RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 VPS36Q86VN1 386 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 C6orf50Q9HD87 102 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 ADCY9O60503 1353 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 TNKSO95271 1327 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 CHMP2AO43633 222 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 CALML3P27482 149 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 KIF5AQ12840 1032 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 SLF2Q8IX21 1173 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 ALS2CR12Q96Q35 445 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.62■□□□□ 0.57
CLIP4-201ENST00000320081 CYLC1P35663 651 aaPredicted RBP18.62■□□□□ 0.57
CLIP4-201ENST00000320081 MAP9Q49MG5 647 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 IFT81Q8WYA0 676 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 CTAGE1Q96RT6 745 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 TAF6LQ9Y6J9 622 aa18.62■□□□□ 0.57
CLIP4-201ENST00000320081 TRAF5O00463 557 aa18.61■□□□□ 0.57
CLIP4-201ENST00000320081 TBCAO75347 108 aaKnown RBP18.61■□□□□ 0.57
CLIP4-201ENST00000320081 TMEM94Q12767 1356 aa18.61■□□□□ 0.57
CLIP4-201ENST00000320081 TRPM1Q7Z4N2 1603 aa18.61■□□□□ 0.57
CLIP4-201ENST00000320081 ST5P78524 1137 aa18.61■□□□□ 0.57
CLIP4-201ENST00000320081 SPAG1Q07617 926 aa18.61■□□□□ 0.57
CLIP4-201ENST00000320081 DCAF17Q5H9S7 520 aaPredicted RBP18.61■□□□□ 0.57
CLIP4-201ENST00000320081 DYDC1Q8WWB3 177 aa18.61■□□□□ 0.57
CLIP4-201ENST00000320081 RRP36Q96EU6 259 aaKnown RBP18.61■□□□□ 0.57
CLIP4-201ENST00000320081 SMIM23A6NLE4 172 aa18.61■□□□□ 0.57
CLIP4-201ENST00000320081 FGFR1OPO95684 399 aaKnown RBP18.61■□□□□ 0.57
CLIP4-201ENST00000320081 CNBD1Q8NA66 436 aa18.61■□□□□ 0.57
CLIP4-201ENST00000320081 PREX2Q70Z35 1606 aa18.61■□□□□ 0.57
CLIP4-201ENST00000320081 BMP15O95972 392 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 GNAQP50148 359 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 NLRP12P59046 1061 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 PDE8BO95263 885 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 PPARAQ07869 468 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 RAPGEF1Q13905 1077 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 NELFCDQ8IXH7 590 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 CAPN2P17655 700 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 RDXP35241 583 aaKnown RBP18.6■□□□□ 0.57
CLIP4-201ENST00000320081 GJC1P36383 396 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 DYNLL1P63167 89 aaKnown RBP18.6■□□□□ 0.57
CLIP4-201ENST00000320081 ZNF804AQ7Z570 1209 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 CSGALNACT2Q8N6G5 542 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 ZBTB38Q8NAP3 1195 aaPredicted RBP18.6■□□□□ 0.57
CLIP4-201ENST00000320081 MYCNP04198 464 aaPredicted RBP18.6■□□□□ 0.57
CLIP4-201ENST00000320081 POLA2Q14181 598 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 RTL9Q8NET4 1388 aa18.6■□□□□ 0.57
CLIP4-201ENST00000320081 WDHD1O75717 1129 aaPredicted RBP18.59■□□□□ 0.57
CLIP4-201ENST00000320081 NAA30Q147X3 362 aaPredicted RBP18.59■□□□□ 0.57
CLIP4-201ENST00000320081 ZFYVE16Q7Z3T8 1539 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 TSPOAP1O95153 1857 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 CUTAO60888 179 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 ATP1A3P13637 1013 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 HLFQ16534 295 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 ZMYM1Q5SVZ6 1142 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 WWC2Q6AWC2 1192 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 FANCBQ8NB91 859 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 GOLGA1Q92805 767 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 DENND2AQ9ULE3 1009 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 SYNRGQ9UMZ2 1314 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 TMEM110-MUSTN1A8MSY1 372 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 APOA5Q6Q788 366 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 NOSTRINQ8IVI9 506 aa18.59■□□□□ 0.57
CLIP4-201ENST00000320081 ZNF274Q96GC6 653 aaPredicted RBP18.59■□□□□ 0.57
CLIP4-201ENST00000320081 RPS8P62241 208 aaKnown RBP18.58■□□□□ 0.57
CLIP4-201ENST00000320081 SEPT7Q16181 437 aaKnown RBP18.58■□□□□ 0.57
CLIP4-201ENST00000320081 TXLNBQ8N3L3 684 aa18.58■□□□□ 0.57
CLIP4-201ENST00000320081 SMARCC2Q8TAQ2 1214 aa18.58■□□□□ 0.57
CLIP4-201ENST00000320081 FAM207AQ9NSI2 230 aaPredicted RBP18.58■□□□□ 0.57
CLIP4-201ENST00000320081 PTCH1Q13635 1447 aa18.58■□□□□ 0.57
CLIP4-201ENST00000320081 ZEB2O60315 1214 aa18.58■□□□□ 0.57
CLIP4-201ENST00000320081 PARP1P09874 1014 aaKnown RBP18.58■□□□□ 0.57
CLIP4-201ENST00000320081 NOC4LQ9BVI4 516 aaKnown RBP18.58■□□□□ 0.57
CLIP4-201ENST00000320081 ZNF500O60304 480 aaPredicted RBP18.57■□□□□ 0.56
CLIP4-201ENST00000320081 CASP1P29466 404 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 GSTO1P78417 241 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 CHRNDQ07001 517 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 NLRC4Q9NPP4 1024 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 INF2Q27J81 1249 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 FAM114A1Q8IWE2 563 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 EFCAB6Q5THR3 1501 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 TRAPPC3LQ5T215 181 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 KRT86O43790 486 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 ARID4AP29374 1257 aaPredicted RBP18.57■□□□□ 0.56
CLIP4-201ENST00000320081 USH1GQ495M9 461 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 LRRC8AQ8IWT6 810 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 SCLT1Q96NL6 688 aa18.57■□□□□ 0.56
CLIP4-201ENST00000320081 NEO1Q92859 1461 aa18.56■□□□□ 0.56
CLIP4-201ENST00000320081 ATL3Q6DD88 541 aa18.56■□□□□ 0.56
CLIP4-201ENST00000320081 ANKRD13CQ8N6S4 541 aa18.56■□□□□ 0.56
CLIP4-201ENST00000320081 SSH2Q76I76 1423 aa18.56■□□□□ 0.56
CLIP4-201ENST00000320081 BIN2Q9UBW5 565 aaPredicted RBP18.56■□□□□ 0.56
CLIP4-201ENST00000320081 TOB2Q14106 344 aaPredicted RBP18.56■□□□□ 0.56
CLIP4-201ENST00000320081 BBXQ8WY36 941 aaPredicted RBP18.56■□□□□ 0.56
CLIP4-201ENST00000320081 GPR101Q96P66 508 aaPredicted RBP18.56■□□□□ 0.56
CLIP4-201ENST00000320081 SHTN1A0MZ66 631 aa18.55■□□□□ 0.56
CLIP4-201ENST00000320081 TLDC2A0PJX2 215 aa18.55■□□□□ 0.56
CLIP4-201ENST00000320081 SPDYE3A6NKU9 549 aa18.55■□□□□ 0.56
CLIP4-201ENST00000320081 ERO1AQ96HE7 468 aa18.55■□□□□ 0.56
CLIP4-201ENST00000320081 MLH3Q9UHC1 1453 aa18.55■□□□□ 0.56
CLIP4-201ENST00000320081 ERVV-2B6SEH9 535 aa18.55■□□□□ 0.56
CLIP4-201ENST00000320081 GNA11P29992 359 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms