RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 NBPF12Q5TAG4 269 aaPredicted RBP10.54□□□□□ -0.72
VPREB1-201ENST00000302273 CST9Q5W186 159 aa10.54□□□□□ -0.72
VPREB1-201ENST00000302273 SH3BP5LQ7L8J4 393 aa10.54□□□□□ -0.72
VPREB1-201ENST00000302273 REM2Q8IYK8 340 aaPredicted RBP10.54□□□□□ -0.72
VPREB1-201ENST00000302273 CRACR2BQ8N4Y2 399 aaPredicted RBP10.54□□□□□ -0.72
VPREB1-201ENST00000302273 IL27Q8NEV9 243 aa10.54□□□□□ -0.72
VPREB1-201ENST00000302273 CCDC102AQ96A19 550 aa10.54□□□□□ -0.72
VPREB1-201ENST00000302273 TRIM34Q9BYJ4 488 aa10.54□□□□□ -0.72
VPREB1-201ENST00000302273 RNF41Q9H4P4 317 aaPredicted RBP10.54□□□□□ -0.72
VPREB1-201ENST00000302273 PALD1Q9ULE6 856 aa10.54□□□□□ -0.72
VPREB1-201ENST00000302273 TRAF5O00463 557 aa10.53□□□□□ -0.72
VPREB1-201ENST00000302273 ZNF213O14771 459 aa10.53□□□□□ -0.72
VPREB1-201ENST00000302273 PRKAB2O43741 272 aa10.53□□□□□ -0.72
VPREB1-201ENST00000302273 USP2O75604 605 aaPredicted RBP10.53□□□□□ -0.72
VPREB1-201ENST00000302273 CHGBP05060 677 aa10.53□□□□□ -0.72
VPREB1-201ENST00000302273 MAP3K9P80192 1104 aa10.53□□□□□ -0.72
VPREB1-201ENST00000302273 HTRA3P83110 453 aa10.53□□□□□ -0.72
VPREB1-201ENST00000302273 IMMTQ16891 758 aaKnown RBP10.53□□□□□ -0.72
VPREB1-201ENST00000302273 SLFNL1Q499Z3 407 aa10.53□□□□□ -0.72
VPREB1-201ENST00000302273 NOL9Q5SY16 702 aaKnown RBP10.53□□□□□ -0.72
VPREB1-201ENST00000302273 RNF20Q5VTR2 975 aa10.53□□□□□ -0.72
VPREB1-201ENST00000302273 SAPCD2Q86UD0 394 aa10.53□□□□□ -0.72
VPREB1-201ENST00000302273 ZNF589Q86UQ0 364 aaPredicted RBP10.53□□□□□ -0.72
VPREB1-201ENST00000302273 ZFPM1Q8IX07 1006 aa10.53□□□□□ -0.72
VPREB1-201ENST00000302273 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.53□□□□□ -0.72
VPREB1-201ENST00000302273 TLL2Q9Y6L7 1015 aa10.53□□□□□ -0.72
VPREB1-201ENST00000302273 ROBO3Q96MS0 1386 aa10.52□□□□□ -0.72
VPREB1-201ENST00000302273 PHF20L1A8MW92 1017 aa10.52□□□□□ -0.73
VPREB1-201ENST00000302273 FOXP2O15409 715 aa10.52□□□□□ -0.73
VPREB1-201ENST00000302273 ASNSP08243 561 aa10.52□□□□□ -0.73
VPREB1-201ENST00000302273 PLCD1P51178 756 aa10.52□□□□□ -0.73
VPREB1-201ENST00000302273 PPARAQ07869 468 aa10.52□□□□□ -0.73
VPREB1-201ENST00000302273 C16orf86Q6ZW13 317 aa10.52□□□□□ -0.73
VPREB1-201ENST00000302273 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.52□□□□□ -0.73
VPREB1-201ENST00000302273 SYNPO2Q9UMS6 1093 aa10.52□□□□□ -0.73
VPREB1-201ENST00000302273 CSADQ9Y600 493 aa10.52□□□□□ -0.73
VPREB1-201ENST00000302273 MYH2Q9UKX2 1941 aa10.52□□□□□ -0.73
VPREB1-201ENST00000302273 RASSF10A6NK89 507 aa10.51□□□□□ -0.73
VPREB1-201ENST00000302273 CAP2P40123 477 aa10.51□□□□□ -0.73
VPREB1-201ENST00000302273 ECE1P42892 770 aa10.51□□□□□ -0.73
VPREB1-201ENST00000302273 INHBEP58166 350 aa10.51□□□□□ -0.73
VPREB1-201ENST00000302273 TTLL12Q14166 644 aaPredicted RBP10.51□□□□□ -0.73
VPREB1-201ENST00000302273 TSGA10IPQ3SY00 556 aa10.51□□□□□ -0.73
VPREB1-201ENST00000302273 SKAP1Q86WV1 359 aa10.51□□□□□ -0.73
VPREB1-201ENST00000302273 MTA3Q9BTC8 594 aa10.51□□□□□ -0.73
VPREB1-201ENST00000302273 CNNM2Q9H8M5 875 aa10.51□□□□□ -0.73
VPREB1-201ENST00000302273 EPB41L4AQ9HCS5 686 aaPredicted RBP10.51□□□□□ -0.73
VPREB1-201ENST00000302273 ANGEL1Q9UNK9 670 aaKnown RBP10.51□□□□□ -0.73
VPREB1-201ENST00000302273 ORC4O43929 436 aa10.5□□□□□ -0.73
VPREB1-201ENST00000302273 ZBTB48P10074 688 aaPredicted RBP10.5□□□□□ -0.73
VPREB1-201ENST00000302273 ZKSCAN1P17029 563 aaPredicted RBP10.5□□□□□ -0.73
VPREB1-201ENST00000302273 PPATQ06203 517 aa10.5□□□□□ -0.73
VPREB1-201ENST00000302273 KRT32Q14532 448 aa10.5□□□□□ -0.73
VPREB1-201ENST00000302273 NECTIN1Q15223 517 aa10.5□□□□□ -0.73
VPREB1-201ENST00000302273 CERKLQ49MI3 558 aaPredicted RBP10.5□□□□□ -0.73
VPREB1-201ENST00000302273 CCDC178Q5BJE1 867 aa10.5□□□□□ -0.73
VPREB1-201ENST00000302273 VPS53Q5VIR6 699 aa10.5□□□□□ -0.73
VPREB1-201ENST00000302273 PRAMEF18Q5VWM3 479 aa10.5□□□□□ -0.73
VPREB1-201ENST00000302273 CCDC129Q6ZRS4 1044 aa10.5□□□□□ -0.73
VPREB1-201ENST00000302273 MFSD6Q6ZSS7 791 aa10.5□□□□□ -0.73
VPREB1-201ENST00000302273 MIGA2Q7L4E1 593 aa10.5□□□□□ -0.73
VPREB1-201ENST00000302273 ERO1BQ86YB8 467 aa10.5□□□□□ -0.73
VPREB1-201ENST00000302273 SCYL3Q8IZE3 742 aa10.5□□□□□ -0.73
VPREB1-201ENST00000302273 ZNF444Q8N0Y2 327 aaPredicted RBP10.5□□□□□ -0.73
VPREB1-201ENST00000302273 STAG1Q8WVM7 1258 aa10.5□□□□□ -0.73
VPREB1-201ENST00000302273 SLC10A4Q96EP9 437 aa10.5□□□□□ -0.73
VPREB1-201ENST00000302273 WRNIP1Q96S55 665 aa10.5□□□□□ -0.73
VPREB1-201ENST00000302273 KRT23Q9C075 422 aa10.5□□□□□ -0.73
VPREB1-201ENST00000302273 LSG1Q9H089 658 aaKnown RBP10.5□□□□□ -0.73
VPREB1-201ENST00000302273 ZNF408Q9H9D4 720 aa10.5□□□□□ -0.73
VPREB1-201ENST00000302273 MKNK2Q9HBH9 465 aa10.5□□□□□ -0.73
VPREB1-201ENST00000302273 CABP5Q9NP86 173 aa10.5□□□□□ -0.73
VPREB1-201ENST00000302273 ANO2Q9NQ90 1003 aa10.5□□□□□ -0.73
VPREB1-201ENST00000302273 SAP30BPQ9UHR5 308 aaKnown RBP10.5□□□□□ -0.73
VPREB1-201ENST00000302273 ECM29Q5VYK3 1845 aa10.49□□□□□ -0.73
VPREB1-201ENST00000302273 SPDYE5A6NIY4 337 aa10.49□□□□□ -0.73
VPREB1-201ENST00000302273 MINDY4BA8MYZ0 360 aa10.49□□□□□ -0.73
VPREB1-201ENST00000302273 CDK8P49336 464 aa10.49□□□□□ -0.73
VPREB1-201ENST00000302273 HUNKP57058 714 aa10.49□□□□□ -0.73
VPREB1-201ENST00000302273 TRDNQ13061 729 aa10.49□□□□□ -0.73
VPREB1-201ENST00000302273 DEFB115Q30KQ5 88 aa10.49□□□□□ -0.73
VPREB1-201ENST00000302273 AKNAD1Q5T1N1 836 aa10.49□□□□□ -0.73
VPREB1-201ENST00000302273 RGMBQ6NW40 437 aa10.49□□□□□ -0.73
VPREB1-201ENST00000302273 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.49□□□□□ -0.73
VPREB1-201ENST00000302273 TMEM179Q6ZVK1 233 aa10.49□□□□□ -0.73
VPREB1-201ENST00000302273 JMYQ8N9B5 988 aa10.49□□□□□ -0.73
VPREB1-201ENST00000302273 ESR2Q92731 530 aa10.49□□□□□ -0.73
VPREB1-201ENST00000302273 TTC14Q96N46 770 aa10.49□□□□□ -0.73
VPREB1-201ENST00000302273 WDR18Q9BV38 432 aa10.49□□□□□ -0.73
VPREB1-201ENST00000302273 KANSL2Q9H9L4 492 aa10.49□□□□□ -0.73
VPREB1-201ENST00000302273 AS3MTQ9HBK9 375 aa10.49□□□□□ -0.73
VPREB1-201ENST00000302273 PICK1Q9NRD5 415 aa10.49□□□□□ -0.73
VPREB1-201ENST00000302273 TCP11L1Q9NUJ3 509 aa10.49□□□□□ -0.73
VPREB1-201ENST00000302273 ABT1Q9ULW3 272 aaKnown RBP10.49□□□□□ -0.73
VPREB1-201ENST00000302273 C19orf81C9J6K1 198 aa10.48□□□□□ -0.73
VPREB1-201ENST00000302273 CXCL11O14625 94 aa10.48□□□□□ -0.73
VPREB1-201ENST00000302273 HMGB1P09429 215 aaKnown RBP10.48□□□□□ -0.73
VPREB1-201ENST00000302273 MCCP23508 829 aa10.48□□□□□ -0.73
VPREB1-201ENST00000302273 SHMT1P34896 483 aa10.48□□□□□ -0.73
VPREB1-201ENST00000302273 HSPA4P34932 840 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms