RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 A1BGP04217 495 aa11.86□□□□□ -0.51
MSRB3-201ENST00000308259 ERCC3P19447 782 aa11.86□□□□□ -0.51
MSRB3-201ENST00000308259 SH3GL3Q99963 347 aa11.86□□□□□ -0.51
MSRB3-201ENST00000308259 FAM169AQ9Y6X4 670 aa11.86□□□□□ -0.51
MSRB3-201ENST00000308259 SNRPA1P09661 255 aaKnown RBP11.86□□□□□ -0.51
MSRB3-201ENST00000308259 PTPN21Q16825 1174 aa11.86□□□□□ -0.51
MSRB3-201ENST00000308259 PPP1R13BQ96KQ4 1090 aa11.86□□□□□ -0.51
MSRB3-201ENST00000308259 PAG1Q9NWQ8 432 aa11.86□□□□□ -0.51
MSRB3-201ENST00000308259 U3KPZ7 1027 aaPredicted RBP11.86□□□□□ -0.51
MSRB3-201ENST00000308259 GOLGA6L10A6NI86 522 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 TPD52L2O43399 206 aaKnown RBP11.85□□□□□ -0.51
MSRB3-201ENST00000308259 ZPR1O75312 459 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 DBN1Q16643 649 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 PI16Q6UXB8 463 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 FSIP1Q8NA03 581 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 ZBTB10Q96DT7 871 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 KDM3BQ7LBC6 1761 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 KRT32Q14532 448 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 WASHC4Q2M389 1173 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 CAGE1Q8TC20 777 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 HAUS7Q99871 368 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 CD248Q9HCU0 757 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 IFNKQ9P0W0 207 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 KDM6AO15550 1401 aaPredicted RBP11.85□□□□□ -0.51
MSRB3-201ENST00000308259 TNS3Q68CZ2 1445 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 AP1G2O75843 785 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 NBPF14Q5TI25 921 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 USPL1Q5W0Q7 1092 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 MICALCLQ6ZW33 695 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 SPDL1Q96EA4 605 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 ANO10Q9NW15 660 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.85□□□□□ -0.51
MSRB3-201ENST00000308259 STX1AQ16623 288 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 CPLX2Q6PUV4 134 aaKnown RBP11.85□□□□□ -0.51
MSRB3-201ENST00000308259 PLA2G4DQ86XP0 818 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 JMYQ8N9B5 988 aa11.85□□□□□ -0.51
MSRB3-201ENST00000308259 E7EWF7 191 aa11.84□□□□□ -0.51
MSRB3-201ENST00000308259 M0R2C6 588 aa11.84□□□□□ -0.51
MSRB3-201ENST00000308259 RXRAP19793 462 aa11.84□□□□□ -0.51
MSRB3-201ENST00000308259 ADD1P35611 737 aaKnown RBP11.84□□□□□ -0.51
MSRB3-201ENST00000308259 SWT1Q5T5J6 900 aaKnown RBP11.84□□□□□ -0.51
MSRB3-201ENST00000308259 DHX32Q7L7V1 743 aaKnown RBP11.84□□□□□ -0.51
MSRB3-201ENST00000308259 KBTBD3Q8NAB2 608 aa11.84□□□□□ -0.51
MSRB3-201ENST00000308259 FAM76AQ8TAV0 307 aa11.84□□□□□ -0.51
MSRB3-201ENST00000308259 CHUKO15111 745 aa11.84□□□□□ -0.51
MSRB3-201ENST00000308259 RANBP1P43487 201 aa11.84□□□□□ -0.51
MSRB3-201ENST00000308259 CCDC70Q6NSX1 233 aa11.84□□□□□ -0.51
MSRB3-201ENST00000308259 ATRIPQ8WXE1 791 aa11.84□□□□□ -0.51
MSRB3-201ENST00000308259 MIEF2Q96C03 454 aa11.84□□□□□ -0.51
MSRB3-201ENST00000308259 NBPF26B4DH59 902 aa11.84□□□□□ -0.51
MSRB3-201ENST00000308259 TBC1D8O95759 1140 aa11.84□□□□□ -0.51
MSRB3-201ENST00000308259 HSPD1P10809 573 aaKnown RBP11.84□□□□□ -0.51
MSRB3-201ENST00000308259 NBPF10Q6P3W6 841 aaKnown RBP11.84□□□□□ -0.51
MSRB3-201ENST00000308259 LRP10Q7Z4F1 713 aa11.84□□□□□ -0.51
MSRB3-201ENST00000308259 NBPF15Q8N660 670 aa11.84□□□□□ -0.51
MSRB3-201ENST00000308259 ACRBPQ8NEB7 543 aa11.84□□□□□ -0.51
MSRB3-201ENST00000308259 NBPF3Q9H094 633 aa11.84□□□□□ -0.51
MSRB3-201ENST00000308259 CFAP45Q9UL16 551 aa11.84□□□□□ -0.51
MSRB3-201ENST00000308259 DENND2AQ9ULE3 1009 aa11.84□□□□□ -0.51
MSRB3-201ENST00000308259 THRAP3Q9Y2W1 955 aaKnown RBP11.84□□□□□ -0.51
MSRB3-201ENST00000308259 IFIT1P09914 478 aaKnown RBP11.83□□□□□ -0.52
MSRB3-201ENST00000308259 ADORA1P30542 326 aa11.83□□□□□ -0.52
MSRB3-201ENST00000308259 CHMP4BP1P59074 171 aa11.83□□□□□ -0.52
MSRB3-201ENST00000308259 TDRD7Q8NHU6 1098 aaKnown RBP11.83□□□□□ -0.52
MSRB3-201ENST00000308259 KIF9Q9HAQ2 790 aa11.83□□□□□ -0.52
MSRB3-201ENST00000308259 QTRT2Q9H974 415 aaKnown RBP11.83□□□□□ -0.52
MSRB3-201ENST00000308259 PPP1R12BO60237 982 aaPredicted RBP11.83□□□□□ -0.52
MSRB3-201ENST00000308259 TOP1P11387 765 aaKnown RBP11.83□□□□□ -0.52
MSRB3-201ENST00000308259 HSP90AA4PQ58FG1 418 aa11.83□□□□□ -0.52
MSRB3-201ENST00000308259 NFXL1Q6ZNB6 911 aa11.83□□□□□ -0.52
MSRB3-201ENST00000308259 ATG9AQ7Z3C6 839 aa11.83□□□□□ -0.52
MSRB3-201ENST00000308259 ILDR1Q86SU0 546 aaPredicted RBP11.83□□□□□ -0.52
MSRB3-201ENST00000308259 CRYBG1Q9Y4K1 1723 aa11.83□□□□□ -0.52
MSRB3-201ENST00000308259 SASH3O75995 380 aa11.83□□□□□ -0.52
MSRB3-201ENST00000308259 TSGA10IPQ3SY00 556 aa11.83□□□□□ -0.52
MSRB3-201ENST00000308259 MAST3O60307 1309 aa11.82□□□□□ -0.52
MSRB3-201ENST00000308259 POTEB2H3BUK9 544 aa11.82□□□□□ -0.52
MSRB3-201ENST00000308259 PFKFB2O60825 505 aa11.82□□□□□ -0.52
MSRB3-201ENST00000308259 N4BP1O75113 896 aaKnown RBP11.82□□□□□ -0.52
MSRB3-201ENST00000308259 PDIA3P30101 505 aaKnown RBP11.82□□□□□ -0.52
MSRB3-201ENST00000308259 IQCB1Q15051 598 aa11.82□□□□□ -0.52
MSRB3-201ENST00000308259 OSBP2Q969R2 916 aa11.82□□□□□ -0.52
MSRB3-201ENST00000308259 SAAL1Q96ER3 474 aa11.82□□□□□ -0.52
MSRB3-201ENST00000308259 THOC1Q96FV9 657 aaKnown RBP11.82□□□□□ -0.52
MSRB3-201ENST00000308259 CLIC4Q9Y696 253 aa11.82□□□□□ -0.52
MSRB3-201ENST00000308259 N4BP2Q86UW6 1770 aaPredicted RBP11.82□□□□□ -0.52
MSRB3-201ENST00000308259 WDR17Q8IZU2 1322 aa11.82□□□□□ -0.52
MSRB3-201ENST00000308259 H3BQF6 201 aa11.82□□□□□ -0.52
MSRB3-201ENST00000308259 GCFC2P16383 781 aaKnown RBP11.82□□□□□ -0.52
MSRB3-201ENST00000308259 RXRBP28702 533 aa11.82□□□□□ -0.52
MSRB3-201ENST00000308259 LMOD1P29536 600 aaPredicted RBP11.82□□□□□ -0.52
MSRB3-201ENST00000308259 FOXO4P98177 505 aa11.82□□□□□ -0.52
MSRB3-201ENST00000308259 SYNE4Q8N205 404 aa11.82□□□□□ -0.52
MSRB3-201ENST00000308259 MAP9Q49MG5 647 aa11.82□□□□□ -0.52
MSRB3-201ENST00000308259 TBC1D31Q96DN5 1066 aa11.82□□□□□ -0.52
MSRB3-201ENST00000308259 YIPF3Q9GZM5 350 aa11.82□□□□□ -0.52
MSRB3-201ENST00000308259 ZSCAN16Q9H4T2 348 aaPredicted RBP11.82□□□□□ -0.52
MSRB3-201ENST00000308259 LZTFL1Q9NQ48 299 aa11.82□□□□□ -0.52
MSRB3-201ENST00000308259 FAM98CQ17RN3 349 aaKnown RBP11.81□□□□□ -0.52
MSRB3-201ENST00000308259 DZIP1Q86YF9 867 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms