RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 NOB1Q9ULX3 412 aaKnown RBP14.23□□□□□ -0.13
CSMD2-202ENST00000338325 AKAP2Q9Y2D5 859 aa14.23□□□□□ -0.13
CSMD2-202ENST00000338325 SIPA1L1O43166 1804 aa14.23□□□□□ -0.13
CSMD2-202ENST00000338325 CDK5RAP2Q96SN8 1893 aa14.22□□□□□ -0.13
CSMD2-202ENST00000338325 FAM196BA6NMK8 535 aa14.22□□□□□ -0.13
CSMD2-202ENST00000338325 MAP4K4O95819 1239 aaPredicted RBP14.22□□□□□ -0.13
CSMD2-202ENST00000338325 GCLCP48506 637 aaPredicted RBP14.22□□□□□ -0.13
CSMD2-202ENST00000338325 ZNF384Q8TF68 577 aa14.22□□□□□ -0.13
CSMD2-202ENST00000338325 CDCA7LQ96GN5 454 aa14.22□□□□□ -0.13
CSMD2-202ENST00000338325 PAWRQ96IZ0 340 aaKnown RBP14.22□□□□□ -0.13
CSMD2-202ENST00000338325 MEIS3Q99687 375 aa14.22□□□□□ -0.13
CSMD2-202ENST00000338325 TBC1D2Q9BYX2 928 aa14.22□□□□□ -0.13
CSMD2-202ENST00000338325 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.22□□□□□ -0.13
CSMD2-202ENST00000338325 FOCADQ5VW36 1801 aa14.22□□□□□ -0.13
CSMD2-202ENST00000338325 HMGCRP04035 888 aa14.21□□□□□ -0.13
CSMD2-202ENST00000338325 CT47B1P0C2W7 299 aaPredicted RBP14.21□□□□□ -0.13
CSMD2-202ENST00000338325 GSTO1P78417 241 aa14.21□□□□□ -0.13
CSMD2-202ENST00000338325 TFCP2Q12800 502 aa14.21□□□□□ -0.13
CSMD2-202ENST00000338325 PABPC4Q13310 644 aaKnown RBP eCLIP14.21□□□□□ -0.13
CSMD2-202ENST00000338325 NECAB2Q7Z6G3 386 aa14.21□□□□□ -0.13
CSMD2-202ENST00000338325 ZNF280CQ8ND82 737 aa14.21□□□□□ -0.13
CSMD2-202ENST00000338325 LDHCP07864 332 aa14.2□□□□□ -0.14
CSMD2-202ENST00000338325 SPP2Q13103 211 aa14.2□□□□□ -0.14
CSMD2-202ENST00000338325 ANKLE1Q8NAG6 615 aa14.2□□□□□ -0.14
CSMD2-202ENST00000338325 SOX1O00570 391 aaPredicted RBP14.2□□□□□ -0.14
CSMD2-202ENST00000338325 SRGAP3O43295 1099 aa14.2□□□□□ -0.14
CSMD2-202ENST00000338325 HMGCS2P54868 508 aa14.2□□□□□ -0.14
CSMD2-202ENST00000338325 TRMT2AQ8IZ69 625 aaKnown RBP14.2□□□□□ -0.14
CSMD2-202ENST00000338325 DIS3LQ8TF46 1054 aaKnown RBP14.2□□□□□ -0.14
CSMD2-202ENST00000338325 NSUN4Q96CB9 384 aaKnown RBP14.2□□□□□ -0.14
CSMD2-202ENST00000338325 ASCC2Q9H1I8 757 aaPredicted RBP14.2□□□□□ -0.14
CSMD2-202ENST00000338325 HMG20BQ9P0W2 317 aa14.2□□□□□ -0.14
CSMD2-202ENST00000338325 STAP2Q9UGK3 403 aa14.2□□□□□ -0.14
CSMD2-202ENST00000338325 USP17L5A8MUK1 530 aa14.19□□□□□ -0.14
CSMD2-202ENST00000338325 CAP2P40123 477 aa14.19□□□□□ -0.14
CSMD2-202ENST00000338325 MTX1Q13505 466 aa14.19□□□□□ -0.14
CSMD2-202ENST00000338325 SH3D19Q5HYK7 790 aa14.19□□□□□ -0.14
CSMD2-202ENST00000338325 PI16Q6UXB8 463 aa14.19□□□□□ -0.14
CSMD2-202ENST00000338325 SPATA5Q8NB90 893 aa14.19□□□□□ -0.14
CSMD2-202ENST00000338325 NEUROD6Q96NK8 337 aa14.19□□□□□ -0.14
CSMD2-202ENST00000338325 AS3MTQ9HBK9 375 aa14.19□□□□□ -0.14
CSMD2-202ENST00000338325 RPTORQ8N122 1335 aa14.18□□□□□ -0.14
CSMD2-202ENST00000338325 GNAI3P08754 354 aa14.18□□□□□ -0.14
CSMD2-202ENST00000338325 ARID4AP29374 1257 aaPredicted RBP14.18□□□□□ -0.14
CSMD2-202ENST00000338325 RRP1BQ14684 758 aaKnown RBP14.18□□□□□ -0.14
CSMD2-202ENST00000338325 GORABQ5T7V8 394 aa14.18□□□□□ -0.14
CSMD2-202ENST00000338325 TBC1D9Q6ZT07 1266 aa14.18□□□□□ -0.14
CSMD2-202ENST00000338325 TEX11Q8IYF3 940 aa14.18□□□□□ -0.14
CSMD2-202ENST00000338325 C7orf61Q8IZ16 206 aa14.18□□□□□ -0.14
CSMD2-202ENST00000338325 LRCH3Q96II8 777 aa14.18□□□□□ -0.14
CSMD2-202ENST00000338325 HMX1Q9NP08 348 aaPredicted RBP14.18□□□□□ -0.14
CSMD2-202ENST00000338325 RAI14Q9P0K7 980 aa14.18□□□□□ -0.14
CSMD2-202ENST00000338325 HERC5Q9UII4 1024 aaKnown RBP14.18□□□□□ -0.14
CSMD2-202ENST00000338325 GJD2Q9UKL4 321 aa14.18□□□□□ -0.14
CSMD2-202ENST00000338325 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.18□□□□□ -0.14
CSMD2-202ENST00000338325 MYO5AQ9Y4I1 1855 aaKnown RBP14.17□□□□□ -0.14
CSMD2-202ENST00000338325 SLC17A8Q8NDX2 589 aa14.17□□□□□ -0.14
CSMD2-202ENST00000338325 GDF15Q99988 308 aa14.17□□□□□ -0.14
CSMD2-202ENST00000338325 NBPF3Q9H094 633 aa14.17□□□□□ -0.14
CSMD2-202ENST00000338325 MORF4L1Q9UBU8 362 aa14.17□□□□□ -0.14
CSMD2-202ENST00000338325 FRMPD3Q5JV73 1810 aa14.16□□□□□ -0.14
CSMD2-202ENST00000338325 BMP8BP34820 402 aa14.16□□□□□ -0.14
CSMD2-202ENST00000338325 TRIM32Q13049 653 aa14.16□□□□□ -0.14
CSMD2-202ENST00000338325 NOL10Q9BSC4 688 aaKnown RBP14.16□□□□□ -0.14
CSMD2-202ENST00000338325 LAMA3Q16787 3333 aa14.16□□□□□ -0.14
CSMD2-202ENST00000338325 MCAMP43121 646 aa14.15□□□□□ -0.14
CSMD2-202ENST00000338325 IRX3P78415 501 aaPredicted RBP14.15□□□□□ -0.14
CSMD2-202ENST00000338325 MTMR2Q13614 643 aa14.15□□□□□ -0.14
CSMD2-202ENST00000338325 SH3RF3Q8TEJ3 882 aaPredicted RBP14.15□□□□□ -0.14
CSMD2-202ENST00000338325 TRIB2Q92519 343 aa14.15□□□□□ -0.14
CSMD2-202ENST00000338325 WDR18Q9BV38 432 aa14.15□□□□□ -0.14
CSMD2-202ENST00000338325 C11orf49Q9H6J7 331 aa14.15□□□□□ -0.14
CSMD2-202ENST00000338325 LRP2BPQ9P2M1 347 aa14.15□□□□□ -0.14
CSMD2-202ENST00000338325 PI4KBQ9UBF8 816 aa14.15□□□□□ -0.14
CSMD2-202ENST00000338325 ZMYND8Q9ULU4 1186 aaPredicted RBP14.15□□□□□ -0.14
CSMD2-202ENST00000338325 COL6A3P12111 3177 aa14.15□□□□□ -0.14
CSMD2-202ENST00000338325 ASNSP08243 561 aa14.15□□□□□ -0.14
CSMD2-202ENST00000338325 UQCRFS1P1P0C7P4 283 aa14.15□□□□□ -0.14
CSMD2-202ENST00000338325 MNX1P50219 401 aaPredicted RBP14.15□□□□□ -0.14
CSMD2-202ENST00000338325 BACE1P56817 501 aa14.15□□□□□ -0.14
CSMD2-202ENST00000338325 SOCS4Q8WXH5 440 aa14.15□□□□□ -0.14
CSMD2-202ENST00000338325 ARHGAP45Q92619 1136 aa14.15□□□□□ -0.14
CSMD2-202ENST00000338325 DHX36Q9H2U1 1008 aaKnown RBP14.15□□□□□ -0.14
CSMD2-202ENST00000338325 TMOD4Q9NZQ9 345 aa14.15□□□□□ -0.14
CSMD2-202ENST00000338325 OGDHLQ9ULD0 1010 aa14.15□□□□□ -0.14
CSMD2-202ENST00000338325 DLL1O00548 723 aa14.14□□□□□ -0.15
CSMD2-202ENST00000338325 CYP2B6P20813 491 aa14.14□□□□□ -0.15
CSMD2-202ENST00000338325 HOXA7P31268 230 aaPredicted RBP14.14□□□□□ -0.15
CSMD2-202ENST00000338325 RARSP54136 660 aaKnown RBP14.14□□□□□ -0.15
CSMD2-202ENST00000338325 MAP3K21Q5TCX8 1036 aa14.14□□□□□ -0.15
CSMD2-202ENST00000338325 GPR153Q6NV75 609 aa14.14□□□□□ -0.15
CSMD2-202ENST00000338325 AATFQ9NY61 560 aaKnown RBP eCLIP14.14□□□□□ -0.15
CSMD2-202ENST00000338325 MYH1P12882 1939 aa14.14□□□□□ -0.15
CSMD2-202ENST00000338325 BAG3O95817 575 aa14.13□□□□□ -0.15
CSMD2-202ENST00000338325 PRKAR2AP13861 404 aaKnown RBP14.13□□□□□ -0.15
CSMD2-202ENST00000338325 PLCG2P16885 1265 aa14.13□□□□□ -0.15
CSMD2-202ENST00000338325 HERVK_113P62684 666 aa14.13□□□□□ -0.15
CSMD2-202ENST00000338325 G3BP1Q13283 466 aaKnown RBP eCLIP14.13□□□□□ -0.15
CSMD2-202ENST00000338325 NAA16Q6N069 864 aaPredicted RBP14.13□□□□□ -0.15
CSMD2-202ENST00000338325 P2RX7Q99572 595 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms