025 aa13.53□□□□□ -0.24
CDH5-201ENST00000341529 RBM26Q5T8P6 1007 aaKnown RBP13.53□□□□□ -0.24
CDH5-201ENST00000341529 WDR78Q5VTH9 848 aa13.53□□□□□ -0.24
CDH5-201ENST00000341529 STOX1Q6ZVD7 989 aa13.53□□□□□ -0.24
CDH5-201ENST00000341529 CLTCQ00610 1675 aaKnown RBP13.52□□□□□ -0.24
CDH5-201ENST00000341529 TBC1D8BQ0IIM8 1120 aa13.52□□□□□ -0.24
CDH5-201ENST00000341529 FCHSD1Q86WN1 690 aa13.52□□□□□ -0.24
CDH5-201ENST00000341529 LRRC8AQ8IWT6 810 aa13.52□□□□□ -0.24
CDH5-201ENST00000341529 CCDC42Q96M95 316 aa13.52□□□□□ -0.24
CDH5-201ENST00000341529 CCNT1O60563 726 aaKnown RBP13.52□□□□□ -0.25
CDH5-201ENST00000341529 ECM2O94769 699 aaPredicted RBP13.52□□□□□ -0.25
CDH5-201ENST00000341529 BMP15O95972 392 aa13.52□□□□□ -0.25
CDH5-201ENST00000341529 ST5P78524 1137 aa13.52□□□□□ -0.25
CDH5-201ENST00000341529 PDE4DQ08499 809 aa13.52□□□□□ -0.25
CDH5-201ENST00000341529 ZNF804AQ7Z570 1209 aa13.52□□□□□ -0.25
CDH5-201ENST00000341529 TTLL11Q8NHH1 800 aa13.52□□□□□ -0.25
CDH5-201ENST00000341529 C6orf50Q9HD87 102 aa13.52□□□□□ -0.25
CDH5-201ENST00000341529 MED14O60244 1454 aa13.52□□□□□ -0.25
CDH5-201ENST00000341529 KCNQ2O43526 872 aa13.52□□□□□ -0.25
CDH5-201ENST00000341529 GNAQP50148 359 aa13.52□□□□□ -0.25
CDH5-201ENST00000341529 RASGRF1Q13972 1273 aa13.52□□□□□ -0.25
CDH5-201ENST00000341529 RMND1Q9NWS8 449 aa13.52□□□□□ -0.25
CDH5-201ENST00000341529 WDR17Q8IZU2 1322 aa13.52□□□□□ -0.25
CDH5-201ENST00000341529 GOLGA6L9A6NEM1 432 aa13.51□□□□□ -0.25
CDH5-201ENST00000341529 TRAPPC3LQ5T215 181 aa13.51□□□□□ -0.25
CDH5-201ENST00000341529 USPL1Q5W0Q7 1092 aa13.51□□□□□ -0.25
CDH5-201ENST00000341529 SLF2Q8IX21 1173 aa13.51□□□□□ -0.25
CDH5-201ENST00000341529 RRP36Q96EU6 259 aaKnown RBP13.51□□□□□ -0.25
CDH5-201ENST00000341529 PRM3Q9NNZ6 103 aa13.51□□□□□ -0.25
CDH5-201ENST00000341529 ZBTB21Q9ULJ3 1066 aa13.51□□□□□ -0.25
CDH5-201ENST00000341529 CTAGE9A4FU28 777 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms