RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 VPS36Q86VN1 386 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 C6orf50Q9HD87 102 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 ADCY9O60503 1353 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 TNKSO95271 1327 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 CHMP2AO43633 222 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 CALML3P27482 149 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 KIF5AQ12840 1032 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 SLF2Q8IX21 1173 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 ALS2CR12Q96Q35 445 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.62■□□□□ 0.57
CLIP4-201ENST00000320081 CYLC1P35663 651 aaPredicted RBP18.62■□□□□ 0.57
CLIP4-201ENST00000320081 MAP9Q49MG5 647 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 IFT81Q8WYA0 676 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 CTAGE1Q96RT6 745 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 TAF6LQ9Y6J9 622 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 TRAF5O00463 557 aa18.61■□□□□ 0.57
CLIP4-201ENST00000320081 TBCAO75347 108 aaKnown RBP18.61■□□□□ 0.57
CLIP4-201ENST00000320081 TMEM94Q12767 1356 aa18.61■□□□□ 0.57
CLIP4-201ENST00000320081 TRPM1Q7Z4N2 1603 aa18.61■□□□□ 0.57
CLIP4-201ENST00000320081 ST5P78524 1137 aa18.61■□□□□ 0.57
CLIP4-201ENST00000320081 SPAG1Q07617 926 aa18.61■□□□□ 0.57
CLIP4-201ENST00000320081 DCAF17Q5H9S7 520 aaPredicted RBP18.61■□□□□ 0.57
CLIP4-201ENST00000320081 DYDC1Q8WWB3 177 aa18.61■□□□□ 0.57
CLIP4-201ENST00000320081 RRP36Q96EU6 259 aaKnown RBP18.61■□□□□ 0.57
CLIP4-201ENST00000320081 SMIM23A6NLE4 172 aa18.61■□□□□ 0.57
CLIP4-201ENST00000320081 FGFR1OPO95684 399 aaKnown RBP18.61■□□□□ 0.57
CLIP4-201ENST00000320081 CNBD1Q8NA66 436 aa18.61■□□□□ 0.57
CLIP4-201ENST00000320081 PREX2Q70Z35 1606 aa18.61■□□□□ 0.57
CLIP4-201ENST00000320081 BMP15O95972 392 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 GNAQP50148 359 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 NLRP12P59046 1061 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 PDE8BO95263 885 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 PPARAQ07869 468 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 RAPGEF1Q13905 1077 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 NELFCDQ8IXH7 590 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 CAPN2P17655 700 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 RDXP35241 583 aaKnown RBP18.6■□□□□ 0.57
CLIP4-201ENST00000320081 GJC1P36383 396 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 DYNLL1P63167 89 aaKnown RBP18.6■□□□□ 0.57
CLIP4-201ENST00000320081 ZNF804AQ7Z570 1209 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 CSGALNACT2Q8N6G5 542 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 ZBTB38Q8NAP3 1195 aaPredicted RBP18.6■□□□□ 0.57
CLIP4-201ENST00000320081 MYCNP04198 464 aaPredicted RBP18.6■□□□□ 0.57
CLIP4-201ENST00000320081 POLA2Q14181 598 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 RTL9Q8NET4 1388 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 WDHD1O75717 1129 aaPredicted RBP18.59■□□□□ 0.57
CLIP4-201ENST00000320081 NAA30Q147X3 362 aaPredicted RBP18.59■□□□□ 0.57
CLIP4-201ENST00000320081 ZFYVE16Q7Z3T8 1539 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 TSPOAP1O95153 1857 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 CUTAO60888 179 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 ATP1A3P13637 1013 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 HLFQ16534 295 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 ZMYM1Q5SVZ6 1142 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 WWC2Q6AWC2 1192 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 FANCBQ8NB91 859 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 GOLGA1Q92805 767 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 DENND2AQ9ULE3 1009 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 SYNRGQ9UMZ2 1314 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 TMEM110-MUSTN1A8MSY1 372 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 APOA5Q6Q788 366 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 NOSTRINQ8IVI9 506 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 ZNF274Q96GC6 653 aaPredicted RBP18.59■□□□□ 0.57
CLIP4-201ENST00000320081 RPS8P62241 208 aaKnown RBP18.58■□□□□ 0.57
CLIP4-201ENST00000320081 SEPT7Q16181 437 aaKnown RBP18.58■□□□□ 0.57
CLIP4-201ENST00000320081 TXLNBQ8N3L3 684 aa18.58■□□□□ 0.57
CLIP4-201ENST00000320081 SMARCC2Q8TAQ2 1214 aa18.58■□□□□ 0.57
CLIP4-201ENST00000320081 FAM207AQ9NSI2 230 aaPredicted RBP18.58■□□□□ 0.57
CLIP4-201ENST00000320081 PTCH1Q13635 1447 aa18.58■□□□□ 0.57
CLIP4-201ENST00000320081 ZEB2O60315 1214 aa18.58■□□□□ 0.57
CLIP4-201ENST00000320081 PARP1P09874 1014 aaKnown RBP18.58■□□□□ 0.57
CLIP4-201ENST00000320081 NOC4LQ9BVI4 516 aaKnown RBP18.58■□□□□ 0.57
CLIP4-201ENST00000320081 ZNF500O60304 480 aaPredicted RBP18.57■□□□□ 0.56
CLIP4-201ENST00000320081 CASP1P29466 404 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 GSTO1P78417 241 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 CHRNDQ07001 517 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 NLRC4Q9NPP4 1024 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 INF2Q27J81 1249 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 FAM114A1Q8IWE2 563 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 EFCAB6Q5THR3 1501 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 TRAPPC3LQ5T215 181 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 KRT86O43790 486 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 ARID4AP29374 1257 aaPredicted RBP18.57■□□□□ 0.56
CLIP4-201ENST00000320081 USH1GQ495M9 461 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 LRRC8AQ8IWT6 810 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 SCLT1Q96NL6 688 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 NEO1Q92859 1461 aa18.56■□□□□ 0.56
CLIP4-201ENST00000320081 ATL3Q6DD88 541 aa18.56■□□□□ 0.56
CLIP4-201ENST00000320081 ANKRD13CQ8N6S4 541 aa18.56■□□□□ 0.56
CLIP4-201ENST00000320081 SSH2Q76I76 1423 aa18.56■□□□□ 0.56
CLIP4-201ENST00000320081 BIN2Q9UBW5 565 aaPredicted RBP18.56■□□□□ 0.56
CLIP4-201ENST00000320081 TOB2Q14106 344 aaPredicted RBP18.56■□□□□ 0.56
CLIP4-201ENST00000320081 BBXQ8WY36 941 aaPredicted RBP18.56■□□□□ 0.56
CLIP4-201ENST00000320081 GPR101Q96P66 508 aaPredicted RBP18.56■□□□□ 0.56
CLIP4-201ENST00000320081 SHTN1A0MZ66 631 aa18.55■□□□□ 0.56
CLIP4-201ENST00000320081 TLDC2A0PJX2 215 aa18.55■□□□□ 0.56
CLIP4-201ENST00000320081 SPDYE3A6NKU9 549 aa18.55■□□□□ 0.56
CLIP4-201ENST00000320081 ERO1AQ96HE7 468 aa18.55■□□□□ 0.56
CLIP4-201ENST00000320081 MLH3Q9UHC1 1453 aa18.55■□□□□ 0.56
CLIP4-201ENST00000320081 ERVV-2B6SEH9 535 aa18.55■□□□□ 0.56
CLIP4-201ENST00000320081 GNA11P29992 359 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms