RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 WISP1O95388 367 aa5.83□□□□□ -1.48
SMCO3-201ENST00000316048 GRK4P32298 578 aa5.83□□□□□ -1.48
SMCO3-201ENST00000316048 FXNQ16595 210 aa5.83□□□□□ -1.48
SMCO3-201ENST00000316048 KIF4BQ2VIQ3 1234 aa5.83□□□□□ -1.48
SMCO3-201ENST00000316048 PPM1JQ5JR12 505 aa5.83□□□□□ -1.48
SMCO3-201ENST00000316048 HDXQ7Z353 690 aa5.83□□□□□ -1.48
SMCO3-201ENST00000316048 ATG4CQ96DT6 458 aa5.83□□□□□ -1.48
SMCO3-201ENST00000316048 BTBD6Q96KE9 485 aa5.83□□□□□ -1.48
SMCO3-201ENST00000316048 CHURC1-FNTBB4DL54 471 aa5.83□□□□□ -1.48
SMCO3-201ENST00000316048 DLL1O00548 723 aa5.83□□□□□ -1.48
SMCO3-201ENST00000316048 TERTO14746 1132 aaKnown RBP5.83□□□□□ -1.48
SMCO3-201ENST00000316048 NCLP19338 710 aaKnown RBP5.83□□□□□ -1.48
SMCO3-201ENST00000316048 CDK11BP21127 795 aaKnown RBP5.83□□□□□ -1.48
SMCO3-201ENST00000316048 SQSTM1Q13501 440 aa5.83□□□□□ -1.48
SMCO3-201ENST00000316048 RASGRF1Q13972 1273 aa5.83□□□□□ -1.48
SMCO3-201ENST00000316048 ZC3H12AQ5D1E8 599 aaKnown RBP5.83□□□□□ -1.48
SMCO3-201ENST00000316048 ILDR2Q71H61 639 aa5.83□□□□□ -1.48
SMCO3-201ENST00000316048 ZSCAN1Q8NBB4 408 aa5.83□□□□□ -1.48
SMCO3-201ENST00000316048 SLC9A7Q96T83 725 aa5.83□□□□□ -1.48
SMCO3-201ENST00000316048 GMIPQ9P107 970 aa5.83□□□□□ -1.48
SMCO3-201ENST00000316048 HIF3AQ9Y2N7 669 aa5.83□□□□□ -1.48
SMCO3-201ENST00000316048 OIP5O43482 229 aa5.82□□□□□ -1.48
SMCO3-201ENST00000316048 AOC2O75106 756 aa5.82□□□□□ -1.48
SMCO3-201ENST00000316048 AMPD1P23109 780 aa5.82□□□□□ -1.48
SMCO3-201ENST00000316048 CHMP4BP1P59074 171 aa5.82□□□□□ -1.48
SMCO3-201ENST00000316048 IFRD2Q12894 506 aaPredicted RBP5.82□□□□□ -1.48
SMCO3-201ENST00000316048 SUZ12Q15022 739 aaKnown RBP5.82□□□□□ -1.48
SMCO3-201ENST00000316048 MTERF2Q49AM1 385 aa5.82□□□□□ -1.48
SMCO3-201ENST00000316048 ARSHQ5FYA8 562 aa5.82□□□□□ -1.48
SMCO3-201ENST00000316048 UNC5AQ6ZN44 842 aa5.82□□□□□ -1.48
SMCO3-201ENST00000316048 NLRC3Q7RTR2 1065 aa5.82□□□□□ -1.48
SMCO3-201ENST00000316048 UBE3DQ7Z6J8 389 aa5.82□□□□□ -1.48
SMCO3-201ENST00000316048 NPAS3Q8IXF0 933 aa5.82□□□□□ -1.48
SMCO3-201ENST00000316048 FAM178BQ8IXR5 827 aa5.82□□□□□ -1.48
SMCO3-201ENST00000316048 ACSF2Q96CM8 615 aaPredicted RBP5.82□□□□□ -1.48
SMCO3-201ENST00000316048 TM9SF2Q99805 663 aa5.82□□□□□ -1.48
SMCO3-201ENST00000316048 PPP1R9AQ9ULJ8 1098 aa5.82□□□□□ -1.48
SMCO3-201ENST00000316048 SNCAIPQ9Y6H5 919 aa5.82□□□□□ -1.48
SMCO3-201ENST00000316048 RBAK-RBAKDNI3L0D1 243 aa5.81□□□□□ -1.48
SMCO3-201ENST00000316048 PGRP06401 933 aa5.81□□□□□ -1.48
SMCO3-201ENST00000316048 NME1P15531 152 aaKnown RBP5.81□□□□□ -1.48
SMCO3-201ENST00000316048 HOXB4P17483 251 aaPredicted RBP5.81□□□□□ -1.48
SMCO3-201ENST00000316048 NTF4P34130 210 aa5.81□□□□□ -1.48
SMCO3-201ENST00000316048 TKFCQ3LXA3 575 aa5.81□□□□□ -1.48
SMCO3-201ENST00000316048 DIEXFQ68CQ4 756 aaKnown RBP5.81□□□□□ -1.48
SMCO3-201ENST00000316048 LRP10Q7Z4F1 713 aa5.81□□□□□ -1.48
SMCO3-201ENST00000316048 C19orf47Q8N9M1 422 aaKnown RBP5.81□□□□□ -1.48
SMCO3-201ENST00000316048 KLHL23Q8NBE8 558 aa5.81□□□□□ -1.48
SMCO3-201ENST00000316048 WHAMMQ8TF30 809 aa5.81□□□□□ -1.48
SMCO3-201ENST00000316048 DPH2Q9BQC3 489 aaPredicted RBP5.81□□□□□ -1.48
SMCO3-201ENST00000316048 FAM86C1Q9NVL1 165 aa5.81□□□□□ -1.48
SMCO3-201ENST00000316048 CDC45O75419 566 aa5.81□□□□□ -1.48
SMCO3-201ENST00000316048 CD68P34810 354 aaPredicted RBP5.81□□□□□ -1.48
SMCO3-201ENST00000316048 ETF1P62495 437 aaKnown RBP5.81□□□□□ -1.48
SMCO3-201ENST00000316048 RING1Q06587 406 aa5.81□□□□□ -1.48
SMCO3-201ENST00000316048 LYPD4Q6UWN0 246 aa5.81□□□□□ -1.48
SMCO3-201ENST00000316048 FBRSQ9HAH7 460 aa5.81□□□□□ -1.48
SMCO3-201ENST00000316048 TMPRSS2O15393 492 aa5.8□□□□□ -1.48
SMCO3-201ENST00000316048 AKAP4Q5JQC9 854 aa5.8□□□□□ -1.48
SMCO3-201ENST00000316048 KLHL6Q8WZ60 621 aa5.8□□□□□ -1.48
SMCO3-201ENST00000316048 DGKGP49619 791 aa5.8□□□□□ -1.48
SMCO3-201ENST00000316048 NKG7Q16617 165 aa5.8□□□□□ -1.48
SMCO3-201ENST00000316048 VHLLQ6RSH7 139 aa5.8□□□□□ -1.48
SMCO3-201ENST00000316048 CNNM2Q9H8M5 875 aa5.8□□□□□ -1.48
SMCO3-201ENST00000316048 TJP2Q9UDY2 1190 aa5.8□□□□□ -1.48
SMCO3-201ENST00000316048 KDM2BQ8NHM5 1336 aa5.79□□□□□ -1.48
SMCO3-201ENST00000316048 LRRFIP1Q32MZ4 808 aaKnown RBP5.79□□□□□ -1.48
SMCO3-201ENST00000316048 PLEKHG4Q58EX7 1191 aa5.79□□□□□ -1.48
SMCO3-201ENST00000316048 TMEM201Q5SNT2 666 aa5.79□□□□□ -1.48
SMCO3-201ENST00000316048 ZBTB37Q5TC79 503 aa5.79□□□□□ -1.48
SMCO3-201ENST00000316048 ANKRD13AQ8IZ07 590 aa5.79□□□□□ -1.48
SMCO3-201ENST00000316048 PRDM6Q9NQX0 595 aa5.79□□□□□ -1.48
SMCO3-201ENST00000316048 ZMYM5Q9UJ78 669 aa5.79□□□□□ -1.48
SMCO3-201ENST00000316048 PTCH2Q9Y6C5 1203 aa5.79□□□□□ -1.48
SMCO3-201ENST00000316048 FAM229AH3BQW9 127 aa5.78□□□□□ -1.48
SMCO3-201ENST00000316048 TNFRSF10CO14798 259 aa5.78□□□□□ -1.48
SMCO3-201ENST00000316048 NEFMP07197 916 aa5.78□□□□□ -1.48
SMCO3-201ENST00000316048 CELA2BP08218 269 aaPredicted RBP5.78□□□□□ -1.48
SMCO3-201ENST00000316048 SLURP2P0DP57 97 aa5.78□□□□□ -1.48
SMCO3-201ENST00000316048 BCRP11274 1271 aa5.78□□□□□ -1.48
SMCO3-201ENST00000316048 PDE4BQ07343 736 aa5.78□□□□□ -1.48
SMCO3-201ENST00000316048 C2orf27AQ580R0 203 aa5.78□□□□□ -1.48
SMCO3-201ENST00000316048 CDCP2Q5VXM1 449 aa5.78□□□□□ -1.48
SMCO3-201ENST00000316048 TDRD10Q5VZ19 366 aaKnown RBP5.78□□□□□ -1.48
SMCO3-201ENST00000316048 WNT10AQ9GZT5 417 aa5.78□□□□□ -1.48
SMCO3-201ENST00000316048 TMEM260Q9NX78 707 aa5.78□□□□□ -1.48
SMCO3-201ENST00000316048 AP4E1Q9UPM8 1137 aa5.78□□□□□ -1.48
SMCO3-201ENST00000316048 HCLS1P14317 486 aaPredicted RBP5.78□□□□□ -1.48
SMCO3-201ENST00000316048 DRD2P14416 443 aa5.78□□□□□ -1.48
SMCO3-201ENST00000316048 ID3Q02535 119 aa5.78□□□□□ -1.48
SMCO3-201ENST00000316048 SSRP1Q08945 709 aaKnown RBP5.78□□□□□ -1.48
SMCO3-201ENST00000316048 KIAA1211LQ6NV74 962 aa5.78□□□□□ -1.48
SMCO3-201ENST00000316048 FILIP1Q7Z7B0 1213 aa5.78□□□□□ -1.48
SMCO3-201ENST00000316048 PPFIBP1Q86W92 1011 aa5.78□□□□□ -1.48
SMCO3-201ENST00000316048 TAB3Q8N5C8 712 aaPredicted RBP5.78□□□□□ -1.48
SMCO3-201ENST00000316048 FAM13CQ8NE31 585 aa5.78□□□□□ -1.48
SMCO3-201ENST00000316048 IRF7Q92985 503 aa5.78□□□□□ -1.48
SMCO3-201ENST00000316048 FANCD2OSQ96PS1 177 aa5.78□□□□□ -1.48
SMCO3-201ENST00000316048 PICK1Q9NRD5 415 aa5.78□□□□□ -1.48
SMCO3-201ENST00000316048 DISC1Q9NRI5 854 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms