RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 UBR2Q8IWV8 1755 aa18.38■□□□□ 0.53
CRAT-201ENST00000318080 PAPPAQ13219 1627 aa18.37■□□□□ 0.53
CRAT-201ENST00000318080 MYCNP04198 464 aaPredicted RBP18.37■□□□□ 0.53
CRAT-201ENST00000318080 KCNJ6P48051 423 aa18.37■□□□□ 0.53
CRAT-201ENST00000318080 MYL5Q02045 173 aa18.37■□□□□ 0.53
CRAT-201ENST00000318080 PPP2R3AQ06190 1150 aa18.37■□□□□ 0.53
CRAT-201ENST00000318080 PTPAQ15257 358 aa18.37■□□□□ 0.53
CRAT-201ENST00000318080 LRRFIP1Q32MZ4 808 aaKnown RBP18.37■□□□□ 0.53
CRAT-201ENST00000318080 VSTM4Q8IW00 320 aa18.37■□□□□ 0.53
CRAT-201ENST00000318080 DHX58Q96C10 678 aa18.37■□□□□ 0.53
CRAT-201ENST00000318080 GPR108Q9NPR9 543 aa18.37■□□□□ 0.53
CRAT-201ENST00000318080 HPSEQ9Y251 543 aa18.37■□□□□ 0.53
CRAT-201ENST00000318080 DHX16O60231 1041 aaKnown RBP18.37■□□□□ 0.53
CRAT-201ENST00000318080 TTC39AQ5SRH9 613 aa18.37■□□□□ 0.53
CRAT-201ENST00000318080 KRT40Q6A162 431 aa18.37■□□□□ 0.53
CRAT-201ENST00000318080 RRP15Q9Y3B9 282 aaKnown RBP18.37■□□□□ 0.53
CRAT-201ENST00000318080 EFCAB8A8MWE9 144 aa18.36■□□□□ 0.53
CRAT-201ENST00000318080 NCOA7Q8NI08 942 aa18.36■□□□□ 0.53
CRAT-201ENST00000318080 PDE11AQ9HCR9 933 aa18.36■□□□□ 0.53
CRAT-201ENST00000318080 PCDHA5Q9Y5H7 936 aa18.36■□□□□ 0.53
CRAT-201ENST00000318080 ARFGEF2Q9Y6D5 1785 aa18.36■□□□□ 0.53
CRAT-201ENST00000318080 PHLPP2Q6ZVD8 1323 aa18.36■□□□□ 0.53
CRAT-201ENST00000318080 GRIN1Q05586 938 aa18.36■□□□□ 0.53
CRAT-201ENST00000318080 MTF1Q14872 753 aa18.36■□□□□ 0.53
CRAT-201ENST00000318080 ZNF827Q17R98 1081 aa18.36■□□□□ 0.53
CRAT-201ENST00000318080 RALYLQ86SE5 291 aaKnown RBP18.36■□□□□ 0.53
CRAT-201ENST00000318080 TBC1D10CQ8IV04 446 aa18.36■□□□□ 0.53
CRAT-201ENST00000318080 SEPT12Q8IYM1 358 aa18.36■□□□□ 0.53
CRAT-201ENST00000318080 CEP126Q9P2H0 1117 aa18.36■□□□□ 0.53
CRAT-201ENST00000318080 PPP2R2CQ9Y2T4 447 aa18.36■□□□□ 0.53
CRAT-201ENST00000318080 GPAA1O43292 621 aa18.36■□□□□ 0.53
CRAT-201ENST00000318080 TOP1P11387 765 aaKnown RBP18.36■□□□□ 0.53
CRAT-201ENST00000318080 NOP2P46087 812 aaKnown RBP18.36■□□□□ 0.53
CRAT-201ENST00000318080 CCDC158Q5M9N0 1113 aa18.36■□□□□ 0.53
CRAT-201ENST00000318080 MAP3K14Q99558 947 aa18.36■□□□□ 0.53
CRAT-201ENST00000318080 ARFGAP3Q9NP61 516 aa18.36■□□□□ 0.53
CRAT-201ENST00000318080 TRPC5Q9UL62 973 aaPredicted RBP18.36■□□□□ 0.53
CRAT-201ENST00000318080 ZNF213O14771 459 aa18.35■□□□□ 0.53
CRAT-201ENST00000318080 CASQ1P31415 396 aa18.35■□□□□ 0.53
CRAT-201ENST00000318080 ATRNO75882 1429 aa18.35■□□□□ 0.53
CRAT-201ENST00000318080 LONRF2Q1L5Z9 754 aa18.35■□□□□ 0.53
CRAT-201ENST00000318080 MUM1L1Q5H9M0 696 aa18.35■□□□□ 0.53
CRAT-201ENST00000318080 MICU3Q86XE3 530 aa18.35■□□□□ 0.53
CRAT-201ENST00000318080 SRLQ86TD4 932 aa18.34■□□□□ 0.53
CRAT-201ENST00000318080 TRMT44Q8IYL2 757 aaKnown RBP18.34■□□□□ 0.53
CRAT-201ENST00000318080 SYNE4Q8N205 404 aa18.34■□□□□ 0.53
CRAT-201ENST00000318080 NRDCO43847 1150 aa18.34■□□□□ 0.53
CRAT-201ENST00000318080 FMR1Q06787 632 aaKnown RBP eCLIP18.34■□□□□ 0.53
CRAT-201ENST00000318080 GRAMD1CQ8IYS0 662 aa18.34■□□□□ 0.53
CRAT-201ENST00000318080 GPS2Q13227 327 aa18.33■□□□□ 0.53
CRAT-201ENST00000318080 SMIM5Q71RC9 77 aa18.33■□□□□ 0.53
CRAT-201ENST00000318080 CREBRFQ8IUR6 639 aa18.33■□□□□ 0.53
CRAT-201ENST00000318080 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.33■□□□□ 0.53
CRAT-201ENST00000318080 RANBP6O60518 1105 aaKnown RBP18.33■□□□□ 0.52
CRAT-201ENST00000318080 METAP2P50579 478 aaKnown RBP eCLIP18.33■□□□□ 0.52
CRAT-201ENST00000318080 RESP18Q5W5W9 173 aa18.33■□□□□ 0.52
CRAT-201ENST00000318080 B4E1Z4 1266 aa18.32■□□□□ 0.52
CRAT-201ENST00000318080 PRR29P0C7W0 189 aa18.32■□□□□ 0.52
CRAT-201ENST00000318080 APPBP2Q92624 585 aa18.32■□□□□ 0.52
CRAT-201ENST00000318080 LZTFL1Q9NQ48 299 aa18.32■□□□□ 0.52
CRAT-201ENST00000318080 CNNM3Q8NE01 707 aa18.32■□□□□ 0.52
CRAT-201ENST00000318080 MED15Q96RN5 788 aa18.32■□□□□ 0.52
CRAT-201ENST00000318080 TSPYL1Q9H0U9 437 aa18.32■□□□□ 0.52
CRAT-201ENST00000318080 KCNH3Q9ULD8 1083 aa18.32■□□□□ 0.52
CRAT-201ENST00000318080 FAM193AP78312 1265 aa18.31■□□□□ 0.52
CRAT-201ENST00000318080 SEC31BQ9NQW1 1179 aa18.31■□□□□ 0.52
CRAT-201ENST00000318080 THSD7AQ9UPZ6 1657 aa18.31■□□□□ 0.52
CRAT-201ENST00000318080 MAP3K9P80192 1104 aa18.31■□□□□ 0.52
CRAT-201ENST00000318080 PACS2Q86VP3 889 aa18.31■□□□□ 0.52
CRAT-201ENST00000318080 CCDC12Q8WUD4 166 aaPredicted RBP18.31■□□□□ 0.52
CRAT-201ENST00000318080 FAM89AQ96GI7 184 aa18.31■□□□□ 0.52
CRAT-201ENST00000318080 ANGEL1Q9UNK9 670 aaKnown RBP18.31■□□□□ 0.52
CRAT-201ENST00000318080 FAN1Q9Y2M0 1017 aa18.31■□□□□ 0.52
CRAT-201ENST00000318080 APPP05067 770 aa18.3■□□□□ 0.52
CRAT-201ENST00000318080 GUCY1A2P33402 732 aa18.3■□□□□ 0.52
CRAT-201ENST00000318080 PSEN1P49768 467 aa18.3■□□□□ 0.52
CRAT-201ENST00000318080 ITPK1Q13572 414 aa18.3■□□□□ 0.52
CRAT-201ENST00000318080 APOA5Q6Q788 366 aa18.3■□□□□ 0.52
CRAT-201ENST00000318080 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.3■□□□□ 0.52
CRAT-201ENST00000318080 TC2NQ8N9U0 490 aa18.3■□□□□ 0.52
CRAT-201ENST00000318080 PNKPQ96T60 521 aa18.3■□□□□ 0.52
CRAT-201ENST00000318080 BAG1Q99933 345 aaPredicted RBP18.3■□□□□ 0.52
CRAT-201ENST00000318080 MRPL44Q9H9J2 332 aaKnown RBP18.3■□□□□ 0.52
CRAT-201ENST00000318080 FAM217BQ9NTX9 383 aaPredicted RBP18.3■□□□□ 0.52
CRAT-201ENST00000318080 ZBTB1Q9Y2K1 713 aa18.3■□□□□ 0.52
CRAT-201ENST00000318080 MRFAP1Q9Y605 127 aa18.3■□□□□ 0.52
CRAT-201ENST00000318080 ZMYM6O95789 1325 aa18.3■□□□□ 0.52
CRAT-201ENST00000318080 CBFA2T2O43439 604 aa18.3■□□□□ 0.52
CRAT-201ENST00000318080 CIAO1O76071 339 aa18.3■□□□□ 0.52
CRAT-201ENST00000318080 RHOXF2BP0C7M4 288 aa18.3■□□□□ 0.52
CRAT-201ENST00000318080 MCAMP43121 646 aa18.3■□□□□ 0.52
CRAT-201ENST00000318080 MDM2Q00987 491 aaPredicted RBP18.3■□□□□ 0.52
CRAT-201ENST00000318080 SART3Q15020 963 aaKnown RBP18.3■□□□□ 0.52
CRAT-201ENST00000318080 CCDC57Q2TAC2 916 aa18.3■□□□□ 0.52
CRAT-201ENST00000318080 OLFM4Q6UX06 510 aa18.3■□□□□ 0.52
CRAT-201ENST00000318080 RSRC2Q7L4I2 434 aaKnown RBP18.3■□□□□ 0.52
CRAT-201ENST00000318080 RHOXF2Q9BQY4 288 aa18.3■□□□□ 0.52
CRAT-201ENST00000318080 LOC102724159A0A0B4J2E5 919 aa18.3■□□□□ 0.52
CRAT-201ENST00000318080 SH2B2O14492 632 aaPredicted RBP18.3■□□□□ 0.52
CRAT-201ENST00000318080 PPP6R2O75170 966 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms