RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.06□□□□□ -0.32
SNIP1-201ENST00000296215 N4BP1O75113 896 aaKnown RBP13.06□□□□□ -0.32
SNIP1-201ENST00000296215 SERPINB4P48594 390 aa13.06□□□□□ -0.32
SNIP1-201ENST00000296215 MRPL12P52815 198 aaKnown RBP13.06□□□□□ -0.32
SNIP1-201ENST00000296215 DYDC2Q96IM9 177 aa13.06□□□□□ -0.32
SNIP1-201ENST00000296215 EID1Q9Y6B2 187 aa13.06□□□□□ -0.32
SNIP1-201ENST00000296215 IFIT2P09913 472 aaKnown RBP13.06□□□□□ -0.32
SNIP1-201ENST00000296215 EEF2P13639 858 aaKnown RBP13.06□□□□□ -0.32
SNIP1-201ENST00000296215 TBC1D8BQ0IIM8 1120 aa13.06□□□□□ -0.32
SNIP1-201ENST00000296215 CWF19L1Q69YN2 538 aaKnown RBP13.06□□□□□ -0.32
SNIP1-201ENST00000296215 BICDL1Q6ZP65 573 aa13.06□□□□□ -0.32
SNIP1-201ENST00000296215 RBM12BQ8IXT5 1001 aaKnown RBP13.06□□□□□ -0.32
SNIP1-201ENST00000296215 DESI2Q9BSY9 194 aa13.06□□□□□ -0.32
SNIP1-201ENST00000296215 SEPT11Q9NVA2 429 aaKnown RBP13.06□□□□□ -0.32
SNIP1-201ENST00000296215 PEG3Q9GZU2 1588 aa13.06□□□□□ -0.32
SNIP1-201ENST00000296215 NR1D1P20393 614 aa13.05□□□□□ -0.32
SNIP1-201ENST00000296215 BHMTQ93088 406 aa13.05□□□□□ -0.32
SNIP1-201ENST00000296215 CIB2O75838 187 aa13.05□□□□□ -0.32
SNIP1-201ENST00000296215 MYL1P05976 194 aa13.05□□□□□ -0.32
SNIP1-201ENST00000296215 PYGBP11216 843 aa13.05□□□□□ -0.32
SNIP1-201ENST00000296215 CYLC1P35663 651 aaPredicted RBP13.05□□□□□ -0.32
SNIP1-201ENST00000296215 MRPS27Q92552 414 aaKnown RBP13.05□□□□□ -0.32
SNIP1-201ENST00000296215 LRRC45Q96CN5 670 aa13.05□□□□□ -0.32
SNIP1-201ENST00000296215 GALNT8Q9NY28 637 aa13.05□□□□□ -0.32
SNIP1-201ENST00000296215 R3HDM2Q9Y2K5 976 aaKnown RBP13.05□□□□□ -0.32
SNIP1-201ENST00000296215 H3BQF6 201 aa13.05□□□□□ -0.32
SNIP1-201ENST00000296215 STK10O94804 968 aaKnown RBP13.05□□□□□ -0.32
SNIP1-201ENST00000296215 KRT83P78385 493 aa13.05□□□□□ -0.32
SNIP1-201ENST00000296215 AIMP1Q12904 312 aaKnown RBP13.05□□□□□ -0.32
SNIP1-201ENST00000296215 CCDC122Q5T0U0 273 aa13.05□□□□□ -0.32
SNIP1-201ENST00000296215 POTEEQ6S8J3 1075 aa13.05□□□□□ -0.32
SNIP1-201ENST00000296215 BRAPQ7Z569 592 aa13.05□□□□□ -0.32
SNIP1-201ENST00000296215 PHC3Q8NDX5 983 aa13.05□□□□□ -0.32
SNIP1-201ENST00000296215 XAB2Q9HCS7 855 aaKnown RBP13.05□□□□□ -0.32
SNIP1-201ENST00000296215 ZNF148Q9UQR1 794 aa13.05□□□□□ -0.32
SNIP1-201ENST00000296215 CARD8Q9Y2G2 431 aa13.05□□□□□ -0.32
SNIP1-201ENST00000296215 COQ9O75208 318 aa13.05□□□□□ -0.32
SNIP1-201ENST00000296215 IDEP14735 1019 aa13.05□□□□□ -0.32
SNIP1-201ENST00000296215 KCNA2P16389 499 aa13.05□□□□□ -0.32
SNIP1-201ENST00000296215 DDR1Q08345 913 aa13.05□□□□□ -0.32
SNIP1-201ENST00000296215 CYLC2Q14093 348 aaPredicted RBP13.05□□□□□ -0.32
SNIP1-201ENST00000296215 AFAP1Q8N556 730 aa13.05□□□□□ -0.32
SNIP1-201ENST00000296215 OLFM3Q96PB7 478 aa13.05□□□□□ -0.32
SNIP1-201ENST00000296215 CCDC144AA2RUR9 1427 aa13.04□□□□□ -0.32
SNIP1-201ENST00000296215 CFAP73A6NFT4 308 aa13.04□□□□□ -0.32
SNIP1-201ENST00000296215 ZMYND10O75800 440 aa13.04□□□□□ -0.32
SNIP1-201ENST00000296215 MYL5Q02045 173 aa13.04□□□□□ -0.32
SNIP1-201ENST00000296215 PSMD6Q15008 389 aa13.04□□□□□ -0.32
SNIP1-201ENST00000296215 CAPN12Q6ZSI9 719 aa13.04□□□□□ -0.32
SNIP1-201ENST00000296215 VPS52Q8N1B4 723 aa13.04□□□□□ -0.32
SNIP1-201ENST00000296215 DDX54Q8TDD1 881 aaKnown RBP13.04□□□□□ -0.32
SNIP1-201ENST00000296215 SUCLA2Q9P2R7 463 aaPredicted RBP13.04□□□□□ -0.32
SNIP1-201ENST00000296215 DKC1O60832 514 aaKnown RBP eCLIP13.04□□□□□ -0.32
SNIP1-201ENST00000296215 RAB11FIP3O75154 756 aa13.04□□□□□ -0.32
SNIP1-201ENST00000296215 SERPINB3P29508 390 aa13.04□□□□□ -0.32
SNIP1-201ENST00000296215 ABL2P42684 1182 aa13.04□□□□□ -0.32
SNIP1-201ENST00000296215 KIF5AQ12840 1032 aa13.04□□□□□ -0.32
SNIP1-201ENST00000296215 CCDC144BQ3MJ40 725 aa13.04□□□□□ -0.32
SNIP1-201ENST00000296215 NLRP14Q86W24 1093 aa13.04□□□□□ -0.32
SNIP1-201ENST00000296215 C8orf76Q96K31 380 aa13.04□□□□□ -0.32
SNIP1-201ENST00000296215 SAR1BQ9Y6B6 198 aa13.04□□□□□ -0.32
SNIP1-201ENST00000296215 TMEM110-MUSTN1A8MSY1 372 aa13.04□□□□□ -0.32
SNIP1-201ENST00000296215 PSMC1P62191 440 aaKnown RBP13.04□□□□□ -0.32
SNIP1-201ENST00000296215 SSH1Q8WYL5 1049 aa13.04□□□□□ -0.32
SNIP1-201ENST00000296215 VCPKMTQ9H867 229 aa13.04□□□□□ -0.32
SNIP1-201ENST00000296215 KDM1AO60341 852 aa13.03□□□□□ -0.32
SNIP1-201ENST00000296215 ADCY1Q08828 1119 aa13.03□□□□□ -0.32
SNIP1-201ENST00000296215 NMIQ13287 307 aaPredicted RBP13.03□□□□□ -0.32
SNIP1-201ENST00000296215 MTX1Q13505 466 aa13.03□□□□□ -0.32
SNIP1-201ENST00000296215 VPS53Q5VIR6 699 aa13.03□□□□□ -0.32
SNIP1-201ENST00000296215 PDE5AO76074 875 aa13.03□□□□□ -0.32
SNIP1-201ENST00000296215 KRT14P02533 472 aa13.03□□□□□ -0.32
SNIP1-201ENST00000296215 IGBP1P78318 339 aa13.03□□□□□ -0.32
SNIP1-201ENST00000296215 KCNK9Q9NPC2 374 aa13.03□□□□□ -0.32
SNIP1-201ENST00000296215 RAB27AP51159 221 aa13.03□□□□□ -0.32
SNIP1-201ENST00000296215 KRT71Q3SY84 523 aa13.03□□□□□ -0.32
SNIP1-201ENST00000296215 NECAB1Q8N987 351 aa13.03□□□□□ -0.32
SNIP1-201ENST00000296215 ZCWPW1Q9H0M4 648 aa13.03□□□□□ -0.32
SNIP1-201ENST00000296215 CARD9Q9H257 536 aa13.03□□□□□ -0.32
SNIP1-201ENST00000296215 KLHL14Q9P2G3 628 aa13.03□□□□□ -0.32
SNIP1-201ENST00000296215 SLC4A7Q9Y6M7 1214 aa13.03□□□□□ -0.32
SNIP1-201ENST00000296215 TSPAN9O75954 239 aa13.03□□□□□ -0.32
SNIP1-201ENST00000296215 CCND1P24385 295 aa13.03□□□□□ -0.32
SNIP1-201ENST00000296215 SAFB2Q14151 953 aaKnown RBP eCLIP13.03□□□□□ -0.32
SNIP1-201ENST00000296215 STAMBPL1Q96FJ0 436 aa13.03□□□□□ -0.32
SNIP1-201ENST00000296215 RBM41Q96IZ5 413 aaKnown RBP13.03□□□□□ -0.32
SNIP1-201ENST00000296215 SH2D4AQ9H788 454 aa13.03□□□□□ -0.32
SNIP1-201ENST00000296215 GCLCP48506 637 aaPredicted RBP13.02□□□□□ -0.32
SNIP1-201ENST00000296215 RAD23BP54727 409 aa13.02□□□□□ -0.32
SNIP1-201ENST00000296215 CNGA4Q8IV77 575 aa13.02□□□□□ -0.32
SNIP1-201ENST00000296215 RANBP17Q9H2T7 1088 aaKnown RBP13.02□□□□□ -0.32
SNIP1-201ENST00000296215 PLCB1Q9NQ66 1216 aa13.02□□□□□ -0.32
SNIP1-201ENST00000296215 A0A1W2PRG0 241 aa13.02□□□□□ -0.33
SNIP1-201ENST00000296215 BLVRAP53004 296 aa13.02□□□□□ -0.33
SNIP1-201ENST00000296215 TRIM50Q86XT4 487 aa13.02□□□□□ -0.33
SNIP1-201ENST00000296215 ARHGAP24Q8N264 748 aa13.02□□□□□ -0.33
SNIP1-201ENST00000296215 WDR60Q8WVS4 1066 aa13.02□□□□□ -0.33
SNIP1-201ENST00000296215 HINFPQ9BQA5 517 aa13.02□□□□□ -0.33
SNIP1-201ENST00000296215 L2HGDHQ9H9P8 463 aa13.02□□□□□ -0.33
SNIP1-201ENST00000296215 MAP3K7O43318 606 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms