RNA–Protein interactions for RNA: ENST00000327047.5

CLRN1-202, Transcript of clarin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN1, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-202ENST00000327047 KRT32Q14532 448 aa8.41□□□□□ -1.06
CLRN1-202ENST00000327047 BRD3Q15059 726 aa8.41□□□□□ -1.06
CLRN1-202ENST00000327047 BEND6Q5SZJ8 279 aaPredicted RBP8.41□□□□□ -1.06
CLRN1-202ENST00000327047 JAKMIP3Q5VZ66 844 aa8.41□□□□□ -1.06
CLRN1-202ENST00000327047 OTUD7BQ6GQQ9 843 aa8.41□□□□□ -1.06
CLRN1-202ENST00000327047 HDXQ7Z353 690 aa8.41□□□□□ -1.06
CLRN1-202ENST00000327047 RAPGEF4Q8WZA2 1011 aa8.41□□□□□ -1.06
CLRN1-202ENST00000327047 BAG1Q99933 345 aaPredicted RBP8.41□□□□□ -1.06
CLRN1-202ENST00000327047 BICC1Q9H694 974 aaKnown RBP8.41□□□□□ -1.06
CLRN1-202ENST00000327047 DDX21Q9NR30 783 aaKnown RBP eCLIP8.41□□□□□ -1.06
CLRN1-202ENST00000327047 C9orf78Q9NZ63 289 aaPredicted RBP8.41□□□□□ -1.06
CLRN1-202ENST00000327047 NDUFB9Q9Y6M9 179 aa8.41□□□□□ -1.06
CLRN1-202ENST00000327047 SPATA31A1Q5TZJ5 1347 aa8.41□□□□□ -1.06
CLRN1-202ENST00000327047 ABCB7O75027 752 aa8.41□□□□□ -1.06
CLRN1-202ENST00000327047 PRR29P0C7W0 189 aa8.41□□□□□ -1.06
CLRN1-202ENST00000327047 ADKP55263 362 aaKnown RBP8.41□□□□□ -1.06
CLRN1-202ENST00000327047 LRRC31Q6UY01 552 aa8.41□□□□□ -1.06
CLRN1-202ENST00000327047 TMEM139Q8IV31 216 aa8.41□□□□□ -1.06
CLRN1-202ENST00000327047 VSTM4Q8IW00 320 aa8.41□□□□□ -1.06
CLRN1-202ENST00000327047 ZNF496Q96IT1 587 aaPredicted RBP8.41□□□□□ -1.06
CLRN1-202ENST00000327047 PNKPQ96T60 521 aa8.41□□□□□ -1.06
CLRN1-202ENST00000327047 ANKZF1Q9H8Y5 726 aa8.41□□□□□ -1.06
CLRN1-202ENST00000327047 ABCB6Q9NP58 842 aa8.41□□□□□ -1.06
CLRN1-202ENST00000327047 KIAA1522Q9P206 1035 aaPredicted RBP8.41□□□□□ -1.06
CLRN1-202ENST00000327047 HDAC5Q9UQL6 1122 aa8.41□□□□□ -1.06
CLRN1-202ENST00000327047 UTYO14607 1347 aa8.4□□□□□ -1.06
CLRN1-202ENST00000327047 NEDD4P46934 1319 aa8.4□□□□□ -1.06
CLRN1-202ENST00000327047 COL15A1P39059 1388 aa8.4□□□□□ -1.06
CLRN1-202ENST00000327047 MED23Q9ULK4 1368 aa8.4□□□□□ -1.06
CLRN1-202ENST00000327047 MYH15Q9Y2K3 1946 aa8.4□□□□□ -1.06
CLRN1-202ENST00000327047 CBFA2T2O43439 604 aa8.4□□□□□ -1.06
CLRN1-202ENST00000327047 PFKFB2O60825 505 aa8.4□□□□□ -1.06
CLRN1-202ENST00000327047 EIF3JO75822 258 aaKnown RBP8.4□□□□□ -1.06
CLRN1-202ENST00000327047 ALDH1L1O75891 902 aa8.4□□□□□ -1.06
CLRN1-202ENST00000327047 SASH1O94885 1247 aa8.4□□□□□ -1.06
CLRN1-202ENST00000327047 APPP05067 770 aa8.4□□□□□ -1.06
CLRN1-202ENST00000327047 IGKV5-2P06315 115 aa8.4□□□□□ -1.06
CLRN1-202ENST00000327047 CYP21A2P08686 494 aa8.4□□□□□ -1.06
CLRN1-202ENST00000327047 TATP17735 454 aaPredicted RBP8.4□□□□□ -1.06
CLRN1-202ENST00000327047 CORO7P57737 925 aa8.4□□□□□ -1.06
CLRN1-202ENST00000327047 CWF19L2Q2TBE0 894 aaKnown RBP8.4□□□□□ -1.06
CLRN1-202ENST00000327047 FCHSD1Q86WN1 690 aa8.4□□□□□ -1.06
CLRN1-202ENST00000327047 CNNM3Q8NE01 707 aa8.4□□□□□ -1.06
CLRN1-202ENST00000327047 SCN11AQ9UI33 1791 aa8.4□□□□□ -1.06
CLRN1-202ENST00000327047 RPS6KA5O75582 802 aa8.4□□□□□ -1.07
CLRN1-202ENST00000327047 WDHD1O75717 1129 aaPredicted RBP8.4□□□□□ -1.07
CLRN1-202ENST00000327047 TFRCP02786 760 aaKnown RBP8.4□□□□□ -1.07
CLRN1-202ENST00000327047 RHOXF2BP0C7M4 288 aa8.4□□□□□ -1.07
CLRN1-202ENST00000327047 PSEN1P49768 467 aa8.4□□□□□ -1.07
CLRN1-202ENST00000327047 G3BP1Q13283 466 aaKnown RBP eCLIP8.4□□□□□ -1.07
CLRN1-202ENST00000327047 HSP90B2PQ58FF3 399 aa8.4□□□□□ -1.07
CLRN1-202ENST00000327047 PRPF38BQ5VTL8 546 aaKnown RBP8.4□□□□□ -1.07
CLRN1-202ENST00000327047 ATL3Q6DD88 541 aa8.4□□□□□ -1.07
CLRN1-202ENST00000327047 SMYD5Q6GMV2 418 aa8.4□□□□□ -1.07
CLRN1-202ENST00000327047 CHST3Q7LGC8 479 aa8.4□□□□□ -1.07
CLRN1-202ENST00000327047 IFNL2Q8IZJ0 200 aa8.4□□□□□ -1.07
CLRN1-202ENST00000327047 MICALL1Q8N3F8 863 aa8.4□□□□□ -1.07
CLRN1-202ENST00000327047 LINC00301Q8NCQ3 95 aa8.4□□□□□ -1.07
CLRN1-202ENST00000327047 RHOXF2Q9BQY4 288 aa8.4□□□□□ -1.07
CLRN1-202ENST00000327047 LLPHQ9BRT6 129 aaKnown RBP8.4□□□□□ -1.07
CLRN1-202ENST00000327047 LZTFL1Q9NQ48 299 aa8.4□□□□□ -1.07
CLRN1-202ENST00000327047 SNRKQ9NRH2 765 aa8.4□□□□□ -1.07
CLRN1-202ENST00000327047 FANCLQ9NW38 375 aa8.4□□□□□ -1.07
CLRN1-202ENST00000327047 RTEL1Q9NZ71 1219 aa8.4□□□□□ -1.07
CLRN1-202ENST00000327047 MRC1P22897 1456 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 PKD1L3Q7Z443 1732 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 A0A1W2PQ27 194 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 A0A1W2PQ64 194 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 A0A1W2PQD8 194 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 GOLGA6L9A6NEM1 432 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 IKBKBO14920 756 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 CUTAO60888 179 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 CTCFP49711 727 aaPredicted RBP8.39□□□□□ -1.07
CLRN1-202ENST00000327047 SRGAP1Q7Z6B7 1085 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 FAM204AQ9H8W3 233 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 MKRN1Q9UHC7 482 aaKnown RBP8.39□□□□□ -1.07
CLRN1-202ENST00000327047 A0A0U1RQJ8 604 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 SPTLC2O15270 562 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 ERLIN1O75477 346 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 PFKFB1P16118 471 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 YBX3P16989 372 aaKnown RBP eCLIP8.39□□□□□ -1.07
CLRN1-202ENST00000327047 MARCKSP29966 332 aaPredicted RBP8.39□□□□□ -1.07
CLRN1-202ENST00000327047 MMP14P50281 582 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 MYL5Q02045 173 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 CASP8Q14790 479 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 MTF1Q14872 753 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 USPL1Q5W0Q7 1092 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 EP400NLQ6ZTU2 488 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 STOX1Q6ZVD7 989 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 LINS1Q8NG48 757 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 KLHDC4Q8TBB5 520 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 ATRIPQ8WXE1 791 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 DCAF5Q96JK2 942 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 MRPL44Q9H9J2 332 aaKnown RBP8.39□□□□□ -1.07
CLRN1-202ENST00000327047 L1RE1Q9UN81 338 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 SSUH2Q9Y2M2 353 aa8.39□□□□□ -1.07
CLRN1-202ENST00000327047 PNOCQ13519 176 aa8.38□□□□□ -1.07
CLRN1-202ENST00000327047 CT47A1Q5JQC4 288 aaPredicted RBP8.38□□□□□ -1.07
CLRN1-202ENST00000327047 HNRNPLLQ8WVV9 542 aaKnown RBP8.38□□□□□ -1.07
CLRN1-202ENST00000327047 GJB4Q9NTQ9 266 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms