RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 COPRSQ9NQ92 184 aa12.46□□□□□ -0.41
SNX20-201ENST00000300590 SEC31BQ9NQW1 1179 aa12.46□□□□□ -0.41
SNX20-201ENST00000300590 HELLSQ9NRZ9 838 aa12.46□□□□□ -0.41
SNX20-201ENST00000300590 FAM169AQ9Y6X4 670 aa12.46□□□□□ -0.41
SNX20-201ENST00000300590 CRYBG1Q9Y4K1 1723 aa12.46□□□□□ -0.41
SNX20-201ENST00000300590 METAP2P50579 478 aaKnown RBP eCLIP12.46□□□□□ -0.42
SNX20-201ENST00000300590 PTPAQ15257 358 aa12.46□□□□□ -0.42
SNX20-201ENST00000300590 VPS16Q9H269 839 aa12.46□□□□□ -0.42
SNX20-201ENST00000300590 SENP2Q9HC62 589 aa12.46□□□□□ -0.42
SNX20-201ENST00000300590 DDX21Q9NR30 783 aaKnown RBP eCLIP12.46□□□□□ -0.42
SNX20-201ENST00000300590 KCNG1Q9UIX4 513 aa12.46□□□□□ -0.42
SNX20-201ENST00000300590 MON2Q7Z3U7 1717 aa12.46□□□□□ -0.42
SNX20-201ENST00000300590 RNF113AO15541 343 aaKnown RBP12.45□□□□□ -0.42
SNX20-201ENST00000300590 RNMTO43148 476 aaKnown RBP12.45□□□□□ -0.42
SNX20-201ENST00000300590 HDGFP51858 240 aaKnown RBP12.45□□□□□ -0.42
SNX20-201ENST00000300590 KCNJ14Q9UNX9 436 aa12.45□□□□□ -0.42
SNX20-201ENST00000300590 BTBD18B2RXH4 712 aa12.45□□□□□ -0.42
SNX20-201ENST00000300590 ZNF18P17022 549 aa12.45□□□□□ -0.42
SNX20-201ENST00000300590 HNRNPH1P31943 449 aaKnown RBP12.45□□□□□ -0.42
SNX20-201ENST00000300590 ARHGEF25Q86VW2 580 aa12.45□□□□□ -0.42
SNX20-201ENST00000300590 KRI1Q8N9T8 703 aaKnown RBP12.45□□□□□ -0.42
SNX20-201ENST00000300590 CAGE1Q8TC20 777 aa12.45□□□□□ -0.42
SNX20-201ENST00000300590 SH3TC1Q8TE82 1336 aa12.45□□□□□ -0.42
SNX20-201ENST00000300590 EIF5P55010 431 aaKnown RBP12.45□□□□□ -0.42
SNX20-201ENST00000300590 ANTXR2P58335 489 aa12.45□□□□□ -0.42
SNX20-201ENST00000300590 ENOX1Q8TC92 643 aaKnown RBP12.45□□□□□ -0.42
SNX20-201ENST00000300590 SLC26A6Q9BXS9 759 aa12.45□□□□□ -0.42
SNX20-201ENST00000300590 CACNA1FO60840 1977 aa12.45□□□□□ -0.42
SNX20-201ENST00000300590 ZNF213O14771 459 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 CMTR1Q8N1G2 835 aaKnown RBP12.44□□□□□ -0.42
SNX20-201ENST00000300590 MLKLQ8NB16 471 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 NCOA7Q8NI08 942 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 FAM76AQ8TAV0 307 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 ZNF622Q969S3 477 aaKnown RBP eCLIP12.44□□□□□ -0.42
SNX20-201ENST00000300590 RBM33Q96EV2 1170 aaKnown RBP12.44□□□□□ -0.42
SNX20-201ENST00000300590 MMS19Q96T76 1030 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 INCENPQ9NQS7 918 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 ITSN1Q15811 1721 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 DIP2CQ9Y2E4 1556 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 GOLGA6CA6NDK9 693 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 N4BP3O15049 544 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 PPP6R2O75170 966 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 GOLGA6DP0CG33 693 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 MATR3P43243 847 aaKnown RBP eCLIP12.44□□□□□ -0.42
SNX20-201ENST00000300590 RFX5P48382 616 aaPredicted RBP12.44□□□□□ -0.42
SNX20-201ENST00000300590 FILIP1LQ4L180 1135 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 ANKRD13DQ6ZTN6 518 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 NKX2-3Q8TAU0 364 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 PANX2Q96RD6 677 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 JPH2Q9BR39 696 aaPredicted RBP12.44□□□□□ -0.42
SNX20-201ENST00000300590 GOLGA6AQ9NYA3 693 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 HPCAL4Q9UM19 191 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 CEMIPQ8WUJ3 1361 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 RNF225M0QZC1 329 aaPredicted RBP12.44□□□□□ -0.42
SNX20-201ENST00000300590 TDO2P48775 406 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 AKAP4Q5JQC9 854 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 ANKRD24Q8TF21 1146 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 DACH1Q9UI36 760 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 CEP83Q9Y592 693 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 CAPN7Q9Y6W3 813 aa12.44□□□□□ -0.42
SNX20-201ENST00000300590 RGPD1P0DJD0 1748 aa12.43□□□□□ -0.42
SNX20-201ENST00000300590 MFAP3LO75121 409 aa12.43□□□□□ -0.42
SNX20-201ENST00000300590 MYBL2P10244 700 aa12.43□□□□□ -0.42
SNX20-201ENST00000300590 INPP5BP32019 993 aa12.43□□□□□ -0.42
SNX20-201ENST00000300590 IARSP41252 1262 aaKnown RBP12.43□□□□□ -0.42
SNX20-201ENST00000300590 WHAMMP3Q1A5X7 153 aa12.43□□□□□ -0.42
SNX20-201ENST00000300590 LRRC24Q50LG9 513 aa12.43□□□□□ -0.42
SNX20-201ENST00000300590 CPLX2Q6PUV4 134 aaKnown RBP12.43□□□□□ -0.42
SNX20-201ENST00000300590 PI16Q6UXB8 463 aa12.43□□□□□ -0.42
SNX20-201ENST00000300590 MAP3K14Q99558 947 aa12.43□□□□□ -0.42
SNX20-201ENST00000300590 CHP1Q99653 195 aa12.43□□□□□ -0.42
SNX20-201ENST00000300590 CENPHQ9H3R5 247 aa12.43□□□□□ -0.42
SNX20-201ENST00000300590 MAPK8IP1Q9UQF2 711 aa12.43□□□□□ -0.42
SNX20-201ENST00000300590 AMOTL2Q9Y2J4 779 aa12.43□□□□□ -0.42
SNX20-201ENST00000300590 PALLDQ8WX93 1383 aa12.43□□□□□ -0.42
SNX20-201ENST00000300590 SPATA31D1Q6ZQQ2 1576 aa12.43□□□□□ -0.42
SNX20-201ENST00000300590 CCDC172P0C7W6 258 aa12.43□□□□□ -0.42
SNX20-201ENST00000300590 IRAK1P51617 712 aa12.43□□□□□ -0.42
SNX20-201ENST00000300590 ERVK-24P63145 666 aa12.43□□□□□ -0.42
SNX20-201ENST00000300590 GNGT1P63211 74 aa12.43□□□□□ -0.42
SNX20-201ENST00000300590 RASGRP2Q7LDG7 609 aa12.43□□□□□ -0.42
SNX20-201ENST00000300590 A0A1B0GTH6 734 aa12.42□□□□□ -0.42
SNX20-201ENST00000300590 ZEB2O60315 1214 aa12.42□□□□□ -0.42
SNX20-201ENST00000300590 PRPF6O94906 941 aaKnown RBP12.42□□□□□ -0.42
SNX20-201ENST00000300590 GYPCP04921 128 aa12.42□□□□□ -0.42
SNX20-201ENST00000300590 TTF2Q9UNY4 1162 aaKnown RBP12.42□□□□□ -0.42
SNX20-201ENST00000300590 CDHR2Q9BYE9 1310 aa12.42□□□□□ -0.42
SNX20-201ENST00000300590 MYO1FO00160 1098 aa12.42□□□□□ -0.42
SNX20-201ENST00000300590 ZNF185O15231 689 aa12.42□□□□□ -0.42
SNX20-201ENST00000300590 CD44P16070 742 aaKnown RBP12.42□□□□□ -0.42
SNX20-201ENST00000300590 KRT9P35527 623 aa12.42□□□□□ -0.42
SNX20-201ENST00000300590 MMP14P50281 582 aa12.42□□□□□ -0.42
SNX20-201ENST00000300590 MDM2Q00987 491 aaPredicted RBP12.42□□□□□ -0.42
SNX20-201ENST00000300590 PDIA6Q15084 440 aa12.42□□□□□ -0.42
SNX20-201ENST00000300590 GPIHBP1Q8IV16 184 aa12.42□□□□□ -0.42
SNX20-201ENST00000300590 WWC3Q9ULE0 1092 aa12.42□□□□□ -0.42
SNX20-201ENST00000300590 NCAPD2Q15021 1401 aa12.42□□□□□ -0.42
SNX20-201ENST00000300590 ABCC6O95255 1503 aa12.42□□□□□ -0.42
SNX20-201ENST00000300590 RIMBP3CA6NJZ7 1639 aa12.42□□□□□ -0.42
SNX20-201ENST00000300590 RIMBP3BA6NNM3 1639 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms