RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 MYH1P12882 1939 aa8.11□□□□□ -1.11
ITGB1-201ENST00000302278 TMEM265A0A087WTH1 108 aa8.11□□□□□ -1.11
ITGB1-201ENST00000302278 LDHBP07195 334 aaKnown RBP8.11□□□□□ -1.11
ITGB1-201ENST00000302278 C7orf61Q8IZ16 206 aa8.11□□□□□ -1.11
ITGB1-201ENST00000302278 MRPL50Q8N5N7 158 aaKnown RBP8.11□□□□□ -1.11
ITGB1-201ENST00000302278 TRIB2Q92519 343 aa8.11□□□□□ -1.11
ITGB1-201ENST00000302278 USP44Q9H0E7 712 aa8.11□□□□□ -1.11
ITGB1-201ENST00000302278 MROH7-TTC4A0A0A0MT08 1334 aa8.11□□□□□ -1.11
ITGB1-201ENST00000302278 MYO5AQ9Y4I1 1855 aaKnown RBP8.11□□□□□ -1.11
ITGB1-201ENST00000302278 DDX4Q9NQI0 724 aaKnown RBP8.11□□□□□ -1.11
ITGB1-201ENST00000302278 BIN2Q9UBW5 565 aaPredicted RBP8.11□□□□□ -1.11
ITGB1-201ENST00000302278 ROBO3Q96MS0 1386 aa8.1□□□□□ -1.11
ITGB1-201ENST00000302278 DDTLA6NHG4 134 aaPredicted RBP8.1□□□□□ -1.11
ITGB1-201ENST00000302278 DIXDC1Q155Q3 683 aa8.1□□□□□ -1.11
ITGB1-201ENST00000302278 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.1□□□□□ -1.11
ITGB1-201ENST00000302278 SLF2Q8IX21 1173 aa8.1□□□□□ -1.11
ITGB1-201ENST00000302278 LBX2Q6XYB7 198 aa8.1□□□□□ -1.11
ITGB1-201ENST00000302278 IQSEC3Q9UPP2 1182 aaPredicted RBP8.1□□□□□ -1.11
ITGB1-201ENST00000302278 SNX17Q15036 470 aa8.1□□□□□ -1.11
ITGB1-201ENST00000302278 C1orf53Q5VUE5 145 aa8.1□□□□□ -1.11
ITGB1-201ENST00000302278 GADL1Q6ZQY3 521 aa8.1□□□□□ -1.11
ITGB1-201ENST00000302278 ZNF280CQ8ND82 737 aa8.1□□□□□ -1.11
ITGB1-201ENST00000302278 NAV1Q8NEY1 1877 aa8.09□□□□□ -1.11
ITGB1-201ENST00000302278 ANKRD13CQ8N6S4 541 aa8.09□□□□□ -1.11
ITGB1-201ENST00000302278 ZNF384Q8TF68 577 aa8.09□□□□□ -1.11
ITGB1-201ENST00000302278 GNL3LQ9NVN8 582 aaKnown RBP8.09□□□□□ -1.11
ITGB1-201ENST00000302278 HERC5Q9UII4 1024 aaKnown RBP8.09□□□□□ -1.11
ITGB1-201ENST00000302278 TCP10Q12799 353 aa8.09□□□□□ -1.11
ITGB1-201ENST00000302278 CCDC184Q52MB2 194 aa8.09□□□□□ -1.11
ITGB1-201ENST00000302278 Q7L0L9 218 aa8.09□□□□□ -1.11
ITGB1-201ENST00000302278 C12orf42Q96LP6 360 aa8.09□□□□□ -1.11
ITGB1-201ENST00000302278 ASCC2Q9H1I8 757 aaPredicted RBP8.09□□□□□ -1.11
ITGB1-201ENST00000302278 PLXNA1Q9UIW2 1896 aa8.09□□□□□ -1.11
ITGB1-201ENST00000302278 MAPK4P31152 587 aa8.09□□□□□ -1.11
ITGB1-201ENST00000302278 CAP2P40123 477 aa8.09□□□□□ -1.11
ITGB1-201ENST00000302278 SMCR8Q8TEV9 937 aaPredicted RBP8.09□□□□□ -1.11
ITGB1-201ENST00000302278 UBE2OQ9C0C9 1292 aaKnown RBP8.09□□□□□ -1.11
ITGB1-201ENST00000302278 PRDM6Q9NQX0 595 aa8.09□□□□□ -1.11
ITGB1-201ENST00000302278 HOXC6P09630 235 aa8.08□□□□□ -1.12
ITGB1-201ENST00000302278 TRIM32Q13049 653 aa8.08□□□□□ -1.12
ITGB1-201ENST00000302278 LRRC26Q2I0M4 334 aa8.08□□□□□ -1.12
ITGB1-201ENST00000302278 SPTY2D1Q68D10 685 aaPredicted RBP8.08□□□□□ -1.12
ITGB1-201ENST00000302278 COPRSQ9NQ92 184 aa8.08□□□□□ -1.12
ITGB1-201ENST00000302278 CEP290O15078 2479 aa8.08□□□□□ -1.12
ITGB1-201ENST00000302278 FRAT2O75474 233 aaPredicted RBP8.08□□□□□ -1.12
ITGB1-201ENST00000302278 SMAD3P84022 425 aaKnown RBP8.08□□□□□ -1.12
ITGB1-201ENST00000302278 ATP2B3Q16720 1220 aa8.08□□□□□ -1.12
ITGB1-201ENST00000302278 AS3MTQ9HBK9 375 aa8.08□□□□□ -1.12
ITGB1-201ENST00000302278 LRRFIP2Q9Y608 721 aaKnown RBP8.08□□□□□ -1.12
ITGB1-201ENST00000302278 C19orf81C9J6K1 198 aa8.08□□□□□ -1.12
ITGB1-201ENST00000302278 IL15P40933 162 aaPredicted RBP8.08□□□□□ -1.12
ITGB1-201ENST00000302278 POTEEQ6S8J3 1075 aa8.08□□□□□ -1.12
ITGB1-201ENST00000302278 APBA2Q99767 749 aa8.08□□□□□ -1.12
ITGB1-201ENST00000302278 USP17L5A8MUK1 530 aa8.07□□□□□ -1.12
ITGB1-201ENST00000302278 CACNB2Q08289 660 aaPredicted RBP8.07□□□□□ -1.12
ITGB1-201ENST00000302278 MTX1Q13505 466 aa8.07□□□□□ -1.12
ITGB1-201ENST00000302278 RRP1BQ14684 758 aaKnown RBP8.07□□□□□ -1.12
ITGB1-201ENST00000302278 ZMYND8Q9ULU4 1186 aaPredicted RBP8.07□□□□□ -1.12
ITGB1-201ENST00000302278 GREB1LQ9C091 1923 aaPredicted RBP8.07□□□□□ -1.12
ITGB1-201ENST00000302278 ARID4AP29374 1257 aaPredicted RBP8.07□□□□□ -1.12
ITGB1-201ENST00000302278 BTDP43251 543 aa8.07□□□□□ -1.12
ITGB1-201ENST00000302278 ALDH1L2Q3SY69 923 aa8.07□□□□□ -1.12
ITGB1-201ENST00000302278 KLHDC4Q8TBB5 520 aa8.07□□□□□ -1.12
ITGB1-201ENST00000302278 LAMA3Q16787 3333 aa8.07□□□□□ -1.12
ITGB1-201ENST00000302278 MSCO60682 206 aa8.07□□□□□ -1.12
ITGB1-201ENST00000302278 PRKAR2AP13861 404 aaKnown RBP8.07□□□□□ -1.12
ITGB1-201ENST00000302278 PHKA1P46020 1223 aa8.07□□□□□ -1.12
ITGB1-201ENST00000302278 RASGRF1Q13972 1273 aa8.07□□□□□ -1.12
ITGB1-201ENST00000302278 CCDC102BQ68D86 513 aa8.07□□□□□ -1.12
ITGB1-201ENST00000302278 NUDT12Q9BQG2 462 aa8.07□□□□□ -1.12
ITGB1-201ENST00000302278 TRIM75PA6NK02 468 aa8.06□□□□□ -1.12
ITGB1-201ENST00000302278 DNM1LO00429 736 aa8.06□□□□□ -1.12
ITGB1-201ENST00000302278 CNMDO75829 334 aa8.06□□□□□ -1.12
ITGB1-201ENST00000302278 RGS2P41220 211 aa8.06□□□□□ -1.12
ITGB1-201ENST00000302278 BACE1P56817 501 aa8.06□□□□□ -1.12
ITGB1-201ENST00000302278 RBPJLQ9UBG7 517 aa8.06□□□□□ -1.12
ITGB1-201ENST00000302278 MYH8P13535 1937 aa8.06□□□□□ -1.12
ITGB1-201ENST00000302278 TMED8Q6PL24 325 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-201ENST00000302278 GPRC5AQ8NFJ5 357 aa8.06□□□□□ -1.12
ITGB1-201ENST00000302278 NSUN4Q96CB9 384 aaKnown RBP8.06□□□□□ -1.12
ITGB1-201ENST00000302278 DHX36Q9H2U1 1008 aaKnown RBP8.06□□□□□ -1.12
ITGB1-201ENST00000302278 ZNFX1Q9P2E3 1918 aaKnown RBP8.06□□□□□ -1.12
ITGB1-201ENST00000302278 COL11A1P12107 1806 aaPredicted RBP8.05□□□□□ -1.12
ITGB1-201ENST00000302278 PPP4CP60510 307 aa8.05□□□□□ -1.12
ITGB1-201ENST00000302278 GSTO1P78417 241 aa8.05□□□□□ -1.12
ITGB1-201ENST00000302278 MECOMQ03112 1051 aa8.05□□□□□ -1.12
ITGB1-201ENST00000302278 LPAR1Q92633 364 aa8.05□□□□□ -1.12
ITGB1-201ENST00000302278 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.05□□□□□ -1.12
ITGB1-201ENST00000302278 TXNRD2Q9NNW7 524 aa8.05□□□□□ -1.12
ITGB1-201ENST00000302278 UNC80Q8N2C7 3258 aa8.05□□□□□ -1.12
ITGB1-201ENST00000302278 LRRC37A2A6NM11 1700 aa8.05□□□□□ -1.12
ITGB1-201ENST00000302278 ZKSCAN1P17029 563 aaPredicted RBP8.05□□□□□ -1.12
ITGB1-201ENST00000302278 HERVK_113P62684 666 aa8.05□□□□□ -1.12
ITGB1-201ENST00000302278 GPR142Q7Z601 462 aa8.05□□□□□ -1.12
ITGB1-201ENST00000302278 TAOK2Q9UL54 1235 aa8.05□□□□□ -1.12
ITGB1-201ENST00000302278 GBF1Q92538 1859 aa8.05□□□□□ -1.12
ITGB1-201ENST00000302278 ERVK-9P63128 1117 aa8.05□□□□□ -1.12
ITGB1-201ENST00000302278 ERVK-24P63145 666 aa8.05□□□□□ -1.12
ITGB1-201ENST00000302278 OLFML2BQ68BL8 750 aa8.05□□□□□ -1.12
ITGB1-201ENST00000302278 SLC4A10Q6U841 1118 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms