RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 SLC26A6Q9BXS9 759 aa7.62□□□□□ -1.19
USP47-201ENST00000305481 NUP62CLQ9H1M0 184 aa7.62□□□□□ -1.19
USP47-201ENST00000305481 ERICH2A1L162 156 aa7.62□□□□□ -1.19
USP47-201ENST00000305481 USP17L8P0C7I0 530 aa7.62□□□□□ -1.19
USP47-201ENST00000305481 SNW1Q13573 536 aaKnown RBP7.62□□□□□ -1.19
USP47-201ENST00000305481 SBK1Q52WX2 424 aa7.62□□□□□ -1.19
USP47-201ENST00000305481 BRAPQ7Z569 592 aa7.62□□□□□ -1.19
USP47-201ENST00000305481 FAM43AQ8N2R8 423 aa7.62□□□□□ -1.19
USP47-201ENST00000305481 FANCBQ8NB91 859 aa7.62□□□□□ -1.19
USP47-201ENST00000305481 LINC00301Q8NCQ3 95 aa7.62□□□□□ -1.19
USP47-201ENST00000305481 BICD2Q8TD16 824 aa7.62□□□□□ -1.19
USP47-201ENST00000305481 CLSTN2Q9H4D0 955 aa7.62□□□□□ -1.19
USP47-201ENST00000305481 LRRC37AA6NMS7 1700 aa7.62□□□□□ -1.19
USP47-201ENST00000305481 NRXN2Q9P2S2 1712 aa7.62□□□□□ -1.19
USP47-201ENST00000305481 STK36Q9NRP7 1315 aa7.62□□□□□ -1.19
USP47-201ENST00000305481 ORC4O43929 436 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 NMT2O60551 498 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 PCP11498 1178 aaKnown RBP7.61□□□□□ -1.19
USP47-201ENST00000305481 RTN1Q16799 776 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 CPLX2Q6PUV4 134 aaKnown RBP7.61□□□□□ -1.19
USP47-201ENST00000305481 OLFM4Q6UX06 510 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 SYNE3Q6ZMZ3 975 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 NLGN1Q8N2Q7 840 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 CRACR2BQ8N4Y2 399 aaPredicted RBP7.61□□□□□ -1.19
USP47-201ENST00000305481 PCDHA7Q9UN72 937 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 SRGNP10124 158 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 RCAN1P53805 252 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 SSRP1Q08945 709 aaKnown RBP7.61□□□□□ -1.19
USP47-201ENST00000305481 SLC4A8Q2Y0W8 1093 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 CCAR1Q8IX12 1150 aaKnown RBP7.61□□□□□ -1.19
USP47-201ENST00000305481 CKAP2LQ8IYA6 745 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 CCDC82Q8N4S0 544 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 ENGASEQ8NFI3 743 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 DDX19AQ9NUU7 478 aaKnown RBP7.61□□□□□ -1.19
USP47-201ENST00000305481 POLR3EQ9NVU0 708 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 LAMB1P07942 1786 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 U2AF2P26368 475 aaKnown RBP eCLIP7.61□□□□□ -1.19
USP47-201ENST00000305481 PPP4CP60510 307 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 FUT2Q10981 343 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 MAP3K11Q16584 847 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 FAM47AQ5JRC9 791 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 SP8Q8IXZ3 490 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 NUP133Q8WUM0 1156 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 ANP32BQ92688 251 aaKnown RBP7.61□□□□□ -1.19
USP47-201ENST00000305481 SHISA4Q96DD7 197 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 RTFDC1Q9BY42 306 aaPredicted RBP7.61□□□□□ -1.19
USP47-201ENST00000305481 TNMDQ9H2S6 317 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 MCM9Q9NXL9 1143 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 ARPP21Q9UBL0 812 aaPredicted RBP7.61□□□□□ -1.19
USP47-201ENST00000305481 TAOK2Q9UL54 1235 aa7.61□□□□□ -1.19
USP47-201ENST00000305481 PPEF1O14829 653 aaPredicted RBP7.6□□□□□ -1.19
USP47-201ENST00000305481 ME1P48163 572 aa7.6□□□□□ -1.19
USP47-201ENST00000305481 TROAPQ12815 778 aa7.6□□□□□ -1.19
USP47-201ENST00000305481 C12orf60Q5U649 245 aa7.6□□□□□ -1.19
USP47-201ENST00000305481 ATP6V0A2Q9Y487 856 aa7.6□□□□□ -1.19
USP47-201ENST00000305481 MRVI1Q9Y6F6 885 aa7.6□□□□□ -1.19
USP47-201ENST00000305481 MROH7-TTC4A0A0A0MT08 1334 aa7.6□□□□□ -1.19
USP47-201ENST00000305481 DLEC1Q9Y238 1755 aa7.6□□□□□ -1.19
USP47-201ENST00000305481 IGSF3O75054 1194 aa7.6□□□□□ -1.19
USP47-201ENST00000305481 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.6□□□□□ -1.19
USP47-201ENST00000305481 C6orf229H3BNL8 230 aa7.6□□□□□ -1.19
USP47-201ENST00000305481 YEATS4O95619 227 aa7.6□□□□□ -1.19
USP47-201ENST00000305481 MMP10P09238 476 aa7.6□□□□□ -1.19
USP47-201ENST00000305481 GSTO1P78417 241 aa7.6□□□□□ -1.19
USP47-201ENST00000305481 UVSSAQ2YD98 709 aa7.6□□□□□ -1.19
USP47-201ENST00000305481 IFIT1BQ5T764 474 aaKnown RBP7.6□□□□□ -1.19
USP47-201ENST00000305481 ANO1Q5XXA6 986 aa7.6□□□□□ -1.19
USP47-201ENST00000305481 ADALQ6DHV7 355 aa7.6□□□□□ -1.19
USP47-201ENST00000305481 RCSD1Q6JBY9 416 aa7.6□□□□□ -1.19
USP47-201ENST00000305481 DYNLL2Q96FJ2 89 aa7.6□□□□□ -1.19
USP47-201ENST00000305481 MAP3K14Q99558 947 aa7.6□□□□□ -1.19
USP47-201ENST00000305481 KCNJ14Q9UNX9 436 aa7.6□□□□□ -1.19
USP47-201ENST00000305481 AP5Z1O43299 807 aa7.59□□□□□ -1.19
USP47-201ENST00000305481 PLEKHA8P1O95397 391 aa7.59□□□□□ -1.19
USP47-201ENST00000305481 CCDC192P0DO97 292 aa7.59□□□□□ -1.19
USP47-201ENST00000305481 RXRBP28702 533 aa7.59□□□□□ -1.19
USP47-201ENST00000305481 TYRO3Q06418 890 aa7.59□□□□□ -1.19
USP47-201ENST00000305481 PKN1Q16512 942 aa7.59□□□□□ -1.19
USP47-201ENST00000305481 AXDND1Q5T1B0 1012 aaPredicted RBP7.59□□□□□ -1.19
USP47-201ENST00000305481 IQCA1Q86XH1 822 aa7.59□□□□□ -1.19
USP47-201ENST00000305481 TGFBRAP1Q8WUH2 860 aa7.59□□□□□ -1.19
USP47-201ENST00000305481 GPR75-ASB3A0A0A6YYF3 556 aa7.59□□□□□ -1.19
USP47-201ENST00000305481 CCDC196A0A1B0GTZ2 297 aa7.59□□□□□ -1.19
USP47-201ENST00000305481 BTBD18B2RXH4 712 aa7.59□□□□□ -1.19
USP47-201ENST00000305481 RIMBP2O15034 1052 aa7.59□□□□□ -1.19
USP47-201ENST00000305481 SPTLC2O15270 562 aa7.59□□□□□ -1.19
USP47-201ENST00000305481 WDHD1O75717 1129 aaPredicted RBP7.59□□□□□ -1.19
USP47-201ENST00000305481 MMP1P03956 469 aa7.59□□□□□ -1.19
USP47-201ENST00000305481 USP5P45974 858 aa7.59□□□□□ -1.19
USP47-201ENST00000305481 PLCD1P51178 756 aa7.59□□□□□ -1.19
USP47-201ENST00000305481 FAM160A1Q05DH4 1040 aa7.59□□□□□ -1.19
USP47-201ENST00000305481 PTPAQ15257 358 aa7.59□□□□□ -1.19
USP47-201ENST00000305481 SF3A1Q15459 793 aaKnown RBP7.59□□□□□ -1.19
USP47-201ENST00000305481 MFSD14BQ5SR56 506 aa7.59□□□□□ -1.19
USP47-201ENST00000305481 MSL1Q68DK7 614 aa7.59□□□□□ -1.19
USP47-201ENST00000305481 FMR1NBQ8N0W7 255 aaPredicted RBP7.59□□□□□ -1.19
USP47-201ENST00000305481 FSIP1Q8NA03 581 aa7.59□□□□□ -1.19
USP47-201ENST00000305481 IL17RBQ9NRM6 502 aa7.59□□□□□ -1.19
USP47-201ENST00000305481 RGS17Q9UGC6 210 aaPredicted RBP7.59□□□□□ -1.19
USP47-201ENST00000305481 COL11A2P13942 1736 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms