RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 LAMB1P07942 1786 aa21.36■■□□□ 1.01
CCDC43-201ENST00000315286 STK36Q9NRP7 1315 aa21.36■■□□□ 1.01
CCDC43-201ENST00000315286 C6orf229H3BNL8 230 aa21.35■■□□□ 1.01
CCDC43-201ENST00000315286 PPEF1O14829 653 aaPredicted RBP21.35■■□□□ 1.01
CCDC43-201ENST00000315286 RCAN1P53805 252 aa21.35■■□□□ 1.01
CCDC43-201ENST00000315286 MYSM1Q5VVJ2 828 aa21.35■■□□□ 1.01
CCDC43-201ENST00000315286 SP8Q8IXZ3 490 aa21.35■■□□□ 1.01
CCDC43-201ENST00000315286 SH3RF3Q8TEJ3 882 aaPredicted RBP21.35■■□□□ 1.01
CCDC43-201ENST00000315286 DDX19AQ9NUU7 478 aaKnown RBP21.35■■□□□ 1.01
CCDC43-201ENST00000315286 MCM9Q9NXL9 1143 aa21.35■■□□□ 1.01
CCDC43-201ENST00000315286 ORC4O43929 436 aa21.35■■□□□ 1.01
CCDC43-201ENST00000315286 CMTR1Q8N1G2 835 aaKnown RBP21.35■■□□□ 1.01
CCDC43-201ENST00000315286 MKRN1Q9UHC7 482 aaKnown RBP21.35■■□□□ 1.01
CCDC43-201ENST00000315286 CLIC4Q9Y696 253 aa21.35■■□□□ 1.01
CCDC43-201ENST00000315286 NRXN2Q9P2S2 1712 aa21.35■■□□□ 1.01
CCDC43-201ENST00000315286 LRRC37AA6NMS7 1700 aa21.34■■□□□ 1.01
CCDC43-201ENST00000315286 USP17L8P0C7I0 530 aa21.34■■□□□ 1.01
CCDC43-201ENST00000315286 SRGNP10124 158 aa21.34■■□□□ 1.01
CCDC43-201ENST00000315286 TMC4Q7Z404 712 aa21.34■■□□□ 1.01
CCDC43-201ENST00000315286 NBPF11Q86T75 865 aa21.34■■□□□ 1.01
CCDC43-201ENST00000315286 IQCA1Q86XH1 822 aa21.34■■□□□ 1.01
CCDC43-201ENST00000315286 CCDC82Q8N4S0 544 aa21.34■■□□□ 1.01
CCDC43-201ENST00000315286 FLAD1Q8NFF5 587 aa21.34■■□□□ 1.01
CCDC43-201ENST00000315286 LTBP1Q14766 1721 aa21.34■■□□□ 1.01
CCDC43-201ENST00000315286 CCDC196A0A1B0GTZ2 297 aa21.33■■□□□ 1.01
CCDC43-201ENST00000315286 GUCY1A2P33402 732 aa21.33■■□□□ 1.01
CCDC43-201ENST00000315286 PPP4CP60510 307 aa21.33■■□□□ 1.01
CCDC43-201ENST00000315286 MAP3K11Q16584 847 aa21.33■■□□□ 1.01
CCDC43-201ENST00000315286 TNMDQ9H2S6 317 aa21.33■■□□□ 1.01
CCDC43-201ENST00000315286 CLSTN2Q9H4D0 955 aa21.33■■□□□ 1.01
CCDC43-201ENST00000315286 ATP6V0A2Q9Y487 856 aa21.33■■□□□ 1.01
CCDC43-201ENST00000315286 BAG3O95817 575 aa21.33■■□□□ 1
CCDC43-201ENST00000315286 LDHCP07864 332 aa21.33■■□□□ 1
CCDC43-201ENST00000315286 SLC3A2P08195 630 aaKnown RBP21.33■■□□□ 1
CCDC43-201ENST00000315286 MMP10P09238 476 aa21.33■■□□□ 1
CCDC43-201ENST00000315286 USP5P45974 858 aa21.33■■□□□ 1
CCDC43-201ENST00000315286 ME1P48163 572 aa21.33■■□□□ 1
CCDC43-201ENST00000315286 SLC4A8Q2Y0W8 1093 aa21.33■■□□□ 1
CCDC43-201ENST00000315286 IFIT1BQ5T764 474 aaKnown RBP21.33■■□□□ 1
CCDC43-201ENST00000315286 CCAR1Q8IX12 1150 aaKnown RBP21.33■■□□□ 1
CCDC43-201ENST00000315286 CRACR2BQ8N4Y2 399 aaPredicted RBP21.33■■□□□ 1
CCDC43-201ENST00000315286 LINC00301Q8NCQ3 95 aa21.33■■□□□ 1
CCDC43-201ENST00000315286 TRIM29Q14134 588 aa21.32■■□□□ 1
CCDC43-201ENST00000315286 FAM47AQ5JRC9 791 aa21.32■■□□□ 1
CCDC43-201ENST00000315286 POLR3EQ9NVU0 708 aa21.32■■□□□ 1
CCDC43-201ENST00000315286 MROH7-TTC4A0A0A0MT08 1334 aa21.32■■□□□ 1
CCDC43-201ENST00000315286 TRIM22Q8IYM9 498 aa21.32■■□□□ 1
CCDC43-201ENST00000315286 WASF1Q92558 559 aa21.32■■□□□ 1
CCDC43-201ENST00000315286 TRIM44Q96DX7 344 aaPredicted RBP21.32■■□□□ 1
CCDC43-201ENST00000315286 PDLIM2Q96JY6 352 aa21.32■■□□□ 1
CCDC43-201ENST00000315286 RTFDC1Q9BY42 306 aaPredicted RBP21.32■■□□□ 1
CCDC43-201ENST00000315286 GOLPH3LQ9H4A5 285 aa21.32■■□□□ 1
CCDC43-201ENST00000315286 PCDHA7Q9UN72 937 aa21.32■■□□□ 1
CCDC43-201ENST00000315286 DLEC1Q9Y238 1755 aa21.31■■□□□ 1
CCDC43-201ENST00000315286 NMT2O60551 498 aa21.31■■□□□ 1
CCDC43-201ENST00000315286 NPR1P16066 1061 aa21.31■■□□□ 1
CCDC43-201ENST00000315286 PDE4BQ07343 736 aa21.31■■□□□ 1
CCDC43-201ENST00000315286 C12orf60Q5U649 245 aa21.31■■□□□ 1
CCDC43-201ENST00000315286 CKAP2LQ8IYA6 745 aa21.31■■□□□ 1
CCDC43-201ENST00000315286 NOL10Q9BSC4 688 aaKnown RBP21.31■■□□□ 1
CCDC43-201ENST00000315286 PARP3Q9Y6F1 533 aa21.31■■□□□ 1
CCDC43-201ENST00000315286 YEATS4O95619 227 aa21.3■■□□□ 1
CCDC43-201ENST00000315286 CCDC192P0DO97 292 aa21.3■■□□□ 1
CCDC43-201ENST00000315286 STK38Q15208 465 aa21.3■■□□□ 1
CCDC43-201ENST00000315286 MFSD14BQ5SR56 506 aa21.3■■□□□ 1
CCDC43-201ENST00000315286 MSL1Q68DK7 614 aa21.3■■□□□ 1
CCDC43-201ENST00000315286 OLFM4Q6UX06 510 aa21.3■■□□□ 1
CCDC43-201ENST00000315286 RBM43Q6ZSC3 357 aaKnown RBP21.3■■□□□ 1
CCDC43-201ENST00000315286 CATIPQ7Z7H3 387 aa21.3■■□□□ 1
CCDC43-201ENST00000315286 FAM43AQ8N2R8 423 aa21.3■■□□□ 1
CCDC43-201ENST00000315286 TGFBRAP1Q8WUH2 860 aa21.3■■□□□ 1
CCDC43-201ENST00000315286 RIMBP2O15034 1052 aa21.3■■□□□ 1
CCDC43-201ENST00000315286 PPP2R5BQ15173 497 aa21.3■■□□□ 1
CCDC43-201ENST00000315286 U2AF2P26368 475 aaKnown RBP eCLIP21.29■■□□□ 1
CCDC43-201ENST00000315286 PDE6BP35913 854 aa21.29■■□□□ 1
CCDC43-201ENST00000315286 TROAPQ12815 778 aa21.29■■□□□ 1
CCDC43-201ENST00000315286 UVSSAQ2YD98 709 aa21.29■■□□□ 1
CCDC43-201ENST00000315286 ANO1Q5XXA6 986 aa21.29■■□□□ 1
CCDC43-201ENST00000315286 MYH6P13533 1939 aa21.29■■□□□ 1
CCDC43-201ENST00000315286 DEXIO95424 95 aa21.28■■□□□ 1
CCDC43-201ENST00000315286 BTDP43251 543 aa21.28■■□□□ 1
CCDC43-201ENST00000315286 SNW1Q13573 536 aaKnown RBP21.28■■□□□ 1
CCDC43-201ENST00000315286 GNL2Q13823 731 aaKnown RBP21.28■■□□□ 1
CCDC43-201ENST00000315286 SF3A1Q15459 793 aaKnown RBP21.28■■□□□ 1
CCDC43-201ENST00000315286 ADALQ6DHV7 355 aa21.28■■□□□ 1
CCDC43-201ENST00000315286 KCNG4Q8TDN1 519 aa21.28■■□□□ 1
CCDC43-201ENST00000315286 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.28■■□□□ 1
CCDC43-201ENST00000315286 GPR75-ASB3A0A0A6YYF3 556 aa21.28■■□□□ 1
CCDC43-201ENST00000315286 SPTLC2O15270 562 aa21.28■■□□□ 1
CCDC43-201ENST00000315286 ALDH1B1P30837 517 aa21.28■■□□□ 1
CCDC43-201ENST00000315286 FSIP1Q8NA03 581 aa21.28■■□□□ 1
CCDC43-201ENST00000315286 ENGASEQ8NFI3 743 aa21.28■■□□□ 1
CCDC43-201ENST00000315286 TBC1D22AQ8WUA7 517 aa21.28■■□□□ 1
CCDC43-201ENST00000315286 DYNLL2Q96FJ2 89 aa21.28■■□□□ 1
CCDC43-201ENST00000315286 TNS1Q9HBL0 1735 aaKnown RBP21.28■■□□□ 1
CCDC43-201ENST00000315286 CDK5RAP2Q96SN8 1893 aa21.28■■□□□ 1
CCDC43-201ENST00000315286 FAM205AQ6ZU69 1335 aa21.27■■□□□ 1
CCDC43-201ENST00000315286 TSPY2A6NKD2 308 aa21.27■■□□□ 1
CCDC43-201ENST00000315286 GTF2IP78347 998 aa21.27■■□□□ 1
CCDC43-201ENST00000315286 TYRO3Q06418 890 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms