RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 DDX4Q9NQI0 724 aaKnown RBP18.47■□□□□ 0.55
CALR-201ENST00000316448 DDX49Q9Y6V7 483 aaKnown RBP18.47■□□□□ 0.55
CALR-201ENST00000316448 FLT1P17948 1338 aa18.46■□□□□ 0.55
CALR-201ENST00000316448 ORC4O43929 436 aa18.46■□□□□ 0.55
CALR-201ENST00000316448 WDHD1O75717 1129 aaPredicted RBP18.46■□□□□ 0.55
CALR-201ENST00000316448 F13A1P00488 732 aa18.46■□□□□ 0.55
CALR-201ENST00000316448 FAM47AQ5JRC9 791 aa18.46■□□□□ 0.55
CALR-201ENST00000316448 APOA5Q6Q788 366 aa18.46■□□□□ 0.55
CALR-201ENST00000316448 LLPHQ9BRT6 129 aaKnown RBP18.46■□□□□ 0.55
CALR-201ENST00000316448 FAM217BQ9NTX9 383 aaPredicted RBP18.46■□□□□ 0.55
CALR-201ENST00000316448 CD2APQ9Y5K6 639 aa18.46■□□□□ 0.55
CALR-201ENST00000316448 RANBP6O60518 1105 aaKnown RBP18.45■□□□□ 0.54
CALR-201ENST00000316448 FDPSP14324 419 aaKnown RBP18.45■□□□□ 0.54
CALR-201ENST00000316448 PLCG2P16885 1265 aa18.45■□□□□ 0.54
CALR-201ENST00000316448 LARP1BQ659C4 914 aaKnown RBP18.45■□□□□ 0.54
CALR-201ENST00000316448 CDC42EP5Q6NZY7 148 aa18.45■□□□□ 0.54
CALR-201ENST00000316448 LARGE2Q8N3Y3 721 aa18.45■□□□□ 0.54
CALR-201ENST00000316448 SLC44A5Q8NCS7 719 aa18.45■□□□□ 0.54
CALR-201ENST00000316448 ESR2Q92731 530 aa18.45■□□□□ 0.54
CALR-201ENST00000316448 USP40Q9NVE5 1235 aa18.45■□□□□ 0.54
CALR-201ENST00000316448 LAMB1P07942 1786 aa18.45■□□□□ 0.54
CALR-201ENST00000316448 PTPDC1A2A3K4 754 aa18.45■□□□□ 0.54
CALR-201ENST00000316448 PRPF40AO75400 957 aaKnown RBP18.45■□□□□ 0.54
CALR-201ENST00000316448 PDCP20941 246 aa18.45■□□□□ 0.54
CALR-201ENST00000316448 CDC27P30260 824 aa18.45■□□□□ 0.54
CALR-201ENST00000316448 CERS3Q8IU89 383 aa18.45■□□□□ 0.54
CALR-201ENST00000316448 NLGN2Q8NFZ4 835 aa18.45■□□□□ 0.54
CALR-201ENST00000316448 TEKT1Q969V4 418 aa18.45■□□□□ 0.54
CALR-201ENST00000316448 BRCA1P38398 1863 aaKnown RBP18.44■□□□□ 0.54
CALR-201ENST00000316448 NMT2O60551 498 aa18.44■□□□□ 0.54
CALR-201ENST00000316448 RAD17O75943 681 aa18.44■□□□□ 0.54
CALR-201ENST00000316448 ADD1P35611 737 aaKnown RBP18.44■□□□□ 0.54
CALR-201ENST00000316448 FOXD4L6Q3SYB3 417 aaPredicted RBP18.44■□□□□ 0.54
CALR-201ENST00000316448 FOXD4L3Q6VB84 417 aaPredicted RBP18.44■□□□□ 0.54
CALR-201ENST00000316448 TMEM87AQ8NBN3 555 aa18.44■□□□□ 0.54
CALR-201ENST00000316448 MRIQ9BWK5 157 aa18.44■□□□□ 0.54
CALR-201ENST00000316448 NAV1Q8NEY1 1877 aa18.43■□□□□ 0.54
CALR-201ENST00000316448 NFKBIEO00221 500 aa18.43■□□□□ 0.54
CALR-201ENST00000316448 POLR3DP05423 398 aaPredicted RBP18.43■□□□□ 0.54
CALR-201ENST00000316448 PCP11498 1178 aaKnown RBP18.43■□□□□ 0.54
CALR-201ENST00000316448 WTAPQ15007 396 aa18.43■□□□□ 0.54
CALR-201ENST00000316448 NFXL1Q6ZNB6 911 aa18.43■□□□□ 0.54
CALR-201ENST00000316448 CCDC144CPQ8IYA2 1237 aa18.43■□□□□ 0.54
CALR-201ENST00000316448 ENAHQ8N8S7 591 aaPredicted RBP18.43■□□□□ 0.54
CALR-201ENST00000316448 ZDHHC15Q96MV8 337 aa18.43■□□□□ 0.54
CALR-201ENST00000316448 TNKSO95271 1327 aa18.43■□□□□ 0.54
CALR-201ENST00000316448 ROBO3Q96MS0 1386 aa18.43■□□□□ 0.54
CALR-201ENST00000316448 PICALMQ13492 652 aa18.43■□□□□ 0.54
CALR-201ENST00000316448 GPT2Q8TD30 523 aa18.43■□□□□ 0.54
CALR-201ENST00000316448 ZSCAN10Q96SZ4 725 aaPredicted RBP18.43■□□□□ 0.54
CALR-201ENST00000316448 MTA3Q9BTC8 594 aa18.43■□□□□ 0.54
CALR-201ENST00000316448 ISY1Q9ULR0 285 aaKnown RBP18.43■□□□□ 0.54
CALR-201ENST00000316448 ATP6V1DQ9Y5K8 247 aa18.43■□□□□ 0.54
CALR-201ENST00000316448 TCHHQ07283 1943 aa18.43■□□□□ 0.54
CALR-201ENST00000316448 DDX60LQ5H9U9 1706 aaKnown RBP18.42■□□□□ 0.54
CALR-201ENST00000316448 PSMD14O00487 310 aa18.42■□□□□ 0.54
CALR-201ENST00000316448 IARSP41252 1262 aaKnown RBP18.42■□□□□ 0.54
CALR-201ENST00000316448 NFIAQ12857 509 aa18.42■□□□□ 0.54
CALR-201ENST00000316448 SOGA3Q5TF21 947 aa18.42■□□□□ 0.54
CALR-201ENST00000316448 CDC37L1Q7L3B6 337 aa18.42■□□□□ 0.54
CALR-201ENST00000316448 MICU3Q86XE3 530 aa18.42■□□□□ 0.54
CALR-201ENST00000316448 ZFPM1Q8IX07 1006 aa18.42■□□□□ 0.54
CALR-201ENST00000316448 GMLQ99445 158 aa18.42■□□□□ 0.54
CALR-201ENST00000316448 BCS1LQ9Y276 419 aa18.42■□□□□ 0.54
CALR-201ENST00000316448 VPS37CA5D8V6 355 aaPredicted RBP18.41■□□□□ 0.54
CALR-201ENST00000316448 ZBTB43O43298 467 aa18.41■□□□□ 0.54
CALR-201ENST00000316448 VIL1P09327 827 aaKnown RBP18.41■□□□□ 0.54
CALR-201ENST00000316448 PRELPP51888 382 aa18.41■□□□□ 0.54
CALR-201ENST00000316448 CACNB3P54284 484 aa18.41■□□□□ 0.54
CALR-201ENST00000316448 HDLBPQ00341 1268 aaKnown RBP18.41■□□□□ 0.54
CALR-201ENST00000316448 PDE4BQ07343 736 aa18.41■□□□□ 0.54
CALR-201ENST00000316448 UBAC1Q9BSL1 405 aa18.41■□□□□ 0.54
CALR-201ENST00000316448 CCDC69A6NI79 296 aa18.41■□□□□ 0.54
CALR-201ENST00000316448 SLC3A2P08195 630 aaKnown RBP18.41■□□□□ 0.54
CALR-201ENST00000316448 METAP2P50579 478 aaKnown RBP eCLIP18.41■□□□□ 0.54
CALR-201ENST00000316448 FOSBP53539 338 aa18.41■□□□□ 0.54
CALR-201ENST00000316448 NTRK3Q16288 839 aa18.41■□□□□ 0.54
CALR-201ENST00000316448 RSBN1LQ6PCB5 846 aaPredicted RBP18.41■□□□□ 0.54
CALR-201ENST00000316448 VPS33BQ9H267 617 aa18.41■□□□□ 0.54
CALR-201ENST00000316448 IL17RBQ9NRM6 502 aa18.41■□□□□ 0.54
CALR-201ENST00000316448 ZBTB12Q9Y330 459 aaPredicted RBP18.41■□□□□ 0.54
CALR-201ENST00000316448 SLC12A7Q9Y666 1083 aa18.41■□□□□ 0.54
CALR-201ENST00000316448 MBD3O95983 291 aa18.4■□□□□ 0.54
CALR-201ENST00000316448 SLURP2P0DP57 97 aa18.4■□□□□ 0.54
CALR-201ENST00000316448 RASA1P20936 1047 aa18.4■□□□□ 0.54
CALR-201ENST00000316448 CDK8P49336 464 aa18.4■□□□□ 0.54
CALR-201ENST00000316448 TFAP4Q01664 338 aa18.4■□□□□ 0.54
CALR-201ENST00000316448 FOCADQ5VW36 1801 aa18.4■□□□□ 0.54
CALR-201ENST00000316448 FER1L6Q2WGJ9 1857 aa18.39■□□□□ 0.54
CALR-201ENST00000316448 GOLGA6L3A6NEY3 463 aa18.39■□□□□ 0.53
CALR-201ENST00000316448 GOLGA8AA7E2F4 631 aa18.39■□□□□ 0.53
CALR-201ENST00000316448 SART3Q15020 963 aaKnown RBP18.39■□□□□ 0.53
CALR-201ENST00000316448 RCSD1Q6JBY9 416 aa18.39■□□□□ 0.53
CALR-201ENST00000316448 C16orf86Q6ZW13 317 aa18.39■□□□□ 0.53
CALR-201ENST00000316448 ZNF654Q8IZM8 581 aa18.39■□□□□ 0.53
CALR-201ENST00000316448 SERPINA10Q9UK55 444 aa18.39■□□□□ 0.53
CALR-201ENST00000316448 ZNRF3Q9ULT6 936 aa18.39■□□□□ 0.53
CALR-201ENST00000316448 MYH1P12882 1939 aa18.39■□□□□ 0.53
CALR-201ENST00000316448 ERICH2A1L162 156 aa18.39■□□□□ 0.53
CALR-201ENST00000316448 RBM5P52756 815 aaKnown RBP eCLIP18.39■□□□□ 0.534e-26■□□□□ 8.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms