RNA–Protein interactions for RNA: ENST00000313050.11

SEC16A-203, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SEC16A, Length 8,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-203ENST00000313050 SETD1BQ9UPS6 1966 aaKnown RBP11.65□□□□□ -0.54
SEC16A-203ENST00000313050 RAD51AP2Q09MP3 1159 aa11.65□□□□□ -0.54
SEC16A-203ENST00000313050 EXOSC9Q06265 439 aaKnown RBP11.65□□□□□ -0.54
SEC16A-203ENST00000313050 DYDC2Q96IM9 177 aa11.65□□□□□ -0.54
SEC16A-203ENST00000313050 C10orf88Q9H8K7 445 aa11.65□□□□□ -0.54
SEC16A-203ENST00000313050 SLC44A4Q53GD3 710 aa11.65□□□□□ -0.54
SEC16A-203ENST00000313050 SND1Q7KZF4 910 aaKnown RBP eCLIP11.65□□□□□ -0.54
SEC16A-203ENST00000313050 TADA2BQ86TJ2 420 aa11.65□□□□□ -0.54
SEC16A-203ENST00000313050 MPHOSPH6Q99547 160 aaKnown RBP11.65□□□□□ -0.54
SEC16A-203ENST00000313050 STMN3Q9NZ72 180 aa11.65□□□□□ -0.54
SEC16A-203ENST00000313050 SPOPO43791 374 aa11.65□□□□□ -0.54
SEC16A-203ENST00000313050 CHGBP05060 677 aa11.65□□□□□ -0.54
SEC16A-203ENST00000313050 CUL3Q13618 768 aa11.65□□□□□ -0.54
SEC16A-203ENST00000313050 TRIM58Q8NG06 486 aa11.65□□□□□ -0.54
SEC16A-203ENST00000313050 SECISBP2LQ93073 1101 aaKnown RBP11.65□□□□□ -0.54
SEC16A-203ENST00000313050 SH3GL1Q99961 368 aa11.65□□□□□ -0.54
SEC16A-203ENST00000313050 PDE11AQ9HCR9 933 aa11.65□□□□□ -0.54
SEC16A-203ENST00000313050 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.65□□□□□ -0.54
SEC16A-203ENST00000313050 ZNF213O14771 459 aa11.65□□□□□ -0.54
SEC16A-203ENST00000313050 RAB14P61106 215 aa11.65□□□□□ -0.54
SEC16A-203ENST00000313050 TBC1D9Q6ZT07 1266 aa11.65□□□□□ -0.54
SEC16A-203ENST00000313050 KLHL29Q96CT2 875 aa11.65□□□□□ -0.54
SEC16A-203ENST00000313050 ST13P50502 369 aaKnown RBP11.65□□□□□ -0.54
SEC16A-203ENST00000313050 APBA1Q02410 837 aa11.65□□□□□ -0.54
SEC16A-203ENST00000313050 GAS2L2Q8NHY3 880 aa11.65□□□□□ -0.54
SEC16A-203ENST00000313050 ESRRBO95718 433 aa11.65□□□□□ -0.55
SEC16A-203ENST00000313050 HSPA8P11142 646 aaKnown RBP11.65□□□□□ -0.55
SEC16A-203ENST00000313050 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.65□□□□□ -0.55
SEC16A-203ENST00000313050 GDAP1L1Q96MZ0 367 aa11.65□□□□□ -0.55
SEC16A-203ENST00000313050 TMEM191CA6NGB0 347 aa11.64□□□□□ -0.55
SEC16A-203ENST00000313050 ATP8B1O43520 1251 aa11.64□□□□□ -0.55
SEC16A-203ENST00000313050 PDHA1P08559 390 aa11.64□□□□□ -0.55
SEC16A-203ENST00000313050 TMEM191BP0C7N4 346 aa11.64□□□□□ -0.55
SEC16A-203ENST00000313050 PACSIN2Q9UNF0 486 aaPredicted RBP11.64□□□□□ -0.55
SEC16A-203ENST00000313050 SYCE1LA8MT33 242 aa11.64□□□□□ -0.55
SEC16A-203ENST00000313050 H0YC42 278 aa11.64□□□□□ -0.55
SEC16A-203ENST00000313050 CAPN1P07384 714 aa11.64□□□□□ -0.55
SEC16A-203ENST00000313050 LRRC8CQ8TDW0 803 aa11.64□□□□□ -0.55
SEC16A-203ENST00000313050 HMGB3O15347 200 aaKnown RBP11.64□□□□□ -0.55
SEC16A-203ENST00000313050 ARHGAP6O43182 974 aa11.64□□□□□ -0.55
SEC16A-203ENST00000313050 TRAF1Q13077 416 aa11.64□□□□□ -0.55
SEC16A-203ENST00000313050 ZC3H15Q8WU90 426 aaKnown RBP11.64□□□□□ -0.55
SEC16A-203ENST00000313050 STX1BP61266 288 aa11.64□□□□□ -0.55
SEC16A-203ENST00000313050 IGSF22Q8N9C0 903 aa11.64□□□□□ -0.55
SEC16A-203ENST00000313050 IARSP41252 1262 aaKnown RBP11.64□□□□□ -0.55
SEC16A-203ENST00000313050 TBC1D23Q9NUY8 699 aa11.64□□□□□ -0.55
SEC16A-203ENST00000313050 GNGT2O14610 69 aa11.63□□□□□ -0.55
SEC16A-203ENST00000313050 KRT12Q99456 494 aa11.63□□□□□ -0.55
SEC16A-203ENST00000313050 TRIM31Q9BZY9 425 aa11.63□□□□□ -0.55
SEC16A-203ENST00000313050 CXorf56Q9H5V9 222 aa11.63□□□□□ -0.55
SEC16A-203ENST00000313050 VPS37BQ9H9H4 285 aa11.63□□□□□ -0.55
SEC16A-203ENST00000313050 SAR1BQ9Y6B6 198 aa11.63□□□□□ -0.55
SEC16A-203ENST00000313050 SLC4A7Q9Y6M7 1214 aa11.63□□□□□ -0.55
SEC16A-203ENST00000313050 METAP2P50579 478 aaKnown RBP eCLIP11.63□□□□□ -0.556e-6■■■□□ 17.4
SEC16A-203ENST00000313050 GOLGA8FQ08AF8 430 aa11.63□□□□□ -0.55
SEC16A-203ENST00000313050 GOLGA8DPQ0D2H9 430 aa11.63□□□□□ -0.55
SEC16A-203ENST00000313050 BMP2KLQ5H9B9 411 aa11.63□□□□□ -0.55
SEC16A-203ENST00000313050 PYGLP06737 847 aa11.63□□□□□ -0.55
SEC16A-203ENST00000313050 PPARDQ03181 441 aa11.63□□□□□ -0.55
SEC16A-203ENST00000313050 HDDC2Q7Z4H3 204 aa11.63□□□□□ -0.55
SEC16A-203ENST00000313050 ANKRD42Q8N9B4 389 aa11.63□□□□□ -0.55
SEC16A-203ENST00000313050 ZCRB1Q8TBF4 217 aaKnown RBP11.63□□□□□ -0.55
SEC16A-203ENST00000313050 SNX21Q969T3 373 aa11.63□□□□□ -0.55
SEC16A-203ENST00000313050 ZNF500O60304 480 aaPredicted RBP11.63□□□□□ -0.55
SEC16A-203ENST00000313050 SNX1Q13596 522 aa11.63□□□□□ -0.55
SEC16A-203ENST00000313050 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.63□□□□□ -0.559e-10■■■■■ 79.8
SEC16A-203ENST00000313050 MKNK2Q9HBH9 465 aa11.63□□□□□ -0.55
SEC16A-203ENST00000313050 FAM13AO94988 1023 aa11.63□□□□□ -0.55
SEC16A-203ENST00000313050 SNX29Q8TEQ0 813 aa11.63□□□□□ -0.55
SEC16A-203ENST00000313050 SERPINI1Q99574 410 aa11.63□□□□□ -0.55
SEC16A-203ENST00000313050 HAUS2Q9NVX0 235 aa11.63□□□□□ -0.55
SEC16A-203ENST00000313050 RNASE9P60153 205 aaKnown RBP11.62□□□□□ -0.55
SEC16A-203ENST00000313050 IL9RQ01113 521 aa11.62□□□□□ -0.55
SEC16A-203ENST00000313050 CEP55Q53EZ4 464 aa11.62□□□□□ -0.55
SEC16A-203ENST00000313050 DNAJC17Q9NVM6 304 aaKnown RBP11.62□□□□□ -0.55
SEC16A-203ENST00000313050 MYH11P35749 1972 aa11.62□□□□□ -0.55
SEC16A-203ENST00000313050 NUP58Q9BVL2 599 aa11.62□□□□□ -0.55
SEC16A-203ENST00000313050 TYW1Q9NV66 732 aaKnown RBP11.62□□□□□ -0.55
SEC16A-203ENST00000313050 NBPF26B4DH59 902 aa11.62□□□□□ -0.55
SEC16A-203ENST00000313050 RASGRF2O14827 1237 aa11.62□□□□□ -0.55
SEC16A-203ENST00000313050 NBPF14Q5TI25 921 aa11.62□□□□□ -0.55
SEC16A-203ENST00000313050 CCDC82Q8N4S0 544 aa11.62□□□□□ -0.55
SEC16A-203ENST00000313050 NBPF15Q8N660 670 aa11.62□□□□□ -0.55
SEC16A-203ENST00000313050 RFWD2Q8NHY2 731 aa11.62□□□□□ -0.55
SEC16A-203ENST00000313050 TLK1Q9UKI8 766 aa11.62□□□□□ -0.55
SEC16A-203ENST00000313050 IDH1O75874 414 aaKnown RBP11.62□□□□□ -0.55
SEC16A-203ENST00000313050 IFIT3O14879 490 aaKnown RBP11.62□□□□□ -0.55
SEC16A-203ENST00000313050 MYL5Q02045 173 aa11.62□□□□□ -0.55
SEC16A-203ENST00000313050 MUM1L1Q5H9M0 696 aa11.62□□□□□ -0.55
SEC16A-203ENST00000313050 MCM10Q7L590 875 aa11.62□□□□□ -0.55
SEC16A-203ENST00000313050 ZNF653Q96CK0 615 aa11.62□□□□□ -0.55
SEC16A-203ENST00000313050 FGFR1OP2Q9NVK5 253 aa11.62□□□□□ -0.55
SEC16A-203ENST00000313050 CCT6AP40227 531 aaKnown RBP11.62□□□□□ -0.55
SEC16A-203ENST00000313050 CASC4Q6P4E1 433 aa11.62□□□□□ -0.55
SEC16A-203ENST00000313050 UBE3BQ7Z3V4 1068 aa11.62□□□□□ -0.55
SEC16A-203ENST00000313050 CCDC105Q8IYK2 499 aa11.62□□□□□ -0.55
SEC16A-203ENST00000313050 TTLL11Q8NHH1 800 aa11.62□□□□□ -0.55
SEC16A-203ENST00000313050 ZMYND8Q9ULU4 1186 aaPredicted RBP11.62□□□□□ -0.55
SEC16A-203ENST00000313050 CAPN11Q9UMQ6 739 aa11.62□□□□□ -0.55
SEC16A-203ENST00000313050 GUCY2FP51841 1108 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms