RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 IRF5Q13568 498 aa17.05■□□□□ 0.32
UPK3BL1-201ENST00000340457 MVPQ14764 893 aaKnown RBP17.05■□□□□ 0.32
UPK3BL1-201ENST00000340457 TRMT2AQ8IZ69 625 aaKnown RBP17.05■□□□□ 0.32
UPK3BL1-201ENST00000340457 DIS3LQ8TF46 1054 aaKnown RBP17.05■□□□□ 0.32
UPK3BL1-201ENST00000340457 PAWRQ96IZ0 340 aaKnown RBP17.05■□□□□ 0.32
UPK3BL1-201ENST00000340457 HDAC5Q9UQL6 1122 aa17.05■□□□□ 0.32
UPK3BL1-201ENST00000340457 AKAP2Q9Y2D5 859 aa17.05■□□□□ 0.32
UPK3BL1-201ENST00000340457 GORABQ5T7V8 394 aa17.04■□□□□ 0.32
UPK3BL1-201ENST00000340457 PAK6Q9NQU5 681 aaPredicted RBP17.04■□□□□ 0.32
UPK3BL1-201ENST00000340457 RAI14Q9P0K7 980 aa17.04■□□□□ 0.32
UPK3BL1-201ENST00000340457 STAP2Q9UGK3 403 aa17.04■□□□□ 0.32
UPK3BL1-201ENST00000340457 ZBTB22O15209 634 aa17.03■□□□□ 0.32
UPK3BL1-201ENST00000340457 TBC1D12O60347 775 aa17.03■□□□□ 0.32
UPK3BL1-201ENST00000340457 TRIM32Q13049 653 aa17.03■□□□□ 0.32
UPK3BL1-201ENST00000340457 FAM110CQ1W6H9 321 aa17.03■□□□□ 0.32
UPK3BL1-201ENST00000340457 SPATA5Q8NB90 893 aa17.03■□□□□ 0.32
UPK3BL1-201ENST00000340457 NSUN4Q96CB9 384 aaKnown RBP17.03■□□□□ 0.32
UPK3BL1-201ENST00000340457 PNMA3Q9UL41 463 aa17.03■□□□□ 0.32
UPK3BL1-201ENST00000340457 ALPK3Q96L96 1907 aa17.02■□□□□ 0.32
UPK3BL1-201ENST00000340457 SOX1O00570 391 aaPredicted RBP17.02■□□□□ 0.32
UPK3BL1-201ENST00000340457 PEX10O60683 326 aa17.02■□□□□ 0.32
UPK3BL1-201ENST00000340457 TEX11Q8IYF3 940 aa17.02■□□□□ 0.32
UPK3BL1-201ENST00000340457 PROCA1Q8NCQ7 364 aaPredicted RBP17.02■□□□□ 0.32
UPK3BL1-201ENST00000340457 ZNF280CQ8ND82 737 aa17.02■□□□□ 0.32
UPK3BL1-201ENST00000340457 CRISPLD2Q9H0B8 497 aa17.02■□□□□ 0.32
UPK3BL1-201ENST00000340457 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.02■□□□□ 0.32
UPK3BL1-201ENST00000340457 OSBPL5Q9H0X9 879 aaPredicted RBP17.02■□□□□ 0.32
UPK3BL1-201ENST00000340457 ASCC2Q9H1I8 757 aaPredicted RBP17.02■□□□□ 0.32
UPK3BL1-201ENST00000340457 TNNQ9UQP3 1299 aa17.02■□□□□ 0.32
UPK3BL1-201ENST00000340457 ATAD5Q96QE3 1844 aa17.02■□□□□ 0.32
UPK3BL1-201ENST00000340457 LDHCP07864 332 aa17.01■□□□□ 0.31
UPK3BL1-201ENST00000340457 GNAI3P08754 354 aa17.01■□□□□ 0.31
UPK3BL1-201ENST00000340457 CAP2P40123 477 aa17.01■□□□□ 0.31
UPK3BL1-201ENST00000340457 RARSP54136 660 aaKnown RBP17.01■□□□□ 0.31
UPK3BL1-201ENST00000340457 GSTO1P78417 241 aa17.01■□□□□ 0.31
UPK3BL1-201ENST00000340457 SH3RF3Q8TEJ3 882 aaPredicted RBP17.01■□□□□ 0.31
UPK3BL1-201ENST00000340457 LRCH3Q96II8 777 aa17.01■□□□□ 0.31
UPK3BL1-201ENST00000340457 NPM3O75607 178 aaKnown RBP17■□□□□ 0.31
UPK3BL1-201ENST00000340457 MCAMP43121 646 aa17■□□□□ 0.31
UPK3BL1-201ENST00000340457 SHROOM1Q2M3G4 852 aaPredicted RBP17■□□□□ 0.31
UPK3BL1-201ENST00000340457 SNRKQ9NRH2 765 aa17■□□□□ 0.31
UPK3BL1-201ENST00000340457 LRP2BPQ9P2M1 347 aa17■□□□□ 0.31
UPK3BL1-201ENST00000340457 ZMYND8Q9ULU4 1186 aaPredicted RBP17■□□□□ 0.31
UPK3BL1-201ENST00000340457 LOC285556D6RIA3 1793 aa17■□□□□ 0.31
UPK3BL1-201ENST00000340457 USP17L5A8MUK1 530 aa16.99■□□□□ 0.31
UPK3BL1-201ENST00000340457 HMGCRP04035 888 aa16.99■□□□□ 0.31
UPK3BL1-201ENST00000340457 CT47B1P0C2W7 299 aaPredicted RBP16.99■□□□□ 0.31
UPK3BL1-201ENST00000340457 GCLCP48506 637 aaPredicted RBP16.99■□□□□ 0.31
UPK3BL1-201ENST00000340457 JAG1P78504 1218 aa16.99■□□□□ 0.31
UPK3BL1-201ENST00000340457 MTX1Q13505 466 aa16.99■□□□□ 0.31
UPK3BL1-201ENST00000340457 NECAB2Q7Z6G3 386 aa16.99■□□□□ 0.31
UPK3BL1-201ENST00000340457 C7orf61Q8IZ16 206 aa16.99■□□□□ 0.31
UPK3BL1-201ENST00000340457 GJD2Q9UKL4 321 aa16.99■□□□□ 0.31
UPK3BL1-201ENST00000340457 PNMA6EA0A0J9YXQ4 647 aa16.98■□□□□ 0.31
UPK3BL1-201ENST00000340457 ARID4AP29374 1257 aaPredicted RBP16.98■□□□□ 0.31
UPK3BL1-201ENST00000340457 MTMR2Q13614 643 aa16.98■□□□□ 0.31
UPK3BL1-201ENST00000340457 AATFQ9NY61 560 aaKnown RBP eCLIP16.98■□□□□ 0.31
UPK3BL1-201ENST00000340457 CYP2B6P20813 491 aa16.97■□□□□ 0.31
UPK3BL1-201ENST00000340457 G3BP1Q13283 466 aaKnown RBP eCLIP16.97■□□□□ 0.31
UPK3BL1-201ENST00000340457 PABPC4Q13310 644 aaKnown RBP eCLIP16.97■□□□□ 0.312e-6■■■■■ 41.4
UPK3BL1-201ENST00000340457 MAPKAPK5Q8IW41 473 aa16.97■□□□□ 0.31
UPK3BL1-201ENST00000340457 P2RX7Q99572 595 aaKnown RBP16.97■□□□□ 0.31
UPK3BL1-201ENST00000340457 CUL9Q8IWT3 2517 aa16.97■□□□□ 0.31
UPK3BL1-201ENST00000340457 COL2A1P02458 1487 aaPredicted RBP16.97■□□□□ 0.31
UPK3BL1-201ENST00000340457 GDF11O95390 407 aa16.96■□□□□ 0.31
UPK3BL1-201ENST00000340457 SYN1P17600 705 aa16.96■□□□□ 0.31
UPK3BL1-201ENST00000340457 IRX3P78415 501 aaPredicted RBP16.96■□□□□ 0.31
UPK3BL1-201ENST00000340457 SH3D19Q5HYK7 790 aa16.96■□□□□ 0.31
UPK3BL1-201ENST00000340457 TGFBRAP1Q8WUH2 860 aa16.96■□□□□ 0.31
UPK3BL1-201ENST00000340457 TRIB2Q92519 343 aa16.96■□□□□ 0.31
UPK3BL1-201ENST00000340457 CLUAP1Q96AJ1 413 aa16.96■□□□□ 0.31
UPK3BL1-201ENST00000340457 NOL10Q9BSC4 688 aaKnown RBP16.96■□□□□ 0.31
UPK3BL1-201ENST00000340457 AS3MTQ9HBK9 375 aa16.96■□□□□ 0.31
UPK3BL1-201ENST00000340457 TXNRD2Q9NNW7 524 aa16.96■□□□□ 0.31
UPK3BL1-201ENST00000340457 HMX1Q9NP08 348 aaPredicted RBP16.96■□□□□ 0.31
UPK3BL1-201ENST00000340457 PI4KBQ9UBF8 816 aa16.96■□□□□ 0.31
UPK3BL1-201ENST00000340457 HERC5Q9UII4 1024 aaKnown RBP16.96■□□□□ 0.31
UPK3BL1-201ENST00000340457 RPTORQ8N122 1335 aa16.96■□□□□ 0.31
UPK3BL1-201ENST00000340457 PLXNB2O15031 1838 aa16.96■□□□□ 0.31
UPK3BL1-201ENST00000340457 SIPA1L1O43166 1804 aa16.96■□□□□ 0.31
UPK3BL1-201ENST00000340457 MAP4K4O95819 1239 aaPredicted RBP16.96■□□□□ 0.3
UPK3BL1-201ENST00000340457 GNAI2P04899 355 aa16.96■□□□□ 0.3
UPK3BL1-201ENST00000340457 MNX1P50219 401 aaPredicted RBP16.96■□□□□ 0.3
UPK3BL1-201ENST00000340457 NAA16Q6N069 864 aaPredicted RBP16.96■□□□□ 0.3
UPK3BL1-201ENST00000340457 ADGRA1Q86SQ6 560 aa16.96■□□□□ 0.3
UPK3BL1-201ENST00000340457 SLC17A8Q8NDX2 589 aa16.96■□□□□ 0.3
UPK3BL1-201ENST00000340457 ARHGAP45Q92619 1136 aa16.96■□□□□ 0.3
UPK3BL1-201ENST00000340457 FRAT1Q92837 279 aaPredicted RBP16.96■□□□□ 0.3
UPK3BL1-201ENST00000340457 TBC1D2Q9BYX2 928 aa16.96■□□□□ 0.3
UPK3BL1-201ENST00000340457 DNAJC18Q9H819 358 aa16.96■□□□□ 0.3
UPK3BL1-201ENST00000340457 SAP30BPQ9UHR5 308 aaKnown RBP16.96■□□□□ 0.3
UPK3BL1-201ENST00000340457 DNAH12Q6ZR08 3092 aa16.95■□□□□ 0.3
UPK3BL1-201ENST00000340457 A0A1W2PPC1 479 aa16.95■□□□□ 0.3
UPK3BL1-201ENST00000340457 UQCRFS1P1P0C7P4 283 aa16.95■□□□□ 0.3
UPK3BL1-201ENST00000340457 TRIM27P14373 513 aa16.95■□□□□ 0.3
UPK3BL1-201ENST00000340457 BACE1P56817 501 aa16.95■□□□□ 0.3
UPK3BL1-201ENST00000340457 DBNDD2Q9BQY9 259 aa16.95■□□□□ 0.3
UPK3BL1-201ENST00000340457 WDR18Q9BV38 432 aa16.95■□□□□ 0.3
UPK3BL1-201ENST00000340457 NBPF3Q9H094 633 aa16.95■□□□□ 0.3
UPK3BL1-201ENST00000340457 TMOD4Q9NZQ9 345 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms