RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 WDHD1O75717 1129 aaPredicted RBP15.47■□□□□ 0.07
SPAST-201ENST00000315285 RPL13P26373 211 aaKnown RBP15.47■□□□□ 0.07
SPAST-201ENST00000315285 DDX17Q92841 729 aaKnown RBP15.47■□□□□ 0.07
SPAST-201ENST00000315285 CDCA7Q9BWT1 371 aaPredicted RBP15.47■□□□□ 0.07
SPAST-201ENST00000315285 CCDC87Q9NVE4 849 aa15.47■□□□□ 0.07
SPAST-201ENST00000315285 ATP2C2O75185 946 aa15.47■□□□□ 0.07
SPAST-201ENST00000315285 KRT9P35527 623 aa15.47■□□□□ 0.07
SPAST-201ENST00000315285 TNNC1P63316 161 aa15.47■□□□□ 0.07
SPAST-201ENST00000315285 CCNT1O60563 726 aaKnown RBP15.46■□□□□ 0.07
SPAST-201ENST00000315285 TAB2Q9NYJ8 693 aa15.46■□□□□ 0.07
SPAST-201ENST00000315285 VPS54Q9P1Q0 977 aa15.46■□□□□ 0.07
SPAST-201ENST00000315285 ADCY9O60503 1353 aa15.46■□□□□ 0.07
SPAST-201ENST00000315285 hCG_1642624A0A1W2PR95 340 aa15.46■□□□□ 0.07
SPAST-201ENST00000315285 ACTN2P35609 894 aa15.46■□□□□ 0.07
SPAST-201ENST00000315285 GPCPD1Q9NPB8 672 aa15.46■□□□□ 0.07
SPAST-201ENST00000315285 KIF1BO60333 1816 aa15.46■□□□□ 0.07
SPAST-201ENST00000315285 DCAF17Q5H9S7 520 aaPredicted RBP15.46■□□□□ 0.07
SPAST-201ENST00000315285 DBNLQ9UJU6 430 aaKnown RBP15.46■□□□□ 0.07
SPAST-201ENST00000315285 TXKP42681 527 aa15.46■□□□□ 0.06
SPAST-201ENST00000315285 LRMPQ12912 555 aa15.46■□□□□ 0.06
SPAST-201ENST00000315285 RAPGEF1Q13905 1077 aa15.46■□□□□ 0.06
SPAST-201ENST00000315285 SERTAD1Q9UHV2 236 aa15.46■□□□□ 0.06
SPAST-201ENST00000315285 EBAG9O00559 213 aa15.45■□□□□ 0.06
SPAST-201ENST00000315285 TOM1O60784 492 aa15.45■□□□□ 0.06
SPAST-201ENST00000315285 ADD1P35611 737 aaKnown RBP15.45■□□□□ 0.06
SPAST-201ENST00000315285 CTSWP56202 376 aa15.45■□□□□ 0.06
SPAST-201ENST00000315285 LRRC24Q50LG9 513 aa15.45■□□□□ 0.06
SPAST-201ENST00000315285 ZNF654Q8IZM8 581 aa15.45■□□□□ 0.06
SPAST-201ENST00000315285 CNBD1Q8NA66 436 aa15.45■□□□□ 0.06
SPAST-201ENST00000315285 DDX12PQ92771 950 aa15.45■□□□□ 0.06
SPAST-201ENST00000315285 CFAP74Q9C0B2 1584 aa15.45■□□□□ 0.06
SPAST-201ENST00000315285 ERBB4Q15303 1308 aa15.45■□□□□ 0.06
SPAST-201ENST00000315285 STAMQ92783 540 aa15.45■□□□□ 0.06
SPAST-201ENST00000315285 UFL1O94874 794 aa15.45■□□□□ 0.06
SPAST-201ENST00000315285 FGAP02671 866 aa15.45■□□□□ 0.06
SPAST-201ENST00000315285 MNAT1P51948 309 aa15.45■□□□□ 0.06
SPAST-201ENST00000315285 DNAJC21Q5F1R6 531 aaKnown RBP15.45■□□□□ 0.06
SPAST-201ENST00000315285 WDR66Q8TBY9 1149 aa15.45■□□□□ 0.06
SPAST-201ENST00000315285 BCL2L12Q9HB09 334 aa15.45■□□□□ 0.06
SPAST-201ENST00000315285 TLR7Q9NYK1 1049 aaKnown RBP15.45■□□□□ 0.06
SPAST-201ENST00000315285 EFCAB6Q5THR3 1501 aa15.45■□□□□ 0.06
SPAST-201ENST00000315285 NONOQ15233 471 aaKnown RBP eCLIP15.45■□□□□ 0.06
SPAST-201ENST00000315285 NOSTRINQ8IVI9 506 aa15.45■□□□□ 0.06
SPAST-201ENST00000315285 RGS22Q8NE09 1264 aa15.45■□□□□ 0.06
SPAST-201ENST00000315285 PCDHA7Q9UN72 937 aa15.45■□□□□ 0.06
SPAST-201ENST00000315285 CFAP58Q5T655 872 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 ARFGAP2Q8N6H7 521 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 TFCP2L1Q9NZI6 479 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 TMEM110-MUSTN1A8MSY1 372 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 PDE6AP16499 860 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 CMA1P23946 247 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 PPARAQ07869 468 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 SCRN1Q12765 414 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 TTLL12Q14166 644 aaPredicted RBP15.44■□□□□ 0.06
SPAST-201ENST00000315285 JAKMIP2Q96AA8 810 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 NUP58Q9BVL2 599 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 USP6P35125 1406 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 MLH3Q9UHC1 1453 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 A0A1W2PRG0 241 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 FAM76AQ8TAV0 307 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 MRFAP1L1Q96HT8 127 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 CDK12Q9NYV4 1490 aaPredicted RBP15.44■□□□□ 0.06
SPAST-201ENST00000315285 ZEB2O60315 1214 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 PDIA3P30101 505 aaKnown RBP15.44■□□□□ 0.06
SPAST-201ENST00000315285 PTCH1Q13635 1447 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 TRAPPC3LQ5T215 181 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 KRT25Q7Z3Z0 450 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 TSC1Q92574 1164 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 CCDC77Q9BR77 488 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 NSRP1Q9H0G5 558 aaKnown RBP15.44■□□□□ 0.06
SPAST-201ENST00000315285 IKBKGQ9Y6K9 419 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 SHROOM2Q13796 1616 aa15.44■□□□□ 0.06
SPAST-201ENST00000315285 IFNL3Q8IZI9 196 aa15.43■□□□□ 0.06
SPAST-201ENST00000315285 EYA3Q99504 573 aa15.43■□□□□ 0.06
SPAST-201ENST00000315285 ZMYM6O95789 1325 aa15.43■□□□□ 0.06
SPAST-201ENST00000315285 BCORL1Q5H9F3 1711 aa15.43■□□□□ 0.06
SPAST-201ENST00000315285 NELFBQ8WX92 580 aa15.43■□□□□ 0.06
SPAST-201ENST00000315285 LRWD1Q9UFC0 647 aa15.43■□□□□ 0.06
SPAST-201ENST00000315285 EIF6P56537 245 aaKnown RBP15.43■□□□□ 0.06
SPAST-201ENST00000315285 STMN4Q9H169 189 aaPredicted RBP15.43■□□□□ 0.06
SPAST-201ENST00000315285 ARID4AP29374 1257 aaPredicted RBP15.42■□□□□ 0.06
SPAST-201ENST00000315285 SYNCQ9H7C4 482 aa15.42■□□□□ 0.06
SPAST-201ENST00000315285 VEZTQ9HBM0 779 aa15.42■□□□□ 0.06
SPAST-201ENST00000315285 CYP21A2P08686 494 aa15.42■□□□□ 0.06
SPAST-201ENST00000315285 VWA3BQ502W6 1294 aa15.42■□□□□ 0.06
SPAST-201ENST00000315285 ZBTB38Q8NAP3 1195 aaPredicted RBP15.42■□□□□ 0.06
SPAST-201ENST00000315285 RBM17Q96I25 401 aaKnown RBP15.42■□□□□ 0.06
SPAST-201ENST00000315285 BLZF1Q9H2G9 400 aa15.42■□□□□ 0.06
SPAST-201ENST00000315285 PCCAP05165 728 aaPredicted RBP15.42■□□□□ 0.06
SPAST-201ENST00000315285 PLS1Q14651 629 aa15.42■□□□□ 0.06
SPAST-201ENST00000315285 FBXO18Q8NFZ0 1043 aa15.42■□□□□ 0.06
SPAST-201ENST00000315285 IMPG2Q9BZV3 1241 aa15.42■□□□□ 0.06
SPAST-201ENST00000315285 EPB41P11171 864 aaKnown RBP15.42■□□□□ 0.06
SPAST-201ENST00000315285 ADKP55263 362 aaKnown RBP15.42■□□□□ 0.06
SPAST-201ENST00000315285 GRIPAP1Q4V328 841 aa15.42■□□□□ 0.06
SPAST-201ENST00000315285 CERS3Q8IU89 383 aa15.42■□□□□ 0.06
SPAST-201ENST00000315285 FMNL3Q8IVF7 1028 aa15.42■□□□□ 0.06
SPAST-201ENST00000315285 PRR36Q9H6K5 1346 aa15.42■□□□□ 0.06
SPAST-201ENST00000315285 KIF4AO95239 1232 aa15.41■□□□□ 0.06
SPAST-201ENST00000315285 TFAP4Q01664 338 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms