RNA–Protein interactions for RNA: ENST00000308961.4

NDUFA11-201, Transcript of NADH:ubiquinone oxidoreductase subunit A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA11, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11-201ENST00000308961 TNFAIP1Q13829 316 aa20.31■□□□□ 0.84
NDUFA11-201ENST00000308961 DHX36Q9H2U1 1008 aaKnown RBP20.31■□□□□ 0.84
NDUFA11-201ENST00000308961 COL2A1P02458 1487 aaPredicted RBP20.3■□□□□ 0.84
NDUFA11-201ENST00000308961 SIPA1L1O43166 1804 aa20.3■□□□□ 0.84
NDUFA11-201ENST00000308961 FAM196BA6NMK8 535 aa20.3■□□□□ 0.84
NDUFA11-201ENST00000308961 E7EWF7 191 aa20.3■□□□□ 0.84
NDUFA11-201ENST00000308961 MCCP23508 829 aa20.3■□□□□ 0.84
NDUFA11-201ENST00000308961 NBPF12Q5TAG4 269 aaPredicted RBP20.3■□□□□ 0.84
NDUFA11-201ENST00000308961 RNF20Q5VTR2 975 aa20.3■□□□□ 0.84
NDUFA11-201ENST00000308961 MAP1SQ66K74 1059 aaPredicted RBP20.3■□□□□ 0.84
NDUFA11-201ENST00000308961 CSRNP1Q96S65 589 aa20.3■□□□□ 0.84
NDUFA11-201ENST00000308961 GLIS2Q9BZE0 524 aaPredicted RBP20.3■□□□□ 0.84
NDUFA11-201ENST00000308961 DNAJC18Q9H819 358 aa20.3■□□□□ 0.84
NDUFA11-201ENST00000308961 PI4KBQ9UBF8 816 aa20.3■□□□□ 0.84
NDUFA11-201ENST00000308961 HLA-DOAP06340 250 aa20.29■□□□□ 0.84
NDUFA11-201ENST00000308961 FGRP09769 529 aa20.29■□□□□ 0.84
NDUFA11-201ENST00000308961 AKNAD1Q5T1N1 836 aa20.29■□□□□ 0.84
NDUFA11-201ENST00000308961 KRT26Q7Z3Y9 468 aa20.29■□□□□ 0.84
NDUFA11-201ENST00000308961 METTL16Q86W50 562 aaKnown RBP20.29■□□□□ 0.84
NDUFA11-201ENST00000308961 FOXP4Q8IVH2 680 aaPredicted RBP20.29■□□□□ 0.84
NDUFA11-201ENST00000308961 AMOTL1Q8IY63 956 aa20.29■□□□□ 0.84
NDUFA11-201ENST00000308961 STAG1Q8WVM7 1258 aa20.29■□□□□ 0.84
NDUFA11-201ENST00000308961 IL17RAQ96F46 866 aa20.29■□□□□ 0.84
NDUFA11-201ENST00000308961 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.29■□□□□ 0.84
NDUFA11-201ENST00000308961 ROBO3Q96MS0 1386 aa20.29■□□□□ 0.84
NDUFA11-201ENST00000308961 LAMA4Q16363 1823 aa20.29■□□□□ 0.84
NDUFA11-201ENST00000308961 LAMB1P07942 1786 aa20.29■□□□□ 0.84
NDUFA11-201ENST00000308961 NEDD4P46934 1319 aa20.28■□□□□ 0.84
NDUFA11-201ENST00000308961 PRDM1O75626 825 aa20.28■□□□□ 0.84
NDUFA11-201ENST00000308961 CDK8P49336 464 aa20.28■□□□□ 0.84
NDUFA11-201ENST00000308961 C16orf86Q6ZW13 317 aa20.28■□□□□ 0.84
NDUFA11-201ENST00000308961 MIGA2Q7L4E1 593 aa20.28■□□□□ 0.84
NDUFA11-201ENST00000308961 LDHDQ86WU2 507 aa20.28■□□□□ 0.84
NDUFA11-201ENST00000308961 SULF1Q8IWU6 871 aa20.28■□□□□ 0.84
NDUFA11-201ENST00000308961 EHD4Q9H223 541 aa20.28■□□□□ 0.84
NDUFA11-201ENST00000308961 GPBP1L1Q9HC44 474 aaPredicted RBP20.28■□□□□ 0.84
NDUFA11-201ENST00000308961 SERPINB13Q9UIV8 391 aa20.28■□□□□ 0.84
NDUFA11-201ENST00000308961 KIF3CO14782 793 aa20.27■□□□□ 0.84
NDUFA11-201ENST00000308961 CPA1P15085 419 aa20.27■□□□□ 0.84
NDUFA11-201ENST00000308961 ZKSCAN1P17029 563 aaPredicted RBP20.27■□□□□ 0.84
NDUFA11-201ENST00000308961 SHMT1P34896 483 aa20.27■□□□□ 0.84
NDUFA11-201ENST00000308961 ANAPC15P60006 121 aa20.27■□□□□ 0.84
NDUFA11-201ENST00000308961 FMR1Q06787 632 aaKnown RBP eCLIP20.27■□□□□ 0.848e-10■■■■■ 54.7
NDUFA11-201ENST00000308961 RRP1BQ14684 758 aaKnown RBP20.27■□□□□ 0.84
NDUFA11-201ENST00000308961 MFSD6Q6ZSS7 791 aa20.27■□□□□ 0.84
NDUFA11-201ENST00000308961 PPP2R3BQ9Y5P8 575 aa20.27■□□□□ 0.84
NDUFA11-201ENST00000308961 YY1P25490 414 aa20.26■□□□□ 0.83
NDUFA11-201ENST00000308961 MAP3K10Q02779 954 aa20.26■□□□□ 0.83
NDUFA11-201ENST00000308961 CDC37L1Q7L3B6 337 aa20.26■□□□□ 0.83
NDUFA11-201ENST00000308961 JAKMIP1Q96N16 626 aaKnown RBP20.26■□□□□ 0.83
NDUFA11-201ENST00000308961 B4E1Z4 1266 aa20.25■□□□□ 0.83
NDUFA11-201ENST00000308961 TRAF5O00463 557 aa20.25■□□□□ 0.83
NDUFA11-201ENST00000308961 SLC3A2P08195 630 aaKnown RBP20.25■□□□□ 0.83
NDUFA11-201ENST00000308961 RASA1P20936 1047 aa20.25■□□□□ 0.83
NDUFA11-201ENST00000308961 RRP12Q5JTH9 1297 aaKnown RBP20.25■□□□□ 0.83
NDUFA11-201ENST00000308961 CRACR2BQ8N4Y2 399 aaPredicted RBP20.25■□□□□ 0.83
NDUFA11-201ENST00000308961 CDCA5Q96FF9 252 aa20.25■□□□□ 0.83
NDUFA11-201ENST00000308961 NEK1Q96PY6 1258 aa20.25■□□□□ 0.83
NDUFA11-201ENST00000308961 FZD1Q9UP38 647 aa20.25■□□□□ 0.83
NDUFA11-201ENST00000308961 SSC5DA1L4H1 1573 aa20.25■□□□□ 0.83
NDUFA11-201ENST00000308961 ORC4O43929 436 aa20.24■□□□□ 0.83
NDUFA11-201ENST00000308961 TBC1D12O60347 775 aa20.24■□□□□ 0.83
NDUFA11-201ENST00000308961 JAG1P78504 1218 aa20.24■□□□□ 0.83
NDUFA11-201ENST00000308961 PDE4BQ07343 736 aa20.24■□□□□ 0.83
NDUFA11-201ENST00000308961 CYB5R4Q7L1T6 521 aa20.24■□□□□ 0.83
NDUFA11-201ENST00000308961 MB21D2Q8IYB1 491 aaPredicted RBP20.24■□□□□ 0.83
NDUFA11-201ENST00000308961 RNF41Q9H4P4 317 aaPredicted RBP20.24■□□□□ 0.83
NDUFA11-201ENST00000308961 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.24■□□□□ 0.83
NDUFA11-201ENST00000308961 TOMM22Q9NS69 142 aa20.24■□□□□ 0.83
NDUFA11-201ENST00000308961 KRT32Q14532 448 aa20.23■□□□□ 0.83
NDUFA11-201ENST00000308961 SHROOM1Q2M3G4 852 aaPredicted RBP20.23■□□□□ 0.83
NDUFA11-201ENST00000308961 FAM47AQ5JRC9 791 aa20.23■□□□□ 0.83
NDUFA11-201ENST00000308961 TATDN1Q6P1N9 297 aa20.23■□□□□ 0.83
NDUFA11-201ENST00000308961 NCOA7Q8NI08 942 aa20.23■□□□□ 0.83
NDUFA11-201ENST00000308961 UPF3BQ9BZI7 483 aaKnown RBP20.23■□□□□ 0.83
NDUFA11-201ENST00000308961 TM6SF1Q9BZW5 370 aa20.23■□□□□ 0.83
NDUFA11-201ENST00000308961 MKNK2Q9HBH9 465 aa20.23■□□□□ 0.83
NDUFA11-201ENST00000308961 ZSWIM6Q9HCJ5 1215 aa20.23■□□□□ 0.83
NDUFA11-201ENST00000308961 SWAP70Q9UH65 585 aa20.23■□□□□ 0.83
NDUFA11-201ENST00000308961 HERC5Q9UII4 1024 aaKnown RBP20.23■□□□□ 0.83
NDUFA11-201ENST00000308961 KDM4AO75164 1064 aa20.22■□□□□ 0.83
NDUFA11-201ENST00000308961 ANTXR2P58335 489 aa20.22■□□□□ 0.83
NDUFA11-201ENST00000308961 CHADLQ6NUI6 762 aa20.22■□□□□ 0.83
NDUFA11-201ENST00000308961 CHST3Q7LGC8 479 aa20.22■□□□□ 0.83
NDUFA11-201ENST00000308961 TCEANC2Q96MN5 208 aa20.22■□□□□ 0.83
NDUFA11-201ENST00000308961 TSHZ2Q9NRE2 1034 aa20.22■□□□□ 0.83
NDUFA11-201ENST00000308961 ZSWIM5Q9P217 1185 aa20.22■□□□□ 0.83
NDUFA11-201ENST00000308961 PHF20L1A8MW92 1017 aa20.21■□□□□ 0.83
NDUFA11-201ENST00000308961 RANBP6O60518 1105 aaKnown RBP20.21■□□□□ 0.83
NDUFA11-201ENST00000308961 ITGBL1O95965 494 aaPredicted RBP20.21■□□□□ 0.83
NDUFA11-201ENST00000308961 PCP11498 1178 aaKnown RBP20.21■□□□□ 0.83
NDUFA11-201ENST00000308961 AKR1B1P15121 316 aa20.21■□□□□ 0.83
NDUFA11-201ENST00000308961 CASTP20810 708 aaKnown RBP20.21■□□□□ 0.83
NDUFA11-201ENST00000308961 TFAP4Q01664 338 aa20.21■□□□□ 0.83
NDUFA11-201ENST00000308961 EXOSC10Q01780 885 aaKnown RBP20.21■□□□□ 0.83
NDUFA11-201ENST00000308961 PRKG1Q13976 671 aa20.21■□□□□ 0.83
NDUFA11-201ENST00000308961 SUPT20HL1Q3ZLR7 823 aa20.21■□□□□ 0.83
NDUFA11-201ENST00000308961 ZNF444Q8N0Y2 327 aaPredicted RBP20.21■□□□□ 0.83
NDUFA11-201ENST00000308961 ZNF784Q8NCA9 323 aaPredicted RBP20.21■□□□□ 0.83
NDUFA11-201ENST00000308961 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms