RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 PRKAG2Q9UGJ0 569 aa16.55■□□□□ 0.24
SYCN-201ENST00000318438 MAST2Q6P0Q8 1798 aa16.55■□□□□ 0.24
SYCN-201ENST00000318438 BDP1A6H8Y1 2624 aa16.55■□□□□ 0.24
SYCN-201ENST00000318438 PHIPQ8WWQ0 1821 aa16.54■□□□□ 0.24
SYCN-201ENST00000318438 VAMP4O75379 141 aa16.54■□□□□ 0.24
SYCN-201ENST00000318438 PRDX5P30044 214 aa16.54■□□□□ 0.24
SYCN-201ENST00000318438 CCL14Q16627 93 aa16.54■□□□□ 0.24
SYCN-201ENST00000318438 VGLL2Q8N8G2 317 aa16.54■□□□□ 0.24
SYCN-201ENST00000318438 PROCA1Q8NCQ7 364 aaPredicted RBP16.54■□□□□ 0.24
SYCN-201ENST00000318438 NUDT12Q9BQG2 462 aa16.54■□□□□ 0.24
SYCN-201ENST00000318438 DOCK2Q92608 1830 aa16.54■□□□□ 0.24
SYCN-201ENST00000318438 DOCK1Q14185 1865 aa16.53■□□□□ 0.24
SYCN-201ENST00000318438 DDTLA6NHG4 134 aaPredicted RBP16.53■□□□□ 0.24
SYCN-201ENST00000318438 XRCC5P13010 732 aaKnown RBP16.53■□□□□ 0.24
SYCN-201ENST00000318438 HMGCS2P54868 508 aa16.53■□□□□ 0.24
SYCN-201ENST00000318438 MAP3K10Q02779 954 aa16.53■□□□□ 0.24
SYCN-201ENST00000318438 EXOSC9Q06265 439 aaKnown RBP16.53■□□□□ 0.24
SYCN-201ENST00000318438 SPP2Q13103 211 aa16.53■□□□□ 0.24
SYCN-201ENST00000318438 LTBP2Q14767 1821 aa16.53■□□□□ 0.24
SYCN-201ENST00000318438 PDE8BO95263 885 aa16.52■□□□□ 0.24
SYCN-201ENST00000318438 RTP1P59025 263 aa16.52■□□□□ 0.24
SYCN-201ENST00000318438 WDR66Q8TBY9 1149 aa16.52■□□□□ 0.24
SYCN-201ENST00000318438 SOCS4Q8WXH5 440 aa16.52■□□□□ 0.24
SYCN-201ENST00000318438 KAZALD1Q96I82 304 aa16.52■□□□□ 0.24
SYCN-201ENST00000318438 SUCLG2Q96I99 432 aa16.52■□□□□ 0.24
SYCN-201ENST00000318438 MORF4L1Q9UBU8 362 aa16.52■□□□□ 0.24
SYCN-201ENST00000318438 ATP11BQ9Y2G3 1177 aa16.52■□□□□ 0.24
SYCN-201ENST00000318438 GRIN2CQ14957 1233 aa16.51■□□□□ 0.23
SYCN-201ENST00000318438 BADQ92934 168 aa16.51■□□□□ 0.23
SYCN-201ENST00000318438 PRDM5Q9NQX1 630 aaPredicted RBP16.51■□□□□ 0.23
SYCN-201ENST00000318438 C9orf78Q9NZ63 289 aaPredicted RBP16.51■□□□□ 0.23
SYCN-201ENST00000318438 FAM196BA6NMK8 535 aa16.5■□□□□ 0.23
SYCN-201ENST00000318438 ENTPD3O75355 529 aa16.5■□□□□ 0.23
SYCN-201ENST00000318438 PABPC4Q13310 644 aaKnown RBP eCLIP16.5■□□□□ 0.23
SYCN-201ENST00000318438 TRMT44Q8IYL2 757 aaKnown RBP16.5■□□□□ 0.23
SYCN-201ENST00000318438 ADAMTS19Q8TE59 1207 aa16.5■□□□□ 0.23
SYCN-201ENST00000318438 USP6NLQ92738 828 aa16.5■□□□□ 0.23
SYCN-201ENST00000318438 IDI2Q9BXS1 227 aa16.5■□□□□ 0.23
SYCN-201ENST00000318438 TXNRD2Q9NNW7 524 aa16.5■□□□□ 0.23
SYCN-201ENST00000318438 DDX4Q9NQI0 724 aaKnown RBP16.5■□□□□ 0.23
SYCN-201ENST00000318438 RFX7Q2KHR2 1363 aa16.5■□□□□ 0.23
SYCN-201ENST00000318438 LOC285556D6RIA3 1793 aa16.49■□□□□ 0.23
SYCN-201ENST00000318438 LDHBP07195 334 aaKnown RBP16.49■□□□□ 0.23
SYCN-201ENST00000318438 PDE3AQ14432 1141 aa16.49■□□□□ 0.23
SYCN-201ENST00000318438 ZNF280CQ8ND82 737 aa16.49■□□□□ 0.23
SYCN-201ENST00000318438 PPM1EQ8WY54 764 aa16.49■□□□□ 0.23
SYCN-201ENST00000318438 E9PSI1 815 aa16.48■□□□□ 0.23
SYCN-201ENST00000318438 IFIT1P09914 478 aaKnown RBP16.48■□□□□ 0.23
SYCN-201ENST00000318438 FGFR2P21802 821 aa16.48■□□□□ 0.23
SYCN-201ENST00000318438 RGS2P41220 211 aa16.48■□□□□ 0.23
SYCN-201ENST00000318438 PICALMQ13492 652 aa16.48■□□□□ 0.23
SYCN-201ENST00000318438 PUM3Q15397 648 aaKnown RBP16.48■□□□□ 0.23
SYCN-201ENST00000318438 DIEXFQ68CQ4 756 aaKnown RBP16.48■□□□□ 0.23
SYCN-201ENST00000318438 KLHDC4Q8TBB5 520 aa16.48■□□□□ 0.23
SYCN-201ENST00000318438 KIF16BQ96L93 1317 aa16.47■□□□□ 0.23
SYCN-201ENST00000318438 IRX3P78415 501 aaPredicted RBP16.47■□□□□ 0.23
SYCN-201ENST00000318438 MORN1Q5T089 497 aa16.47■□□□□ 0.23
SYCN-201ENST00000318438 GPRC5AQ8NFJ5 357 aa16.47■□□□□ 0.23
SYCN-201ENST00000318438 ASB2Q96Q27 587 aa16.47■□□□□ 0.23
SYCN-201ENST00000318438 UHRF1Q96T88 793 aaPredicted RBP16.47■□□□□ 0.23
SYCN-201ENST00000318438 P2RX7Q99572 595 aaKnown RBP16.47■□□□□ 0.23
SYCN-201ENST00000318438 APBA2Q99767 749 aa16.47■□□□□ 0.23
SYCN-201ENST00000318438 PORCNQ9H237 461 aa16.47■□□□□ 0.23
SYCN-201ENST00000318438 BICC1Q9H694 974 aaKnown RBP16.47■□□□□ 0.23
SYCN-201ENST00000318438 DNM1LO00429 736 aa16.46■□□□□ 0.23
SYCN-201ENST00000318438 MAPK4P31152 587 aa16.46■□□□□ 0.23
SYCN-201ENST00000318438 GPR142Q7Z601 462 aa16.46■□□□□ 0.23
SYCN-201ENST00000318438 ATXN2LQ8WWM7 1075 aaKnown RBP16.46■□□□□ 0.23
SYCN-201ENST00000318438 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.46■□□□□ 0.23
SYCN-201ENST00000318438 DDX20Q9UHI6 824 aaKnown RBP16.46■□□□□ 0.23
SYCN-201ENST00000318438 XIRP2A4UGR9 3374 aa16.46■□□□□ 0.23
SYCN-201ENST00000318438 FRMPD3Q5JV73 1810 aa16.46■□□□□ 0.23
SYCN-201ENST00000318438 NBPF7P0C2Y1 421 aaPredicted RBP16.45■□□□□ 0.22
SYCN-201ENST00000318438 CNGA1P29973 690 aa16.45■□□□□ 0.22
SYCN-201ENST00000318438 HERVK_113P62684 666 aa16.45■□□□□ 0.22
SYCN-201ENST00000318438 Q3C1V9 767 aa16.45■□□□□ 0.22
SYCN-201ENST00000318438 TRIM60Q495X7 471 aa16.45■□□□□ 0.22
SYCN-201ENST00000318438 GJC2Q5T442 439 aaPredicted RBP16.45■□□□□ 0.22
SYCN-201ENST00000318438 SH3RF1Q7Z6J0 888 aa16.45■□□□□ 0.22
SYCN-201ENST00000318438 LPAR1Q92633 364 aa16.45■□□□□ 0.22
SYCN-201ENST00000318438 RNPC3Q96LT9 517 aaKnown RBP16.45■□□□□ 0.22
SYCN-201ENST00000318438 PDLIM7Q9NR12 457 aa16.45■□□□□ 0.22
SYCN-201ENST00000318438 FLRT1Q9NZU1 646 aa16.45■□□□□ 0.22
SYCN-201ENST00000318438 NCOR1O75376 2440 aa16.45■□□□□ 0.22
SYCN-201ENST00000318438 TRIM43BA6NCK2 446 aa16.44■□□□□ 0.22
SYCN-201ENST00000318438 EPHB4P54760 987 aa16.44■□□□□ 0.22
SYCN-201ENST00000318438 SLFN5Q08AF3 891 aa16.44■□□□□ 0.22
SYCN-201ENST00000318438 RRP1BQ14684 758 aaKnown RBP16.44■□□□□ 0.22
SYCN-201ENST00000318438 SH3D19Q5HYK7 790 aa16.44■□□□□ 0.22
SYCN-201ENST00000318438 SLC4A10Q6U841 1118 aa16.44■□□□□ 0.22
SYCN-201ENST00000318438 PLEKHH3Q7Z736 793 aa16.44■□□□□ 0.22
SYCN-201ENST00000318438 CCAR1Q8IX12 1150 aaKnown RBP16.44■□□□□ 0.22
SYCN-201ENST00000318438 ANKRD44Q8N8A2 993 aa16.44■□□□□ 0.22
SYCN-201ENST00000318438 TRIM43Q96BQ3 446 aaPredicted RBP16.44■□□□□ 0.22
SYCN-201ENST00000318438 OSBPL5Q9H0X9 879 aaPredicted RBP16.44■□□□□ 0.22
SYCN-201ENST00000318438 THEGQ9P2T0 379 aa16.44■□□□□ 0.22
SYCN-201ENST00000318438 RBPJLQ9UBG7 517 aa16.44■□□□□ 0.22
SYCN-201ENST00000318438 CHD9Q3L8U1 2897 aa16.43■□□□□ 0.22
SYCN-201ENST00000318438 ALDH1L1O75891 902 aa16.43■□□□□ 0.22
SYCN-201ENST00000318438 SLC5A1P13866 664 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms