RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 CAND2O75155 1236 aa12.15□□□□□ -0.46
GGA2-201ENST00000309859 NUP160Q12769 1436 aa12.15□□□□□ -0.46
GGA2-201ENST00000309859 IL17RAQ96F46 866 aa12.15□□□□□ -0.46
GGA2-201ENST00000309859 CABP5Q9NP86 173 aa12.15□□□□□ -0.46
GGA2-201ENST00000309859 ZNF185O15231 689 aa12.15□□□□□ -0.46
GGA2-201ENST00000309859 GCFC2P16383 781 aaKnown RBP12.15□□□□□ -0.46
GGA2-201ENST00000309859 KRT71Q3SY84 523 aa12.15□□□□□ -0.46
GGA2-201ENST00000309859 TMTC1Q8IUR5 882 aa12.15□□□□□ -0.46
GGA2-201ENST00000309859 LUC7LQ9NQ29 371 aaKnown RBP12.15□□□□□ -0.46
GGA2-201ENST00000309859 IRAK1P51617 712 aa12.15□□□□□ -0.46
GGA2-201ENST00000309859 GPHNQ9NQX3 736 aaPredicted RBP12.15□□□□□ -0.46
GGA2-201ENST00000309859 ZNF518AQ6AHZ1 1483 aa12.15□□□□□ -0.46
GGA2-201ENST00000309859 PPP1R12AO14974 1030 aaPredicted RBP12.15□□□□□ -0.47
GGA2-201ENST00000309859 PFKFB2O60825 505 aa12.15□□□□□ -0.47
GGA2-201ENST00000309859 SOGA3Q5TF21 947 aa12.15□□□□□ -0.47
GGA2-201ENST00000309859 NAA16Q6N069 864 aaPredicted RBP12.15□□□□□ -0.47
GGA2-201ENST00000309859 TYW1BQ6NUM6 668 aa12.15□□□□□ -0.47
GGA2-201ENST00000309859 LMNTD2Q8IXW0 634 aa12.15□□□□□ -0.47
GGA2-201ENST00000309859 USP44Q9H0E7 712 aa12.15□□□□□ -0.47
GGA2-201ENST00000309859 IQGAP2Q13576 1575 aa12.15□□□□□ -0.47
GGA2-201ENST00000309859 NSD2O96028 1365 aa12.15□□□□□ -0.47
GGA2-201ENST00000309859 SSH2Q76I76 1423 aa12.14□□□□□ -0.47
GGA2-201ENST00000309859 A1BGP04217 495 aa12.14□□□□□ -0.47
GGA2-201ENST00000309859 CNGA1P29973 690 aa12.14□□□□□ -0.47
GGA2-201ENST00000309859 CTNNA1P35221 906 aaKnown RBP12.14□□□□□ -0.47
GGA2-201ENST00000309859 ZNF530Q6P9A1 599 aaPredicted RBP12.14□□□□□ -0.47
GGA2-201ENST00000309859 AIFM3Q96NN9 605 aa12.14□□□□□ -0.47
GGA2-201ENST00000309859 C14orf93Q9H972 538 aaKnown RBP12.14□□□□□ -0.47
GGA2-201ENST00000309859 PSD3Q9NYI0 1048 aa12.14□□□□□ -0.47
GGA2-201ENST00000309859 CD109Q6YHK3 1445 aa12.14□□□□□ -0.47
GGA2-201ENST00000309859 MINDY4BA8MYZ0 360 aa12.14□□□□□ -0.47
GGA2-201ENST00000309859 TFCP2Q12800 502 aa12.14□□□□□ -0.47
GGA2-201ENST00000309859 SPTY2D1Q68D10 685 aaPredicted RBP12.14□□□□□ -0.47
GGA2-201ENST00000309859 CAPRIN2Q6IMN6 1127 aaKnown RBP12.14□□□□□ -0.47
GGA2-201ENST00000309859 TM6SF1Q9BZW5 370 aa12.14□□□□□ -0.47
GGA2-201ENST00000309859 FAM114A2Q9NRY5 505 aa12.14□□□□□ -0.47
GGA2-201ENST00000309859 TAF6LQ9Y6J9 622 aa12.14□□□□□ -0.47
GGA2-201ENST00000309859 FOXN1O15353 648 aa12.14□□□□□ -0.47
GGA2-201ENST00000309859 TEX33O43247 280 aa12.14□□□□□ -0.47
GGA2-201ENST00000309859 CDC25AP30304 524 aa12.14□□□□□ -0.47
GGA2-201ENST00000309859 BEND6Q5SZJ8 279 aaPredicted RBP12.14□□□□□ -0.47
GGA2-201ENST00000309859 CYP27A1Q02318 531 aa12.14□□□□□ -0.47
GGA2-201ENST00000309859 RCOR1Q9UKL0 485 aa12.14□□□□□ -0.47
GGA2-201ENST00000309859 ABCA10Q8WWZ4 1543 aa12.14□□□□□ -0.47
GGA2-201ENST00000309859 TOB2Q14106 344 aaPredicted RBP12.14□□□□□ -0.47
GGA2-201ENST00000309859 UBE3BQ7Z3V4 1068 aa12.14□□□□□ -0.47
GGA2-201ENST00000309859 IFT20Q8IY31 132 aa12.14□□□□□ -0.47
GGA2-201ENST00000309859 NUDT16Q96DE0 195 aaKnown RBP12.14□□□□□ -0.47
GGA2-201ENST00000309859 MAGI1Q96QZ7 1491 aaPredicted RBP12.14□□□□□ -0.47
GGA2-201ENST00000309859 ADCY1Q08828 1119 aa12.13□□□□□ -0.47
GGA2-201ENST00000309859 NCOA7Q8NI08 942 aa12.13□□□□□ -0.47
GGA2-201ENST00000309859 TSC22D3Q99576 134 aa12.13□□□□□ -0.47
GGA2-201ENST00000309859 NR1D1P20393 614 aa12.13□□□□□ -0.47
GGA2-201ENST00000309859 PPARAQ07869 468 aa12.13□□□□□ -0.47
GGA2-201ENST00000309859 BRAPQ7Z569 592 aa12.13□□□□□ -0.47
GGA2-201ENST00000309859 NSUN7Q8NE18 718 aaKnown RBP12.13□□□□□ -0.47
GGA2-201ENST00000309859 SH3GL3Q99963 347 aa12.13□□□□□ -0.47
GGA2-201ENST00000309859 EPB41L5Q9HCM4 733 aa12.13□□□□□ -0.47
GGA2-201ENST00000309859 DDX21Q9NR30 783 aaKnown RBP eCLIP12.13□□□□□ -0.47
GGA2-201ENST00000309859 EIF2AK4Q9P2K8 1649 aaKnown RBP12.13□□□□□ -0.47
GGA2-201ENST00000309859 TAF11Q15544 211 aa12.13□□□□□ -0.47
GGA2-201ENST00000309859 ZNF174Q15697 407 aa12.13□□□□□ -0.47
GGA2-201ENST00000309859 GKAP1Q5VSY0 366 aaPredicted RBP12.13□□□□□ -0.47
GGA2-201ENST00000309859 SMARCAL1Q9NZC9 954 aa12.13□□□□□ -0.47
GGA2-201ENST00000309859 PIK3R4Q99570 1358 aa12.13□□□□□ -0.47
GGA2-201ENST00000309859 FNBP4Q8N3X1 1017 aaPredicted RBP12.13□□□□□ -0.47
GGA2-201ENST00000309859 KRT13P13646 458 aa12.12□□□□□ -0.47
GGA2-201ENST00000309859 ADAT2Q7Z6V5 191 aaKnown RBP12.12□□□□□ -0.47
GGA2-201ENST00000309859 MRRFQ96E11 262 aaKnown RBP12.12□□□□□ -0.47
GGA2-201ENST00000309859 NFU1Q9UMS0 254 aa12.12□□□□□ -0.47
GGA2-201ENST00000309859 EPN1Q9Y6I3 576 aaPredicted RBP12.12□□□□□ -0.47
GGA2-201ENST00000309859 A0A0U1RQJ8 604 aa12.12□□□□□ -0.47
GGA2-201ENST00000309859 GSTTP1A0A1W2PQM5 241 aa12.12□□□□□ -0.47
GGA2-201ENST00000309859 ZBTB43O43298 467 aa12.12□□□□□ -0.47
GGA2-201ENST00000309859 TUBB2AQ13885 445 aa12.12□□□□□ -0.47
GGA2-201ENST00000309859 TUBB2BQ9BVA1 445 aa12.12□□□□□ -0.47
GGA2-201ENST00000309859 NUCKS1Q9H1E3 243 aaKnown RBP12.12□□□□□ -0.47
GGA2-201ENST00000309859 NUP153P49790 1475 aaKnown RBP12.12□□□□□ -0.47
GGA2-201ENST00000309859 FCHSD1Q86WN1 690 aa12.12□□□□□ -0.47
GGA2-201ENST00000309859 VPS37DQ86XT2 251 aa12.12□□□□□ -0.47
GGA2-201ENST00000309859 ANKRD42Q8N9B4 389 aa12.12□□□□□ -0.47
GGA2-201ENST00000309859 NSRP1Q9H0G5 558 aaKnown RBP12.12□□□□□ -0.47
GGA2-201ENST00000309859 MEFVO15553 781 aaPredicted RBP12.12□□□□□ -0.47
GGA2-201ENST00000309859 TOM1L2Q6ZVM7 507 aa12.12□□□□□ -0.47
GGA2-201ENST00000309859 STAG1Q8WVM7 1258 aa12.12□□□□□ -0.47
GGA2-201ENST00000309859 PHF23Q9BUL5 403 aaPredicted RBP12.12□□□□□ -0.47
GGA2-201ENST00000309859 LINC00301Q8NCQ3 95 aa12.12□□□□□ -0.47
GGA2-201ENST00000309859 PI4K2BQ8TCG2 481 aa12.12□□□□□ -0.47
GGA2-201ENST00000309859 ABTB1Q969K4 478 aaPredicted RBP12.12□□□□□ -0.47
GGA2-201ENST00000309859 SLC40A1Q9NP59 571 aa12.12□□□□□ -0.47
GGA2-201ENST00000309859 HPCAL4Q9UM19 191 aa12.12□□□□□ -0.47
GGA2-201ENST00000309859 LRRD1A4D1F6 860 aa12.11□□□□□ -0.47
GGA2-201ENST00000309859 KRT14P02533 472 aa12.11□□□□□ -0.47
GGA2-201ENST00000309859 KANK3Q6NY19 840 aa12.11□□□□□ -0.47
GGA2-201ENST00000309859 PROCA1Q8NCQ7 364 aaPredicted RBP12.11□□□□□ -0.47
GGA2-201ENST00000309859 RRP36Q96EU6 259 aaKnown RBP12.11□□□□□ -0.47
GGA2-201ENST00000309859 KRT12Q99456 494 aa12.11□□□□□ -0.47
GGA2-201ENST00000309859 TBC1D2BQ9UPU7 963 aa12.11□□□□□ -0.47
GGA2-201ENST00000309859 KDM5DQ9BY66 1539 aa12.11□□□□□ -0.47
GGA2-201ENST00000309859 CHGBP05060 677 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms