RNA–Protein interactions for RNA: ENST00000316398.4

CCDC89-201, Transcript of coiled-coil domain containing 89, humanhuman

APPRIS P1 BASIC

Gene CCDC89, Length 1,412 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89-201ENST00000316398 ZNF280CQ8ND82 737 aa14.18□□□□□ -0.14
CCDC89-201ENST00000316398 NSUN4Q96CB9 384 aaKnown RBP14.18□□□□□ -0.14
CCDC89-201ENST00000316398 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.18□□□□□ -0.14
CCDC89-201ENST00000316398 DOCK3Q8IZD9 2030 aa14.17□□□□□ -0.14
CCDC89-201ENST00000316398 GNAI3P08754 354 aa14.17□□□□□ -0.14
CCDC89-201ENST00000316398 BMP8BP34820 402 aa14.17□□□□□ -0.14
CCDC89-201ENST00000316398 TFCP2Q12800 502 aa14.17□□□□□ -0.14
CCDC89-201ENST00000316398 PABPC4Q13310 644 aaKnown RBP eCLIP14.17□□□□□ -0.14
CCDC89-201ENST00000316398 PICALMQ13492 652 aa14.17□□□□□ -0.14
CCDC89-201ENST00000316398 TREML2Q5T2D2 321 aa14.17□□□□□ -0.14
CCDC89-201ENST00000316398 SPATA5Q8NB90 893 aa14.17□□□□□ -0.14
CCDC89-201ENST00000316398 PAWRQ96IZ0 340 aaKnown RBP14.17□□□□□ -0.14
CCDC89-201ENST00000316398 HMG20BQ9P0W2 317 aa14.17□□□□□ -0.14
CCDC89-201ENST00000316398 SRGAP3O43295 1099 aa14.16□□□□□ -0.14
CCDC89-201ENST00000316398 NECAB2Q7Z6G3 386 aa14.16□□□□□ -0.14
CCDC89-201ENST00000316398 METTL16Q86W50 562 aaKnown RBP14.16□□□□□ -0.14
CCDC89-201ENST00000316398 MEIS3Q99687 375 aa14.16□□□□□ -0.14
CCDC89-201ENST00000316398 WDR18Q9BV38 432 aa14.16□□□□□ -0.14
CCDC89-201ENST00000316398 HERC5Q9UII4 1024 aaKnown RBP14.16□□□□□ -0.14
CCDC89-201ENST00000316398 A0A0C4DFX4 3053 aa14.16□□□□□ -0.14
CCDC89-201ENST00000316398 USP17L5A8MUK1 530 aa14.15□□□□□ -0.14
CCDC89-201ENST00000316398 IGSF3O75054 1194 aa14.15□□□□□ -0.14
CCDC89-201ENST00000316398 HOXA7P31268 230 aaPredicted RBP14.15□□□□□ -0.14
CCDC89-201ENST00000316398 GPR153Q6NV75 609 aa14.15□□□□□ -0.14
CCDC89-201ENST00000316398 FOXP4Q8IVH2 680 aaPredicted RBP14.15□□□□□ -0.14
CCDC89-201ENST00000316398 NEUROD6Q96NK8 337 aa14.15□□□□□ -0.14
CCDC89-201ENST00000316398 ASCC2Q9H1I8 757 aaPredicted RBP14.15□□□□□ -0.14
CCDC89-201ENST00000316398 DHX36Q9H2U1 1008 aaKnown RBP14.15□□□□□ -0.14
CCDC89-201ENST00000316398 PI4KBQ9UBF8 816 aa14.15□□□□□ -0.14
CCDC89-201ENST00000316398 MORF4L1Q9UBU8 362 aa14.15□□□□□ -0.14
CCDC89-201ENST00000316398 STAP2Q9UGK3 403 aa14.15□□□□□ -0.14
CCDC89-201ENST00000316398 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.15□□□□□ -0.14
CCDC89-201ENST00000316398 RPTORQ8N122 1335 aa14.15□□□□□ -0.14
CCDC89-201ENST00000316398 PHIPQ8WWQ0 1821 aa14.15□□□□□ -0.14
CCDC89-201ENST00000316398 COL2A1P02458 1487 aaPredicted RBP14.15□□□□□ -0.14
CCDC89-201ENST00000316398 ARID4AP29374 1257 aaPredicted RBP14.15□□□□□ -0.14
CCDC89-201ENST00000316398 RRP1BQ14684 758 aaKnown RBP14.15□□□□□ -0.14
CCDC89-201ENST00000316398 TBC1D9Q6ZT07 1266 aa14.15□□□□□ -0.14
CCDC89-201ENST00000316398 CCDC84Q86UT8 332 aaPredicted RBP14.15□□□□□ -0.14
CCDC89-201ENST00000316398 GDF15Q99988 308 aa14.15□□□□□ -0.14
CCDC89-201ENST00000316398 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.15□□□□□ -0.14
CCDC89-201ENST00000316398 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.15□□□□□ -0.14
CCDC89-201ENST00000316398 PTPRFP10586 1907 aa14.14□□□□□ -0.15
CCDC89-201ENST00000316398 C19orf81C9J6K1 198 aa14.14□□□□□ -0.15
CCDC89-201ENST00000316398 HMGCRP04035 888 aa14.14□□□□□ -0.15
CCDC89-201ENST00000316398 XRCC5P13010 732 aaKnown RBP14.14□□□□□ -0.15
CCDC89-201ENST00000316398 RARSP54136 660 aaKnown RBP14.14□□□□□ -0.15
CCDC89-201ENST00000316398 HMGCS2P54868 508 aa14.14□□□□□ -0.15
CCDC89-201ENST00000316398 PPP4CP60510 307 aa14.14□□□□□ -0.15
CCDC89-201ENST00000316398 HMX1Q9NP08 348 aaPredicted RBP14.14□□□□□ -0.15
CCDC89-201ENST00000316398 GINM1Q9NU53 330 aa14.14□□□□□ -0.15
CCDC89-201ENST00000316398 MNX1P50219 401 aaPredicted RBP14.13□□□□□ -0.15
CCDC89-201ENST00000316398 BACE1P56817 501 aa14.13□□□□□ -0.15
CCDC89-201ENST00000316398 NBPF3Q9H094 633 aa14.13□□□□□ -0.15
CCDC89-201ENST00000316398 AS3MTQ9HBK9 375 aa14.13□□□□□ -0.15
CCDC89-201ENST00000316398 OGDHLQ9ULD0 1010 aa14.13□□□□□ -0.15
CCDC89-201ENST00000316398 DOCK2Q92608 1830 aa14.12□□□□□ -0.15
CCDC89-201ENST00000316398 FAM196BA6NMK8 535 aa14.12□□□□□ -0.15
CCDC89-201ENST00000316398 BAG3O95817 575 aa14.12□□□□□ -0.15
CCDC89-201ENST00000316398 UQCRFS1P1P0C7P4 283 aa14.12□□□□□ -0.15
CCDC89-201ENST00000316398 GORABQ5T7V8 394 aa14.12□□□□□ -0.15
CCDC89-201ENST00000316398 MAP3K21Q5TCX8 1036 aa14.12□□□□□ -0.15
CCDC89-201ENST00000316398 P2RX7Q99572 595 aaKnown RBP14.12□□□□□ -0.15
CCDC89-201ENST00000316398 RAI14Q9P0K7 980 aa14.12□□□□□ -0.15
CCDC89-201ENST00000316398 LAMA3Q16787 3333 aa14.12□□□□□ -0.15
CCDC89-201ENST00000316398 SOX1O00570 391 aaPredicted RBP14.11□□□□□ -0.15
CCDC89-201ENST00000316398 IPO8O15397 1037 aaKnown RBP14.11□□□□□ -0.15
CCDC89-201ENST00000316398 ASNSP08243 561 aa14.11□□□□□ -0.15
CCDC89-201ENST00000316398 PLCG2P16885 1265 aa14.11□□□□□ -0.15
CCDC89-201ENST00000316398 MCAMP43121 646 aa14.11□□□□□ -0.15
CCDC89-201ENST00000316398 G3BP1Q13283 466 aaKnown RBP eCLIP14.11□□□□□ -0.15
CCDC89-201ENST00000316398 PI16Q6UXB8 463 aa14.11□□□□□ -0.15
CCDC89-201ENST00000316398 TRMT44Q8IYL2 757 aaKnown RBP14.11□□□□□ -0.15
CCDC89-201ENST00000316398 SLC17A8Q8NDX2 589 aa14.11□□□□□ -0.15
CCDC89-201ENST00000316398 GPRC5AQ8NFJ5 357 aa14.11□□□□□ -0.15
CCDC89-201ENST00000316398 DIS3LQ8TF46 1054 aaKnown RBP14.11□□□□□ -0.15
CCDC89-201ENST00000316398 GPR108Q9NPR9 543 aa14.11□□□□□ -0.15
CCDC89-201ENST00000316398 LRP2BPQ9P2M1 347 aa14.11□□□□□ -0.15
CCDC89-201ENST00000316398 TAOK2Q9UL54 1235 aa14.11□□□□□ -0.15
CCDC89-201ENST00000316398 COL6A3P12111 3177 aa14.11□□□□□ -0.15
CCDC89-201ENST00000316398 DOCK1Q14185 1865 aa14.11□□□□□ -0.15
CCDC89-201ENST00000316398 GNAI2P04899 355 aa14.1□□□□□ -0.15
CCDC89-201ENST00000316398 LRIT3Q3SXY7 679 aa14.1□□□□□ -0.15
CCDC89-201ENST00000316398 TEX11Q8IYF3 940 aa14.1□□□□□ -0.15
CCDC89-201ENST00000316398 SH3RF3Q8TEJ3 882 aaPredicted RBP14.1□□□□□ -0.15
CCDC89-201ENST00000316398 USP6NLQ92738 828 aa14.1□□□□□ -0.15
CCDC89-201ENST00000316398 ZNF512BQ96KM6 892 aaPredicted RBP14.1□□□□□ -0.15
CCDC89-201ENST00000316398 RBPJLQ9UBG7 517 aa14.1□□□□□ -0.15
CCDC89-201ENST00000316398 USP17L10C9JJH3 530 aa14.09□□□□□ -0.15
CCDC89-201ENST00000316398 JAG1P78504 1218 aa14.09□□□□□ -0.15
CCDC89-201ENST00000316398 TRIM32Q13049 653 aa14.09□□□□□ -0.15
CCDC89-201ENST00000316398 NUDT12Q9BQG2 462 aa14.09□□□□□ -0.15
CCDC89-201ENST00000316398 C11orf49Q9H6J7 331 aa14.09□□□□□ -0.15
CCDC89-201ENST00000316398 TMOD4Q9NZQ9 345 aa14.09□□□□□ -0.15
CCDC89-201ENST00000316398 PNMA6EA0A0J9YXQ4 647 aa14.08□□□□□ -0.15
CCDC89-201ENST00000316398 DLL1O00548 723 aa14.08□□□□□ -0.15
CCDC89-201ENST00000316398 MAPK4P31152 587 aa14.08□□□□□ -0.15
CCDC89-201ENST00000316398 Q3C1V9 767 aa14.08□□□□□ -0.15
CCDC89-201ENST00000316398 NAA16Q6N069 864 aaPredicted RBP14.08□□□□□ -0.15
CCDC89-201ENST00000316398 TRIB2Q92519 343 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms