RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 RETREG2Q8NC44 543 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 EIF3CQ99613 913 aaKnown RBP3.57□□□□□ -1.84
CLOCK-201ENST00000309964 RIOK1Q9BRS2 568 aaKnown RBP3.57□□□□□ -1.84
CLOCK-201ENST00000309964 N4BP3O15049 544 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 FOSBP53539 338 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 RAB3GAP1Q15042 981 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 LIN9Q5TKA1 542 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 EFCAB13Q8IY85 973 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 MAGEB6Q8N7X4 407 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 DDX23Q9BUQ8 820 aaKnown RBP3.57□□□□□ -1.84
CLOCK-201ENST00000309964 ATP8A2Q9NTI2 1148 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 FAM184BQ9ULE4 1060 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 DNM3Q9UQ16 869 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 PCDHB13Q9Y5F0 798 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 A0A1W2PP64 1363 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 SAMD9LQ8IVG5 1584 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 GOLGA8QA0A0J9YX86 632 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 MACROD2A1Z1Q3 448 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 GOLGA8OA6NCC3 632 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 GOLGA8NF8WBI6 632 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 GRIN3BO60391 1043 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 CHMP4BP1P59074 171 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 SARNPP82979 210 aaKnown RBP3.57□□□□□ -1.84
CLOCK-201ENST00000309964 KLHL10Q6JEL2 608 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 FCHSD1Q86WN1 690 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 NEK11Q8NG66 645 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 CTNNBL1Q8WYA6 563 aaPredicted RBP3.57□□□□□ -1.84
CLOCK-201ENST00000309964 TBC1D2Q9BYX2 928 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 TRPC6Q9Y210 931 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 KIAA1210Q9ULL0 1709 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 KLF18A0A0U1RQI7 1052 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 UFL1O94874 794 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 IVLP07476 585 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 ITGA6P23229 1130 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 IREB2P48200 963 aaKnown RBP3.57□□□□□ -1.84
CLOCK-201ENST00000309964 PICALMQ13492 652 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 TEX2Q8IWB9 1127 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 QTRT2Q9H974 415 aaKnown RBP3.57□□□□□ -1.84
CLOCK-201ENST00000309964 VAT1LQ9HCJ6 419 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 PUF60Q9UHX1 559 aaKnown RBP3.57□□□□□ -1.84
CLOCK-201ENST00000309964 ATP6V0A2Q9Y487 856 aa3.57□□□□□ -1.84
CLOCK-201ENST00000309964 ZMYM4Q5VZL5 1548 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 NCKAP5LQ9HCH0 1330 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 TACC1O75410 805 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 GCFC2P16383 781 aaKnown RBP3.56□□□□□ -1.84
CLOCK-201ENST00000309964 PDE1AP54750 535 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 RAB11FIP4Q86YS3 637 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 ZBTB8OSQ8IWT0 167 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 BBS5Q8N3I7 341 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 CCDC26Q8TAB7 109 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 CDCA7LQ96GN5 454 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 BSDC1Q9NW68 430 aaPredicted RBP3.56□□□□□ -1.84
CLOCK-201ENST00000309964 LCMT1Q9UIC8 334 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 IQSEC3Q9UPP2 1182 aaPredicted RBP3.56□□□□□ -1.84
CLOCK-201ENST00000309964 GJA3Q9Y6H8 435 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 KDM2BQ8NHM5 1336 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 MAP3K4Q9Y6R4 1608 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 PSDA5PKW4 1024 aaPredicted RBP3.56□□□□□ -1.84
CLOCK-201ENST00000309964 ZSCAN20P17040 1043 aaPredicted RBP3.56□□□□□ -1.84
CLOCK-201ENST00000309964 GBP1P32455 592 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 YARSP54577 528 aaKnown RBP3.56□□□□□ -1.84
CLOCK-201ENST00000309964 CFAP58Q5T655 872 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 SYCE1Q8N0S2 351 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 CCDC42Q96M95 316 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 PPP1R9BQ96SB3 815 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 CCPG1Q9ULG6 757 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 SSH2Q76I76 1423 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 ASNSP08243 561 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 CCT6AP40227 531 aaKnown RBP3.56□□□□□ -1.84
CLOCK-201ENST00000309964 SURF1Q15526 300 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 MAP7D1Q3KQU3 841 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 ZNF354CQ86Y25 554 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 NUTM1Q86Y26 1132 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 REXO1Q8N1G1 1221 aaKnown RBP3.56□□□□□ -1.84
CLOCK-201ENST00000309964 UBL4BQ8N7F7 174 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 AK8Q96MA6 479 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 CENPHQ9H3R5 247 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 GPR108Q9NPR9 543 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 TSKSQ9UJT2 592 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 FER1L4A9Z1Z3 1794 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 TRIM37O94972 964 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 AMER1Q5JTC6 1135 aaPredicted RBP3.56□□□□□ -1.84
CLOCK-201ENST00000309964 SND1Q7KZF4 910 aaKnown RBP eCLIP3.56□□□□□ -1.84
CLOCK-201ENST00000309964 HOMEZQ8IX15 550 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 STK11IPQ8N1F8 1099 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 FSIP1Q8NA03 581 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 KBTBD3Q8NAB2 608 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 SMC1BQ8NDV3 1235 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 CSRNP1Q96S65 589 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 PARP2Q9UGN5 583 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 FBXO40Q9UH90 709 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 BCAP29Q9UHQ4 241 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 IPO11Q9UI26 975 aaKnown RBP3.56□□□□□ -1.84
CLOCK-201ENST00000309964 CTAGE9A4FU28 777 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 CETN3O15182 167 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 PTPREP23469 700 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 UBASH3AP57075 661 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 RBM6P78332 1123 aaKnown RBP3.56□□□□□ -1.84
CLOCK-201ENST00000309964 UBE4AQ14139 1066 aa3.56□□□□□ -1.84
CLOCK-201ENST00000309964 SNX21Q969T3 373 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms