RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 SCN11AQ9UI33 1791 aa13.52□□□□□ -0.24
RBM39-202ENST00000338163 A0A0U1RQJ8 604 aa13.52□□□□□ -0.24
RBM39-202ENST00000338163 FOXR1Q6PIV2 292 aa13.52□□□□□ -0.24
RBM39-202ENST00000338163 FOXP4Q8IVH2 680 aaPredicted RBP13.52□□□□□ -0.24
RBM39-202ENST00000338163 ATRIPQ8WXE1 791 aa13.52□□□□□ -0.24
RBM39-202ENST00000338163 KCNH3Q9ULD8 1083 aa13.52□□□□□ -0.24
RBM39-202ENST00000338163 FAN1Q9Y2M0 1017 aa13.52□□□□□ -0.24
RBM39-202ENST00000338163 THSD7AQ9UPZ6 1657 aa13.52□□□□□ -0.24
RBM39-202ENST00000338163 CCDC175P0C221 793 aa13.52□□□□□ -0.25
RBM39-202ENST00000338163 KIF4BQ2VIQ3 1234 aa13.52□□□□□ -0.25
RBM39-202ENST00000338163 TAF7LQ5H9L4 462 aa13.52□□□□□ -0.25
RBM39-202ENST00000338163 OSBP2Q969R2 916 aa13.52□□□□□ -0.25
RBM39-202ENST00000338163 PLEKHA4Q9H4M7 779 aa13.52□□□□□ -0.25
RBM39-202ENST00000338163 HPS5Q9UPZ3 1129 aa13.52□□□□□ -0.25
RBM39-202ENST00000338163 BCL9O00512 1426 aa13.52□□□□□ -0.25
RBM39-202ENST00000338163 RNF113AO15541 343 aaKnown RBP13.51□□□□□ -0.25
RBM39-202ENST00000338163 BMP6P22004 513 aa13.51□□□□□ -0.25
RBM39-202ENST00000338163 HSP90B2PQ58FF3 399 aa13.51□□□□□ -0.25
RBM39-202ENST00000338163 GOLGA6L1Q8N7Z2 621 aa13.51□□□□□ -0.25
RBM39-202ENST00000338163 RNF216Q9NWF9 866 aaPredicted RBP13.51□□□□□ -0.25
RBM39-202ENST00000338163 RFX7Q2KHR2 1363 aa13.51□□□□□ -0.25
RBM39-202ENST00000338163 KIF5CO60282 957 aa13.51□□□□□ -0.25
RBM39-202ENST00000338163 BRD3Q15059 726 aa13.51□□□□□ -0.25
RBM39-202ENST00000338163 ZNF569Q5MCW4 686 aa13.51□□□□□ -0.25
RBM39-202ENST00000338163 HDXQ7Z353 690 aa13.51□□□□□ -0.25
RBM39-202ENST00000338163 MICU3Q86XE3 530 aa13.51□□□□□ -0.25
RBM39-202ENST00000338163 HOMEZQ8IX15 550 aa13.51□□□□□ -0.25
RBM39-202ENST00000338163 PNKPQ96T60 521 aa13.51□□□□□ -0.25
RBM39-202ENST00000338163 MRC1P22897 1456 aa13.51□□□□□ -0.25
RBM39-202ENST00000338163 EIF3JO75822 258 aaKnown RBP13.5□□□□□ -0.25
RBM39-202ENST00000338163 IRX3P78415 501 aaPredicted RBP13.5□□□□□ -0.25
RBM39-202ENST00000338163 FMR1Q06787 632 aaKnown RBP eCLIP13.5□□□□□ -0.256e-13■□□□□ 10.3
RBM39-202ENST00000338163 KLHL10Q6JEL2 608 aa13.5□□□□□ -0.25
RBM39-202ENST00000338163 SRGAP1Q7Z6B7 1085 aa13.5□□□□□ -0.25
RBM39-202ENST00000338163 GRAMD1CQ8IYS0 662 aa13.5□□□□□ -0.25
RBM39-202ENST00000338163 ADAMTS7Q9UKP4 1686 aa13.5□□□□□ -0.25
RBM39-202ENST00000338163 MYH15Q9Y2K3 1946 aa13.5□□□□□ -0.25
RBM39-202ENST00000338163 CUTAO60888 179 aa13.5□□□□□ -0.25
RBM39-202ENST00000338163 ERLIN1O75477 346 aa13.5□□□□□ -0.25
RBM39-202ENST00000338163 ATP2B1P20020 1258 aa13.5□□□□□ -0.25
RBM39-202ENST00000338163 KRT40Q6A162 431 aa13.5□□□□□ -0.25
RBM39-202ENST00000338163 FAM196AQ6ZSG2 479 aa13.5□□□□□ -0.25
RBM39-202ENST00000338163 ZNF594Q96JF6 807 aaPredicted RBP13.5□□□□□ -0.25
RBM39-202ENST00000338163 ANKZF1Q9H8Y5 726 aa13.5□□□□□ -0.25
RBM39-202ENST00000338163 ABCB6Q9NP58 842 aa13.5□□□□□ -0.25
RBM39-202ENST00000338163 SAMSN1Q9NSI8 373 aaKnown RBP13.5□□□□□ -0.25
RBM39-202ENST00000338163 TOGARAM1Q9Y4F4 1720 aa13.5□□□□□ -0.25
RBM39-202ENST00000338163 TRIM37O94972 964 aa13.49□□□□□ -0.25
RBM39-202ENST00000338163 FGAP02671 866 aa13.49□□□□□ -0.25
RBM39-202ENST00000338163 SNRPA1P09661 255 aaKnown RBP13.49□□□□□ -0.25
RBM39-202ENST00000338163 TRIM29Q14134 588 aa13.49□□□□□ -0.25
RBM39-202ENST00000338163 NOM1Q5C9Z4 860 aaKnown RBP13.49□□□□□ -0.25
RBM39-202ENST00000338163 BEND6Q5SZJ8 279 aaPredicted RBP13.49□□□□□ -0.25
RBM39-202ENST00000338163 RAI14Q9P0K7 980 aa13.49□□□□□ -0.25
RBM39-202ENST00000338163 DENND2AQ9ULE3 1009 aa13.49□□□□□ -0.25
RBM39-202ENST00000338163 HPSEQ9Y251 543 aa13.49□□□□□ -0.25
RBM39-202ENST00000338163 PALLDQ8WX93 1383 aa13.49□□□□□ -0.25
RBM39-202ENST00000338163 KDM3BQ7LBC6 1761 aa13.49□□□□□ -0.25
RBM39-202ENST00000338163 MAP2K7O14733 419 aa13.49□□□□□ -0.25
RBM39-202ENST00000338163 IVLP07476 585 aa13.49□□□□□ -0.25
RBM39-202ENST00000338163 METAP2P50579 478 aaKnown RBP eCLIP13.49□□□□□ -0.25
RBM39-202ENST00000338163 KCNQ4P56696 695 aa13.49□□□□□ -0.25
RBM39-202ENST00000338163 TBX2Q13207 712 aaPredicted RBP13.49□□□□□ -0.25
RBM39-202ENST00000338163 TTC39AQ5SRH9 613 aa13.49□□□□□ -0.25
RBM39-202ENST00000338163 PPFIBP1Q86W92 1011 aa13.49□□□□□ -0.25
RBM39-202ENST00000338163 NCOA7Q8NI08 942 aa13.49□□□□□ -0.25
RBM39-202ENST00000338163 UBE2Q2LH0YL09 131 aa13.48□□□□□ -0.25
RBM39-202ENST00000338163 ZNF213O14771 459 aa13.48□□□□□ -0.25
RBM39-202ENST00000338163 POLR2DO15514 142 aaKnown RBP13.48□□□□□ -0.25
RBM39-202ENST00000338163 GTF2A1P52655 376 aaPredicted RBP13.48□□□□□ -0.25
RBM39-202ENST00000338163 LRRC24Q50LG9 513 aa13.48□□□□□ -0.25
RBM39-202ENST00000338163 MYL10Q9BUA6 226 aa13.48□□□□□ -0.25
RBM39-202ENST00000338163 EFCC1Q9HA90 598 aa13.48□□□□□ -0.25
RBM39-202ENST00000338163 TOMM22Q9NS69 142 aa13.48□□□□□ -0.25
RBM39-202ENST00000338163 PSD3Q9NYI0 1048 aa13.48□□□□□ -0.25
RBM39-202ENST00000338163 HOOK1Q9UJC3 728 aaKnown RBP13.48□□□□□ -0.25
RBM39-202ENST00000338163 A0A1B0GUL7 405 aa13.48□□□□□ -0.25
RBM39-202ENST00000338163 AKR1B15C9JRZ8 316 aaPredicted RBP13.48□□□□□ -0.25
RBM39-202ENST00000338163 STX17P56962 302 aa13.48□□□□□ -0.25
RBM39-202ENST00000338163 ANTXR2P58335 489 aa13.48□□□□□ -0.25
RBM39-202ENST00000338163 TRDNQ13061 729 aa13.48□□□□□ -0.25
RBM39-202ENST00000338163 RESP18Q5W5W9 173 aa13.48□□□□□ -0.25
RBM39-202ENST00000338163 RGS22Q8NE09 1264 aa13.48□□□□□ -0.25
RBM39-202ENST00000338163 MAN1B1Q9UKM7 699 aa13.48□□□□□ -0.25
RBM39-202ENST00000338163 TEX33O43247 280 aa13.47□□□□□ -0.25
RBM39-202ENST00000338163 APPP05067 770 aa13.47□□□□□ -0.25
RBM39-202ENST00000338163 PRR29P0C7W0 189 aa13.47□□□□□ -0.25
RBM39-202ENST00000338163 VSNL1P62760 191 aa13.47□□□□□ -0.25
RBM39-202ENST00000338163 POSTNQ15063 836 aa13.47□□□□□ -0.25
RBM39-202ENST00000338163 RAD9BQ6WBX8 426 aa13.47□□□□□ -0.25
RBM39-202ENST00000338163 NFXL1Q6ZNB6 911 aa13.47□□□□□ -0.25
RBM39-202ENST00000338163 CEP112Q8N8E3 955 aa13.47□□□□□ -0.25
RBM39-202ENST00000338163 CDC5LQ99459 802 aaKnown RBP13.47□□□□□ -0.25
RBM39-202ENST00000338163 TEX13AQ9BXU3 409 aaPredicted RBP13.47□□□□□ -0.25
RBM39-202ENST00000338163 CDC23Q9UJX2 597 aa13.47□□□□□ -0.25
RBM39-202ENST00000338163 HEG1Q9ULI3 1381 aa13.47□□□□□ -0.25
RBM39-202ENST00000338163 CTAGE9A4FU28 777 aa13.47□□□□□ -0.25
RBM39-202ENST00000338163 PPP6R2O75170 966 aa13.47□□□□□ -0.25
RBM39-202ENST00000338163 CASP8Q14790 479 aa13.47□□□□□ -0.25
RBM39-202ENST00000338163 PTPAQ15257 358 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms