RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 SREK1Q8WXA9 508 aaKnown RBP10.46□□□□□ -0.74
BDNF-201ENST00000314915 DHTKD1Q96HY7 919 aaPredicted RBP10.46□□□□□ -0.74
BDNF-201ENST00000314915 OSBPL10Q9BXB5 764 aa10.46□□□□□ -0.74
BDNF-201ENST00000314915 VCX3BQ9H321 246 aa10.46□□□□□ -0.74
BDNF-201ENST00000314915 VCX3AQ9NNX9 186 aa10.46□□□□□ -0.74
BDNF-201ENST00000314915 PALM3A6NDB9 673 aaPredicted RBP10.45□□□□□ -0.74
BDNF-201ENST00000314915 LRRIQ3A6PVS8 624 aaPredicted RBP10.45□□□□□ -0.74
BDNF-201ENST00000314915 SYF2O95926 243 aaKnown RBP10.45□□□□□ -0.74
BDNF-201ENST00000314915 GNAI3P08754 354 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 SMARCA1P28370 1054 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 NEK4P51957 841 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 LRRC49Q8IUZ0 686 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 RPAP2Q8IXW5 612 aaPredicted RBP10.45□□□□□ -0.74
BDNF-201ENST00000314915 ZNF653Q96CK0 615 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 UBE2OQ9C0C9 1292 aaKnown RBP10.45□□□□□ -0.74
BDNF-201ENST00000314915 TTC21BQ7Z4L5 1316 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 SSBP05455 408 aaKnown RBP eCLIP10.45□□□□□ -0.74
BDNF-201ENST00000314915 ACCSLQ4AC99 568 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 MAMSTRQ6ZN01 415 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 RSPH3Q86UC2 560 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 ANKRD13AQ8IZ07 590 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.45□□□□□ -0.74
BDNF-201ENST00000314915 P3H4Q92791 437 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 CCDC141Q6ZP82 1450 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 BIVM-ERCC5R4GMW8 1640 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 RALGAPBQ86X10 1494 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 MBD5Q9P267 1494 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 GOLGA6L10A0A0M3HER8 536 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 WDHD1O75717 1129 aaPredicted RBP10.45□□□□□ -0.74
BDNF-201ENST00000314915 PPP2R1AP30153 589 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 MRPS35P82673 323 aaKnown RBP10.45□□□□□ -0.74
BDNF-201ENST00000314915 MKRN4PQ13434 485 aaPredicted RBP10.45□□□□□ -0.74
BDNF-201ENST00000314915 CCDC152Q4G0S7 254 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 TBC1D10BQ4KMP7 808 aaPredicted RBP10.45□□□□□ -0.74
BDNF-201ENST00000314915 ATF7IPQ6VMQ6 1270 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 CNKSR1Q969H4 720 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 NUP58Q9BVL2 599 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 NOD2Q9HC29 1040 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 C2CD2Q9Y426 696 aa10.45□□□□□ -0.74
BDNF-201ENST00000314915 ANP32DO95626 131 aa10.44□□□□□ -0.74
BDNF-201ENST00000314915 OXCT1P55809 520 aa10.44□□□□□ -0.74
BDNF-201ENST00000314915 SESTD1Q86VW0 696 aa10.44□□□□□ -0.74
BDNF-201ENST00000314915 ANKRD24Q8TF21 1146 aa10.44□□□□□ -0.74
BDNF-201ENST00000314915 PREBQ9HCU5 417 aa10.44□□□□□ -0.74
BDNF-201ENST00000314915 SETD1BQ9UPS6 1966 aaKnown RBP10.44□□□□□ -0.74
BDNF-201ENST00000314915 A0A1B0GVG6 124 aa10.44□□□□□ -0.74
BDNF-201ENST00000314915 LSM1O15116 133 aaKnown RBP10.44□□□□□ -0.74
BDNF-201ENST00000314915 OSBPL1AQ9BXW6 950 aa10.44□□□□□ -0.74
BDNF-201ENST00000314915 RABEP2Q9H5N1 569 aa10.44□□□□□ -0.74
BDNF-201ENST00000314915 DMAP1Q9NPF5 467 aaPredicted RBP10.44□□□□□ -0.74
BDNF-201ENST00000314915 INAQ16352 499 aa10.44□□□□□ -0.74
BDNF-201ENST00000314915 FXNQ16595 210 aa10.44□□□□□ -0.74
BDNF-201ENST00000314915 RBM43Q6ZSC3 357 aaKnown RBP10.44□□□□□ -0.74
BDNF-201ENST00000314915 ITPRIPQ8IWB1 547 aa10.44□□□□□ -0.74
BDNF-201ENST00000314915 ANKZF1Q9H8Y5 726 aa10.44□□□□□ -0.74
BDNF-201ENST00000314915 NPHP3Q7Z494 1330 aa10.44□□□□□ -0.74
BDNF-201ENST00000314915 CLCN2P51788 898 aa10.44□□□□□ -0.74
BDNF-201ENST00000314915 XRCC4Q13426 336 aa10.44□□□□□ -0.74
BDNF-201ENST00000314915 RIPK1Q13546 671 aa10.44□□□□□ -0.74
BDNF-201ENST00000314915 TSR1Q2NL82 804 aaKnown RBP10.44□□□□□ -0.74
BDNF-201ENST00000314915 CEP128Q6ZU80 1094 aa10.44□□□□□ -0.74
BDNF-201ENST00000314915 DDX27Q96GQ7 796 aaKnown RBP10.44□□□□□ -0.74
BDNF-201ENST00000314915 OXCT2Q9BYC2 517 aaPredicted RBP10.44□□□□□ -0.74
BDNF-201ENST00000314915 ZNF148Q9UQR1 794 aa10.44□□□□□ -0.74
BDNF-201ENST00000314915 ATP6V0A2Q9Y487 856 aa10.44□□□□□ -0.74
BDNF-201ENST00000314915 KDM5DQ9BY66 1539 aa10.43□□□□□ -0.74
BDNF-201ENST00000314915 NUTM2FA1L443 756 aa10.43□□□□□ -0.74
BDNF-201ENST00000314915 ATP6V1G2O95670 118 aa10.43□□□□□ -0.74
BDNF-201ENST00000314915 LBRQ14739 615 aaKnown RBP10.43□□□□□ -0.74
BDNF-201ENST00000314915 RSPH1Q8WYR4 309 aa10.43□□□□□ -0.74
BDNF-201ENST00000314915 SH3GLB1Q9Y371 365 aa10.43□□□□□ -0.74
BDNF-201ENST00000314915 PPIP5K1Q6PFW1 1433 aa10.43□□□□□ -0.74
BDNF-201ENST00000314915 GPR75-ASB3A0A0A6YYF3 556 aa10.43□□□□□ -0.74
BDNF-201ENST00000314915 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.43□□□□□ -0.74
BDNF-201ENST00000314915 SH3BP5O60239 455 aa10.43□□□□□ -0.74
BDNF-201ENST00000314915 MAP7Q14244 749 aa10.43□□□□□ -0.74
BDNF-201ENST00000314915 NUTM2DQ5VT03 806 aaPredicted RBP10.43□□□□□ -0.74
BDNF-201ENST00000314915 SYTL4Q96C24 671 aaPredicted RBP10.43□□□□□ -0.74
BDNF-201ENST00000314915 ZCWPW1Q9H0M4 648 aa10.43□□□□□ -0.74
BDNF-201ENST00000314915 PCMTD2Q9NV79 361 aa10.43□□□□□ -0.74
BDNF-201ENST00000314915 SUGT1Q9Y2Z0 365 aa10.43□□□□□ -0.74
BDNF-201ENST00000314915 ASB3Q9Y575 518 aa10.43□□□□□ -0.74
BDNF-201ENST00000314915 GOLGA8KD6RF30 607 aa10.43□□□□□ -0.74
BDNF-201ENST00000314915 GNG11P61952 73 aa10.43□□□□□ -0.74
BDNF-201ENST00000314915 PDE4BQ07343 736 aa10.43□□□□□ -0.74
BDNF-201ENST00000314915 STIM1Q13586 685 aa10.43□□□□□ -0.74
BDNF-201ENST00000314915 CREB3L3Q68CJ9 461 aa10.43□□□□□ -0.74
BDNF-201ENST00000314915 MSL1Q68DK7 614 aa10.43□□□□□ -0.74
BDNF-201ENST00000314915 LMNTD2Q8IXW0 634 aa10.43□□□□□ -0.74
BDNF-201ENST00000314915 STAMBPL1Q96FJ0 436 aa10.43□□□□□ -0.74
BDNF-201ENST00000314915 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.43□□□□□ -0.74
BDNF-201ENST00000314915 STK24Q9Y6E0 443 aa10.43□□□□□ -0.74
BDNF-201ENST00000314915 PARP10Q53GL7 1025 aa10.42□□□□□ -0.74
BDNF-201ENST00000314915 DNAJC25Q9H1X3 360 aa10.42□□□□□ -0.74
BDNF-201ENST00000314915 BAIAP2L1Q9UHR4 511 aa10.42□□□□□ -0.74
BDNF-201ENST00000314915 GRIN2DO15399 1336 aa10.42□□□□□ -0.74
BDNF-201ENST00000314915 DNAJC8O75937 253 aaPredicted RBP10.42□□□□□ -0.74
BDNF-201ENST00000314915 RC3H1Q5TC82 1133 aaKnown RBP10.42□□□□□ -0.74
BDNF-201ENST00000314915 ZNF280CQ8ND82 737 aa10.42□□□□□ -0.74
BDNF-201ENST00000314915 TRAPPC9Q96Q05 1148 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms