RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 ZPR1O75312 459 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 ATP2B3Q16720 1220 aa9.88□□□□□ -0.83
COL6A5-202ENST00000312481 SYNRGQ9UMZ2 1314 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 KIDINS220Q9ULH0 1771 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 SLC9C1Q4G0N8 1177 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 TDRD12Q587J7 1177 aaKnown RBP9.87□□□□□ -0.83
COL6A5-202ENST00000312481 TDRD7Q8NHU6 1098 aaKnown RBP9.87□□□□□ -0.83
COL6A5-202ENST00000312481 WWC3Q9ULE0 1092 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 ACEP12821 1306 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 LGSNQ5TDP6 509 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 SEC62Q99442 399 aaKnown RBP9.87□□□□□ -0.83
COL6A5-202ENST00000312481 SPZ1Q9BXG8 430 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 LMBRD1Q9NUN5 540 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 FAM208AQ9UK61 1670 aaKnown RBP9.87□□□□□ -0.83
COL6A5-202ENST00000312481 EVCP57679 992 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 BRF1Q92994 677 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 EFCC1Q9HA90 598 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 PRPF6O94906 941 aaKnown RBP9.87□□□□□ -0.83
COL6A5-202ENST00000312481 AK2P54819 239 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 CCDC186Q7Z3E2 898 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 SLIT1O75093 1534 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 DNM2P50570 870 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 STK3Q13188 491 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 TRPC3Q13507 836 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 CAMK4Q16566 473 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 TEKT1Q969V4 418 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 CIAO1O76071 339 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 IRX3P78415 501 aaPredicted RBP9.87□□□□□ -0.83
COL6A5-202ENST00000312481 ANO1Q5XXA6 986 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 RABGAP1Q9Y3P9 1069 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 H7C1D1 291 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 RRS1Q15050 365 aaKnown RBP9.87□□□□□ -0.83
COL6A5-202ENST00000312481 ELOA2Q8IYF1 753 aaPredicted RBP9.87□□□□□ -0.83
COL6A5-202ENST00000312481 CCDC170Q8IYT3 715 aa9.87□□□□□ -0.83
COL6A5-202ENST00000312481 CKAP2LQ8IYA6 745 aa9.86□□□□□ -0.83
COL6A5-202ENST00000312481 NKIRAS1Q9NYS0 192 aa9.86□□□□□ -0.83
COL6A5-202ENST00000312481 FYB2Q5VWT5 728 aa9.86□□□□□ -0.83
COL6A5-202ENST00000312481 ADGRB2O60241 1585 aa9.86□□□□□ -0.83
COL6A5-202ENST00000312481 EIF3BP55884 814 aaKnown RBP9.86□□□□□ -0.83
COL6A5-202ENST00000312481 STK11IPQ8N1F8 1099 aa9.86□□□□□ -0.83
COL6A5-202ENST00000312481 NUTM2BA6NNL0 878 aaPredicted RBP9.86□□□□□ -0.83
COL6A5-202ENST00000312481 NUTM2EB1AL46 878 aaPredicted RBP9.86□□□□□ -0.83
COL6A5-202ENST00000312481 ZMYND15Q9H091 742 aa9.86□□□□□ -0.83
COL6A5-202ENST00000312481 IL1RAPL2Q9NP60 686 aa9.86□□□□□ -0.83
COL6A5-202ENST00000312481 SART1O43290 800 aaKnown RBP9.86□□□□□ -0.83
COL6A5-202ENST00000312481 PPFIBP2Q8ND30 876 aa9.86□□□□□ -0.83
COL6A5-202ENST00000312481 GSDMAQ96QA5 445 aa9.86□□□□□ -0.83
COL6A5-202ENST00000312481 ALS2CLQ60I27 953 aa9.86□□□□□ -0.83
COL6A5-202ENST00000312481 MCM10Q7L590 875 aa9.86□□□□□ -0.83
COL6A5-202ENST00000312481 TULP4Q9NRJ4 1543 aa9.86□□□□□ -0.83
COL6A5-202ENST00000312481 METTL22Q9BUU2 404 aaPredicted RBP9.86□□□□□ -0.83
COL6A5-202ENST00000312481 KIAA1468Q9P260 1216 aa9.86□□□□□ -0.83
COL6A5-202ENST00000312481 FRMD4BQ9Y2L6 1034 aa9.86□□□□□ -0.83
COL6A5-202ENST00000312481 SH3TC1Q8TE82 1336 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 GOLGA6CA6NDK9 693 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 GOLGA6DP0CG33 693 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 NBPF6Q5VWK0 638 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 ZNF804AQ7Z570 1209 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 SMC1BQ8NDV3 1235 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 PLBD2Q8NHP8 589 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 NBPF4Q96M43 638 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.85□□□□□ -0.83
COL6A5-202ENST00000312481 GOLGA6AQ9NYA3 693 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 CNPY2Q9Y2B0 182 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 CMA1P23946 247 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 KRT79Q5XKE5 535 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 UBE3BQ7Z3V4 1068 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 TBC1D22AQ8WUA7 517 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 NECTIN2Q92692 538 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 EXOC7Q9UPT5 735 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 MYOM1P52179 1685 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 GOLGA6BA6NDN3 693 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 CDC37Q16543 378 aaPredicted RBP9.85□□□□□ -0.83
COL6A5-202ENST00000312481 Q6ZUG5 572 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 RRP36Q96EU6 259 aaKnown RBP9.85□□□□□ -0.83
COL6A5-202ENST00000312481 DENND2AQ9ULE3 1009 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 FAN1Q9Y2M0 1017 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 MED23Q9ULK4 1368 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 KLF18A0A0U1RQI7 1052 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 CALUO43852 315 aaPredicted RBP9.85□□□□□ -0.83
COL6A5-202ENST00000312481 PPP6R2O75170 966 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 PPP4R3CPQ6ZMV5 832 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 DIS3Q9Y2L1 958 aaKnown RBP9.85□□□□□ -0.83
COL6A5-202ENST00000312481 ETF1P62495 437 aaKnown RBP9.85□□□□□ -0.83
COL6A5-202ENST00000312481 NRXN1Q9ULB1 1477 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 DRP2Q13474 957 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 KRT25Q7Z3Z0 450 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 ZSWIM6Q9HCJ5 1215 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 KCNH3Q9ULD8 1083 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 BCRP11274 1271 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 YWHAEP62258 255 aaKnown RBP9.85□□□□□ -0.83
COL6A5-202ENST00000312481 PUM3Q15397 648 aaKnown RBP9.85□□□□□ -0.83
COL6A5-202ENST00000312481 GRK7Q8WTQ7 553 aa9.85□□□□□ -0.83
COL6A5-202ENST00000312481 GAS8O95995 478 aa9.84□□□□□ -0.83
COL6A5-202ENST00000312481 CBX1P83916 185 aa9.84□□□□□ -0.83
COL6A5-202ENST00000312481 DNM1Q05193 864 aaKnown RBP9.84□□□□□ -0.83
COL6A5-202ENST00000312481 SCP2P22307 547 aa9.84□□□□□ -0.83
COL6A5-202ENST00000312481 TRIM11Q96F44 468 aa9.84□□□□□ -0.83
COL6A5-202ENST00000312481 METTL14Q9HCE5 456 aaKnown RBP9.84□□□□□ -0.83
COL6A5-202ENST00000312481 VIMP08670 466 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms