RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 RALYLQ86SE5 291 aaKnown RBP18.09■□□□□ 0.49
PRPF3-201ENST00000324862 ZSWIM5Q9P217 1185 aa18.09■□□□□ 0.49
PRPF3-201ENST00000324862 HACL1Q9UJ83 578 aa18.09■□□□□ 0.49
PRPF3-201ENST00000324862 SPRYD3Q8NCJ5 442 aa18.08■□□□□ 0.49
PRPF3-201ENST00000324862 DDX60LQ5H9U9 1706 aaKnown RBP18.08■□□□□ 0.48
PRPF3-201ENST00000324862 MYO1BO43795 1136 aa18.08■□□□□ 0.48
PRPF3-201ENST00000324862 EXOSC10Q01780 885 aaKnown RBP18.08■□□□□ 0.48
PRPF3-201ENST00000324862 ANGEL2Q5VTE6 544 aaKnown RBP18.08■□□□□ 0.48
PRPF3-201ENST00000324862 PRAMEF18Q5VWM3 479 aa18.08■□□□□ 0.48
PRPF3-201ENST00000324862 Q6ZUG5 572 aa18.08■□□□□ 0.48
PRPF3-201ENST00000324862 DHX32Q7L7V1 743 aaKnown RBP18.08■□□□□ 0.48
PRPF3-201ENST00000324862 SENP2Q9HC62 589 aa18.08■□□□□ 0.48
PRPF3-201ENST00000324862 GLTPD2A6NH11 291 aa18.07■□□□□ 0.48
PRPF3-201ENST00000324862 RANBP6O60518 1105 aaKnown RBP18.07■□□□□ 0.48
PRPF3-201ENST00000324862 TRDNQ13061 729 aa18.07■□□□□ 0.48
PRPF3-201ENST00000324862 TOB2Q14106 344 aaPredicted RBP18.07■□□□□ 0.48
PRPF3-201ENST00000324862 DNAJC18Q9H819 358 aa18.07■□□□□ 0.48
PRPF3-201ENST00000324862 TMOD2Q9NZR1 351 aa18.07■□□□□ 0.48
PRPF3-201ENST00000324862 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.07■□□□□ 0.48
PRPF3-201ENST00000324862 LAMA4Q16363 1823 aa18.07■□□□□ 0.48
PRPF3-201ENST00000324862 PRC1O43663 620 aa18.07■□□□□ 0.48
PRPF3-201ENST00000324862 ST18O60284 1047 aa18.07■□□□□ 0.48
PRPF3-201ENST00000324862 NMT2O60551 498 aa18.07■□□□□ 0.48
PRPF3-201ENST00000324862 SHROOM1Q2M3G4 852 aaPredicted RBP18.07■□□□□ 0.48
PRPF3-201ENST00000324862 ECM29Q5VYK3 1845 aa18.06■□□□□ 0.48
PRPF3-201ENST00000324862 FOCADQ5VW36 1801 aa18.06■□□□□ 0.48
PRPF3-201ENST00000324862 LARGE1O95461 756 aa18.06■□□□□ 0.48
PRPF3-201ENST00000324862 LMOD1P29536 600 aaPredicted RBP18.06■□□□□ 0.48
PRPF3-201ENST00000324862 AMOTL1Q8IY63 956 aa18.06■□□□□ 0.48
PRPF3-201ENST00000324862 POTECB2RU33 542 aa18.06■□□□□ 0.48
PRPF3-201ENST00000324862 CDK8P49336 464 aa18.06■□□□□ 0.48
PRPF3-201ENST00000324862 RASA3Q14644 834 aa18.06■□□□□ 0.48
PRPF3-201ENST00000324862 CSRNP1Q96S65 589 aa18.06■□□□□ 0.48
PRPF3-201ENST00000324862 GGA3Q9NZ52 723 aa18.06■□□□□ 0.48
PRPF3-201ENST00000324862 ENTPD3O75355 529 aa18.05■□□□□ 0.48
PRPF3-201ENST00000324862 FGRP09769 529 aa18.05■□□□□ 0.48
PRPF3-201ENST00000324862 GABPAQ06546 454 aa18.05■□□□□ 0.48
PRPF3-201ENST00000324862 BRF1Q92994 677 aa18.05■□□□□ 0.48
PRPF3-201ENST00000324862 MYH1P12882 1939 aa18.05■□□□□ 0.48
PRPF3-201ENST00000324862 C16orf86Q6ZW13 317 aa18.04■□□□□ 0.48
PRPF3-201ENST00000324862 TTC6Q86TZ1 520 aa18.04■□□□□ 0.48
PRPF3-201ENST00000324862 RAB11FIP4Q86YS3 637 aa18.04■□□□□ 0.48
PRPF3-201ENST00000324862 IPO9Q96P70 1041 aaKnown RBP18.04■□□□□ 0.48
PRPF3-201ENST00000324862 RNF41Q9H4P4 317 aaPredicted RBP18.04■□□□□ 0.48
PRPF3-201ENST00000324862 MKNK2Q9HBH9 465 aa18.04■□□□□ 0.48
PRPF3-201ENST00000324862 FOXD4L1Q9NU39 408 aa18.04■□□□□ 0.48
PRPF3-201ENST00000324862 SERPINB13Q9UIV8 391 aa18.04■□□□□ 0.48
PRPF3-201ENST00000324862 ROBO3Q96MS0 1386 aa18.04■□□□□ 0.48
PRPF3-201ENST00000324862 MCM5P33992 734 aa18.04■□□□□ 0.48
PRPF3-201ENST00000324862 PDE4BQ07343 736 aa18.04■□□□□ 0.48
PRPF3-201ENST00000324862 MIGA2Q7L4E1 593 aa18.04■□□□□ 0.48
PRPF3-201ENST00000324862 FAM151AQ8WW52 585 aa18.04■□□□□ 0.48
PRPF3-201ENST00000324862 SNX21Q969T3 373 aa18.04■□□□□ 0.48
PRPF3-201ENST00000324862 ADARB2Q9NS39 739 aaKnown RBP18.04■□□□□ 0.48
PRPF3-201ENST00000324862 TPCN1Q9ULQ1 816 aa18.04■□□□□ 0.48
PRPF3-201ENST00000324862 LAMB1P07942 1786 aa18.04■□□□□ 0.48
PRPF3-201ENST00000324862 RASA1P20936 1047 aa18.03■□□□□ 0.48
PRPF3-201ENST00000324862 HSCBQ8IWL3 235 aa18.03■□□□□ 0.48
PRPF3-201ENST00000324862 ZNF526Q8TF50 670 aaPredicted RBP18.03■□□□□ 0.48
PRPF3-201ENST00000324862 L3MBTL3Q96JM7 780 aaPredicted RBP18.03■□□□□ 0.48
PRPF3-201ENST00000324862 KRT23Q9C075 422 aa18.03■□□□□ 0.48
PRPF3-201ENST00000324862 FZD1Q9UP38 647 aa18.03■□□□□ 0.48
PRPF3-201ENST00000324862 SLC3A2P08195 630 aaKnown RBP18.03■□□□□ 0.48
PRPF3-201ENST00000324862 HMGB1P09429 215 aaKnown RBP18.03■□□□□ 0.48
PRPF3-201ENST00000324862 FGD1P98174 961 aa18.03■□□□□ 0.48
PRPF3-201ENST00000324862 APOBRQ0VD83 1088 aa18.03■□□□□ 0.48
PRPF3-201ENST00000324862 CNNM2Q9H8M5 875 aa18.03■□□□□ 0.48
PRPF3-201ENST00000324862 PGAP2Q9UHJ9 254 aa18.03■□□□□ 0.48
PRPF3-201ENST00000324862 NPM3O75607 178 aaKnown RBP18.02■□□□□ 0.48
PRPF3-201ENST00000324862 HLA-DOAP06340 250 aa18.02■□□□□ 0.48
PRPF3-201ENST00000324862 POTEIP0CG38 1075 aa18.02■□□□□ 0.48
PRPF3-201ENST00000324862 POTEJP0CG39 1038 aa18.02■□□□□ 0.48
PRPF3-201ENST00000324862 SHMT1P34896 483 aa18.02■□□□□ 0.48
PRPF3-201ENST00000324862 TFAP4Q01664 338 aa18.02■□□□□ 0.48
PRPF3-201ENST00000324862 CLEC10AQ8IUN9 316 aa18.02■□□□□ 0.48
PRPF3-201ENST00000324862 ESR2Q92731 530 aa18.02■□□□□ 0.48
PRPF3-201ENST00000324862 DEFB129Q9H1M3 183 aa18.02■□□□□ 0.48
PRPF3-201ENST00000324862 PI4KBQ9UBF8 816 aa18.02■□□□□ 0.48
PRPF3-201ENST00000324862 TSPY2A6NKD2 308 aa18.02■□□□□ 0.47
PRPF3-201ENST00000324862 K7ELQ4 463 aaPredicted RBP18.02■□□□□ 0.47
PRPF3-201ENST00000324862 ORC4O43929 436 aa18.02■□□□□ 0.47
PRPF3-201ENST00000324862 EPHX2P34913 555 aa18.02■□□□□ 0.47
PRPF3-201ENST00000324862 STK3Q13188 491 aa18.02■□□□□ 0.47
PRPF3-201ENST00000324862 RRP1BQ14684 758 aaKnown RBP18.02■□□□□ 0.47
PRPF3-201ENST00000324862 CRACR2BQ8N4Y2 399 aaPredicted RBP18.02■□□□□ 0.47
PRPF3-201ENST00000324862 TMX3Q96JJ7 454 aa18.02■□□□□ 0.47
PRPF3-201ENST00000324862 DHX36Q9H2U1 1008 aaKnown RBP18.02■□□□□ 0.47
PRPF3-201ENST00000324862 ATRNL1Q5VV63 1379 aa18.01■□□□□ 0.47
PRPF3-201ENST00000324862 SIPA1L1O43166 1804 aa18.01■□□□□ 0.47
PRPF3-201ENST00000324862 ME3Q16798 604 aa18.01■□□□□ 0.47
PRPF3-201ENST00000324862 IGDCC4Q8TDY8 1250 aa18.01■□□□□ 0.47
PRPF3-201ENST00000324862 TEPSINQ96N21 525 aa18.01■□□□□ 0.47
PRPF3-201ENST00000324862 IL17RBQ9NRM6 502 aa18.01■□□□□ 0.47
PRPF3-201ENST00000324862 IFIT3O14879 490 aaKnown RBP18.01■□□□□ 0.47
PRPF3-201ENST00000324862 MMP14P50281 582 aa18.01■□□□□ 0.47
PRPF3-201ENST00000324862 EAPPQ56P03 285 aaPredicted RBP18.01■□□□□ 0.47
PRPF3-201ENST00000324862 FAM83AQ86UY5 434 aa18.01■□□□□ 0.47
PRPF3-201ENST00000324862 NECAB1Q8N987 351 aa18.01■□□□□ 0.47
PRPF3-201ENST00000324862 BRPF3Q9ULD4 1205 aa18.01■□□□□ 0.47
PRPF3-201ENST00000324862 ZC3H4Q9UPT8 1303 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms