RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 PAG1Q9NWQ8 432 aa25.45■■□□□ 1.66
RAB28-203ENST00000338176 KCNH4Q9UQ05 1017 aa25.45■■□□□ 1.66
RAB28-203ENST00000338176 IGSF3O75054 1194 aa25.44■■□□□ 1.66
RAB28-203ENST00000338176 CAP1Q01518 475 aa25.44■■□□□ 1.66
RAB28-203ENST00000338176 MOGSQ13724 837 aa25.44■■□□□ 1.66
RAB28-203ENST00000338176 PICK1Q9NRD5 415 aa25.44■■□□□ 1.66
RAB28-203ENST00000338176 PHIPQ8WWQ0 1821 aa25.44■■□□□ 1.66
RAB28-203ENST00000338176 ZNF532Q9HCE3 1301 aa25.44■■□□□ 1.66
RAB28-203ENST00000338176 CCDC85CA6NKD9 419 aa25.44■■□□□ 1.66
RAB28-203ENST00000338176 CTNND1O60716 968 aaKnown RBP25.44■■□□□ 1.66
RAB28-203ENST00000338176 HAUS7Q99871 368 aa25.44■■□□□ 1.66
RAB28-203ENST00000338176 RIOK1Q9BRS2 568 aaKnown RBP25.44■■□□□ 1.66
RAB28-203ENST00000338176 TCRBV5S4A2TA0A5A2 114 aa25.43■■□□□ 1.66
RAB28-203ENST00000338176 DNAJC18Q9H819 358 aa25.43■■□□□ 1.66
RAB28-203ENST00000338176 MYH1P12882 1939 aa25.42■■□□□ 1.66
RAB28-203ENST00000338176 SHROOM1Q2M3G4 852 aaPredicted RBP25.42■■□□□ 1.66
RAB28-203ENST00000338176 PI4KBQ9UBF8 816 aa25.42■■□□□ 1.66
RAB28-203ENST00000338176 ATAD5Q96QE3 1844 aa25.42■■□□□ 1.66
RAB28-203ENST00000338176 USP5P45974 858 aa25.41■■□□□ 1.66
RAB28-203ENST00000338176 CD99L2Q8TCZ2 262 aa25.41■■□□□ 1.66
RAB28-203ENST00000338176 AFG3L2Q9Y4W6 797 aa25.41■■□□□ 1.66
RAB28-203ENST00000338176 MAGEB6P1A0A0J9YX57 407 aa25.41■■□□□ 1.66
RAB28-203ENST00000338176 JAG1P78504 1218 aa25.41■■□□□ 1.66
RAB28-203ENST00000338176 DHX36Q9H2U1 1008 aaKnown RBP25.41■■□□□ 1.66
RAB28-203ENST00000338176 ZFYVE28Q9HCC9 887 aa25.41■■□□□ 1.66
RAB28-203ENST00000338176 OTUD7AQ8TE49 926 aaPredicted RBP25.4■■□□□ 1.66
RAB28-203ENST00000338176 HTTP42858 3142 aa25.4■■□□□ 1.66
RAB28-203ENST00000338176 PTPRFP10586 1907 aa25.4■■□□□ 1.66
RAB28-203ENST00000338176 ECHDC1Q9NTX5 307 aa25.39■■□□□ 1.66
RAB28-203ENST00000338176 HERC5Q9UII4 1024 aaKnown RBP25.39■■□□□ 1.66
RAB28-203ENST00000338176 TRIM75PA6NK02 468 aa25.39■■□□□ 1.65
RAB28-203ENST00000338176 CXCL11O14625 94 aa25.39■■□□□ 1.65
RAB28-203ENST00000338176 CAP2P40123 477 aa25.39■■□□□ 1.65
RAB28-203ENST00000338176 GPAT2Q6NUI2 795 aa25.39■■□□□ 1.65
RAB28-203ENST00000338176 LCORLQ8N3X6 602 aa25.39■■□□□ 1.65
RAB28-203ENST00000338176 PDHXO00330 501 aa25.38■■□□□ 1.65
RAB28-203ENST00000338176 ADD2P35612 726 aa25.38■■□□□ 1.65
RAB28-203ENST00000338176 SP3Q02447 781 aa25.38■■□□□ 1.65
RAB28-203ENST00000338176 EVX2Q03828 476 aa25.38■■□□□ 1.65
RAB28-203ENST00000338176 CRACR2BQ8N4Y2 399 aaPredicted RBP25.38■■□□□ 1.65
RAB28-203ENST00000338176 ZSWIM8A7E2V4 1837 aa25.37■■□□□ 1.65
RAB28-203ENST00000338176 A0A0G2JLL6 359 aaPredicted RBP25.37■■□□□ 1.65
RAB28-203ENST00000338176 PRRT2Q7Z6L0 340 aaPredicted RBP25.37■■□□□ 1.65
RAB28-203ENST00000338176 ANKRD23Q86SG2 305 aa25.37■■□□□ 1.65
RAB28-203ENST00000338176 METTL16Q86W50 562 aaKnown RBP25.37■■□□□ 1.65
RAB28-203ENST00000338176 ARMT1Q9H993 441 aa25.37■■□□□ 1.65
RAB28-203ENST00000338176 MYH7P12883 1935 aa25.37■■□□□ 1.65
RAB28-203ENST00000338176 GDF11O95390 407 aa25.36■■□□□ 1.65
RAB28-203ENST00000338176 GADL1Q6ZQY3 521 aa25.36■■□□□ 1.65
RAB28-203ENST00000338176 SDR42E1Q8WUS8 393 aa25.36■■□□□ 1.65
RAB28-203ENST00000338176 TRIM17Q9Y577 477 aa25.36■■□□□ 1.65
RAB28-203ENST00000338176 ECM2O94769 699 aaPredicted RBP25.36■■□□□ 1.65
RAB28-203ENST00000338176 OTOP1Q7RTM1 612 aa25.36■■□□□ 1.65
RAB28-203ENST00000338176 FOXP4Q8IVH2 680 aaPredicted RBP25.36■■□□□ 1.65
RAB28-203ENST00000338176 NAV1Q8NEY1 1877 aa25.35■■□□□ 1.65
RAB28-203ENST00000338176 TLR2O60603 784 aa25.35■■□□□ 1.65
RAB28-203ENST00000338176 HLA-DOAP06340 250 aa25.35■■□□□ 1.65
RAB28-203ENST00000338176 TMED8Q6PL24 325 aaPredicted RBP25.35■■□□□ 1.65
RAB28-203ENST00000338176 CERS3Q8IU89 383 aa25.35■■□□□ 1.65
RAB28-203ENST00000338176 ZCCHC17Q9NP64 241 aaKnown RBP25.35■■□□□ 1.65
RAB28-203ENST00000338176 CPA4Q9UI42 421 aa25.35■■□□□ 1.65
RAB28-203ENST00000338176 HPS5Q9UPZ3 1129 aa25.35■■□□□ 1.65
RAB28-203ENST00000338176 DDX60LQ5H9U9 1706 aaKnown RBP25.35■■□□□ 1.65
RAB28-203ENST00000338176 PRKAB2O43741 272 aa25.34■■□□□ 1.65
RAB28-203ENST00000338176 PLCD1P51178 756 aa25.34■■□□□ 1.65
RAB28-203ENST00000338176 SPP2Q13103 211 aa25.34■■□□□ 1.65
RAB28-203ENST00000338176 EXOC6Q8TAG9 804 aa25.34■■□□□ 1.65
RAB28-203ENST00000338176 ERO1AQ96HE7 468 aa25.34■■□□□ 1.65
RAB28-203ENST00000338176 TRIM34Q9BYJ4 488 aa25.34■■□□□ 1.65
RAB28-203ENST00000338176 CENPFP49454 3210 aa25.34■■□□□ 1.65
RAB28-203ENST00000338176 MBD4O95243 580 aa25.33■■□□□ 1.65
RAB28-203ENST00000338176 CYP2C8P10632 490 aa25.33■■□□□ 1.65
RAB28-203ENST00000338176 CRNKL1Q9BZJ0 848 aaKnown RBP25.33■■□□□ 1.65
RAB28-203ENST00000338176 ARHGAP39Q9C0H5 1083 aa25.33■■□□□ 1.65
RAB28-203ENST00000338176 SUPT16HQ9Y5B9 1047 aaKnown RBP25.33■■□□□ 1.65
RAB28-203ENST00000338176 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.33■■□□□ 1.65
RAB28-203ENST00000338176 PKN2Q16513 984 aaKnown RBP25.32■■□□□ 1.64
RAB28-203ENST00000338176 GPATCH3Q96I76 525 aa25.32■■□□□ 1.64
RAB28-203ENST00000338176 CYP2D6P10635 497 aa25.31■■□□□ 1.64
RAB28-203ENST00000338176 TREML2Q5T2D2 321 aa25.31■■□□□ 1.64
RAB28-203ENST00000338176 FBXO46Q6PJ61 603 aaPredicted RBP25.31■■□□□ 1.64
RAB28-203ENST00000338176 ZNF280CQ8ND82 737 aa25.31■■□□□ 1.64
RAB28-203ENST00000338176 ADGRA2Q96PE1 1338 aa25.31■■□□□ 1.64
RAB28-203ENST00000338176 USP17L5A8MUK1 530 aa25.31■■□□□ 1.64
RAB28-203ENST00000338176 ANKRD45Q5TZF3 282 aa25.31■■□□□ 1.64
RAB28-203ENST00000338176 C17orf99Q6UX52 265 aa25.31■■□□□ 1.64
RAB28-203ENST00000338176 FASTKD5Q7L8L6 764 aaKnown RBP25.31■■□□□ 1.64
RAB28-203ENST00000338176 PUS7LQ9H0K6 701 aaKnown RBP25.31■■□□□ 1.64
RAB28-203ENST00000338176 SMIM22K7EJ46 135 aa25.3■■□□□ 1.64
RAB28-203ENST00000338176 HDAC1Q13547 482 aaPredicted RBP25.3■■□□□ 1.64
RAB28-203ENST00000338176 PI4K2BQ8TCG2 481 aa25.3■■□□□ 1.64
RAB28-203ENST00000338176 EFCC1Q9HA90 598 aa25.3■■□□□ 1.64
RAB28-203ENST00000338176 DCP1AQ9NPI6 582 aaPredicted RBP25.3■■□□□ 1.64
RAB28-203ENST00000338176 MCM9Q9NXL9 1143 aa25.3■■□□□ 1.64
RAB28-203ENST00000338176 SERPINB13Q9UIV8 391 aa25.3■■□□□ 1.64
RAB28-203ENST00000338176 BAZ2AQ9UIF9 1905 aaKnown RBP25.3■■□□□ 1.64
RAB28-203ENST00000338176 POLR3DP05423 398 aaPredicted RBP25.29■■□□□ 1.64
RAB28-203ENST00000338176 HMGCS2P54868 508 aa25.29■■□□□ 1.64
RAB28-203ENST00000338176 UBE3CQ15386 1083 aa25.29■■□□□ 1.64
RAB28-203ENST00000338176 ZBTB21Q9ULJ3 1066 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms