RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 MICAL1Q8TDZ2 1067 aa15.8■□□□□ 0.12
HIPK3-201ENST00000303296 MRPS27Q92552 414 aaKnown RBP15.8■□□□□ 0.12
HIPK3-201ENST00000303296 CNNM2Q9H8M5 875 aa15.8■□□□□ 0.12
HIPK3-201ENST00000303296 CCDC105Q8IYK2 499 aa15.79■□□□□ 0.12
HIPK3-201ENST00000303296 TMTC2Q8N394 836 aa15.79■□□□□ 0.12
HIPK3-201ENST00000303296 CALML3P27482 149 aa15.79■□□□□ 0.12
HIPK3-201ENST00000303296 NUCB1Q02818 461 aa15.79■□□□□ 0.12
HIPK3-201ENST00000303296 NAIPQ13075 1403 aa15.79■□□□□ 0.12
HIPK3-201ENST00000303296 ZCRB1Q8TBF4 217 aaKnown RBP15.79■□□□□ 0.12
HIPK3-201ENST00000303296 KRT33BQ14525 404 aa15.79■□□□□ 0.12
HIPK3-201ENST00000303296 NUDCD3Q8IVD9 361 aa15.79■□□□□ 0.12
HIPK3-201ENST00000303296 CCDC68Q9H2F9 335 aa15.79■□□□□ 0.12
HIPK3-201ENST00000303296 KRT82Q9NSB4 513 aa15.79■□□□□ 0.12
HIPK3-201ENST00000303296 RAD51AP2Q09MP3 1159 aa15.79■□□□□ 0.12
HIPK3-201ENST00000303296 NBPF8Q3BBV2 869 aa15.79■□□□□ 0.12
HIPK3-201ENST00000303296 SV2BQ7L1I2 683 aa15.79■□□□□ 0.12
HIPK3-201ENST00000303296 TAB3Q8N5C8 712 aaPredicted RBP15.79■□□□□ 0.12
HIPK3-201ENST00000303296 ORC6Q9Y5N6 252 aa15.79■□□□□ 0.12
HIPK3-201ENST00000303296 MCUQ8NE86 351 aa15.79■□□□□ 0.12
HIPK3-201ENST00000303296 PGBD1Q96JS3 809 aa15.79■□□□□ 0.12
HIPK3-201ENST00000303296 UBN1Q9NPG3 1134 aa15.79■□□□□ 0.12
HIPK3-201ENST00000303296 ANGPTL3Q9Y5C1 460 aa15.79■□□□□ 0.12
HIPK3-201ENST00000303296 FRMD3A2A2Y4 597 aa15.78■□□□□ 0.12
HIPK3-201ENST00000303296 ECE1P42892 770 aa15.78■□□□□ 0.12
HIPK3-201ENST00000303296 CDC26Q8NHZ8 85 aa15.78■□□□□ 0.12
HIPK3-201ENST00000303296 PEX19P40855 299 aa15.78■□□□□ 0.12
HIPK3-201ENST00000303296 USP48Q86UV5 1035 aa15.78■□□□□ 0.12
HIPK3-201ENST00000303296 XPAP23025 273 aaPredicted RBP15.78■□□□□ 0.12
HIPK3-201ENST00000303296 DENND2CQ68D51 928 aa15.78■□□□□ 0.12
HIPK3-201ENST00000303296 DACT1Q9NYF0 836 aa15.78■□□□□ 0.12
HIPK3-201ENST00000303296 BCAP29Q9UHQ4 241 aa15.78■□□□□ 0.12
HIPK3-201ENST00000303296 ANAPC5Q9UJX4 755 aa15.78■□□□□ 0.12
HIPK3-201ENST00000303296 CCDC88BA6NC98 1476 aa15.78■□□□□ 0.12
HIPK3-201ENST00000303296 ZSCAN22P10073 491 aaPredicted RBP15.78■□□□□ 0.12
HIPK3-201ENST00000303296 SZRD1Q7Z422 152 aa15.78■□□□□ 0.12
HIPK3-201ENST00000303296 ECHDC1Q9NTX5 307 aa15.78■□□□□ 0.12
HIPK3-201ENST00000303296 PFDN1O60925 122 aa15.78■□□□□ 0.12
HIPK3-201ENST00000303296 ZNF174Q15697 407 aa15.78■□□□□ 0.12
HIPK3-201ENST00000303296 PLCB1Q9NQ66 1216 aa15.78■□□□□ 0.12
HIPK3-201ENST00000303296 CALUO43852 315 aaPredicted RBP15.77■□□□□ 0.12
HIPK3-201ENST00000303296 UQCRFS1P1P0C7P4 283 aa15.77■□□□□ 0.12
HIPK3-201ENST00000303296 RAPH1Q70E73 1250 aa15.77■□□□□ 0.12
HIPK3-201ENST00000303296 SUCLA2Q9P2R7 463 aaPredicted RBP15.77■□□□□ 0.12
HIPK3-201ENST00000303296 NFKBIL1Q9UBC1 381 aaPredicted RBP15.77■□□□□ 0.12
HIPK3-201ENST00000303296 ARHGAP4P98171 946 aa15.77■□□□□ 0.12
HIPK3-201ENST00000303296 DNAJC8O75937 253 aaPredicted RBP15.77■□□□□ 0.11
HIPK3-201ENST00000303296 S100BP04271 92 aaPredicted RBP15.77■□□□□ 0.11
HIPK3-201ENST00000303296 USH1GQ495M9 461 aa15.77■□□□□ 0.11
HIPK3-201ENST00000303296 SESTD1Q86VW0 696 aa15.77■□□□□ 0.11
HIPK3-201ENST00000303296 TRIM50Q86XT4 487 aa15.77■□□□□ 0.11
HIPK3-201ENST00000303296 FIS1Q9Y3D6 152 aa15.77■□□□□ 0.11
HIPK3-201ENST00000303296 PARP3Q9Y6F1 533 aa15.77■□□□□ 0.11
HIPK3-201ENST00000303296 YARSP54577 528 aaKnown RBP15.77■□□□□ 0.11
HIPK3-201ENST00000303296 CEP19Q96LK0 163 aa15.77■□□□□ 0.11
HIPK3-201ENST00000303296 MAP3K7CLP57077 242 aa15.76■□□□□ 0.11
HIPK3-201ENST00000303296 CECR2Q9BXF3 1484 aa15.76■□□□□ 0.11
HIPK3-201ENST00000303296 TEKT2Q9UIF3 430 aa15.76■□□□□ 0.11
HIPK3-201ENST00000303296 NLRP3Q96P20 1036 aa15.76■□□□□ 0.11
HIPK3-201ENST00000303296 FAM193BQ96PV7 902 aaPredicted RBP15.76■□□□□ 0.11
HIPK3-201ENST00000303296 DNM1Q05193 864 aaKnown RBP15.76■□□□□ 0.11
HIPK3-201ENST00000303296 SLC9C2Q5TAH2 1124 aa15.76■□□□□ 0.11
HIPK3-201ENST00000303296 RSBN1LQ6PCB5 846 aaPredicted RBP15.76■□□□□ 0.11
HIPK3-201ENST00000303296 NSFL1CQ9UNZ2 370 aaKnown RBP15.76■□□□□ 0.11
HIPK3-201ENST00000303296 ARHGEF35A5YM69 484 aa15.76■□□□□ 0.11
HIPK3-201ENST00000303296 NCAPH2Q6IBW4 605 aa15.76■□□□□ 0.11
HIPK3-201ENST00000303296 WDR48Q8TAF3 677 aa15.76■□□□□ 0.11
HIPK3-201ENST00000303296 ABTB1Q969K4 478 aaPredicted RBP15.76■□□□□ 0.11
HIPK3-201ENST00000303296 ALKBH8Q96BT7 664 aaKnown RBP15.76■□□□□ 0.11
HIPK3-201ENST00000303296 CCDC138Q96M89 665 aa15.76■□□□□ 0.11
HIPK3-201ENST00000303296 GCNT3O95395 438 aa15.76■□□□□ 0.11
HIPK3-201ENST00000303296 GCKP35557 465 aa15.76■□□□□ 0.11
HIPK3-201ENST00000303296 IRX4P78413 519 aa15.76■□□□□ 0.11
HIPK3-201ENST00000303296 LRMPQ12912 555 aa15.76■□□□□ 0.11
HIPK3-201ENST00000303296 ZBTB17Q13105 803 aa15.76■□□□□ 0.11
HIPK3-201ENST00000303296 UVSSAQ2YD98 709 aa15.76■□□□□ 0.11
HIPK3-201ENST00000303296 EAPPQ56P03 285 aaPredicted RBP15.76■□□□□ 0.11
HIPK3-201ENST00000303296 HMG20BQ9P0W2 317 aa15.76■□□□□ 0.11
HIPK3-201ENST00000303296 CTTNBP2NLQ9P2B4 639 aa15.76■□□□□ 0.11
HIPK3-201ENST00000303296 DBF4Q9UBU7 674 aaPredicted RBP15.76■□□□□ 0.11
HIPK3-201ENST00000303296 GTPBP10A4D1E9 387 aaKnown RBP15.75■□□□□ 0.11
HIPK3-201ENST00000303296 AKR1B15C9JRZ8 316 aaPredicted RBP15.75■□□□□ 0.11
HIPK3-201ENST00000303296 PARP1P09874 1014 aaKnown RBP15.75■□□□□ 0.11
HIPK3-201ENST00000303296 GNA11P29992 359 aa15.75■□□□□ 0.11
HIPK3-201ENST00000303296 IQCB1Q15051 598 aa15.75■□□□□ 0.11
HIPK3-201ENST00000303296 TMEM259Q4ZIN3 620 aa15.75■□□□□ 0.11
HIPK3-201ENST00000303296 CCDC13Q8IYE1 715 aa15.75■□□□□ 0.11
HIPK3-201ENST00000303296 ATP6V1E2Q96A05 226 aa15.75■□□□□ 0.11
HIPK3-201ENST00000303296 NBPF3Q9H094 633 aa15.75■□□□□ 0.11
HIPK3-201ENST00000303296 EVCP57679 992 aa15.75■□□□□ 0.11
HIPK3-201ENST00000303296 TBC1D9Q6ZT07 1266 aa15.75■□□□□ 0.11
HIPK3-201ENST00000303296 MMS19Q96T76 1030 aa15.75■□□□□ 0.11
HIPK3-201ENST00000303296 TFCP2L1Q9NZI6 479 aa15.75■□□□□ 0.11
HIPK3-201ENST00000303296 CEP104O60308 925 aa15.75■□□□□ 0.11
HIPK3-201ENST00000303296 TTC4O95801 387 aa15.75■□□□□ 0.11
HIPK3-201ENST00000303296 RASSF2P50749 326 aa15.75■□□□□ 0.11
HIPK3-201ENST00000303296 PDE4DQ08499 809 aa15.75■□□□□ 0.11
HIPK3-201ENST00000303296 IFT20Q8IY31 132 aa15.75■□□□□ 0.11
HIPK3-201ENST00000303296 RDH13Q8NBN7 331 aa15.75■□□□□ 0.11
HIPK3-201ENST00000303296 LMCD1Q9NZU5 365 aa15.75■□□□□ 0.11
HIPK3-201ENST00000303296 NIP7Q9Y221 180 aaKnown RBP eCLIP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms