RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 MCM9Q9NXL9 1143 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 MKRN1Q9UHC7 482 aaKnown RBP11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 SUGT1Q9Y2Z0 365 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 CYP46A1Q9Y6A2 500 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 NEDD4P46934 1319 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 MYH1P12882 1939 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 PRDM1O75626 825 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 SLURP2P0DP57 97 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 NFIAQ12857 509 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 ALX1Q15699 326 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 DNTTIP2Q5QJE6 756 aaKnown RBP11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 CDC42EP5Q6NZY7 148 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 BLOC1S2Q6QNY1 142 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 TEX11Q8IYF3 940 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 GMLQ99445 158 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 NOL10Q9BSC4 688 aaKnown RBP11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 DDX4Q9NQI0 724 aaKnown RBP11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 SCAF8Q9UPN6 1271 aaKnown RBP11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 ZNF541Q9H0D2 1346 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 LTBP3Q9NS15 1303 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 ECM29Q5VYK3 1845 aa11.36□□□□□ -0.59
LRTOMT-201ENST00000289488 KIF20AO95235 890 aa11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 EGFRP00533 1210 aa11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 PPARAQ07869 468 aa11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 SYAP1Q96A49 352 aaPredicted RBP11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 PRMT6Q96LA8 375 aaPredicted RBP11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 VPS33BQ9H267 617 aa11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 PDRG1Q9NUG6 133 aa11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 USP40Q9NVE5 1235 aa11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 GJA3Q9Y6H8 435 aa11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 FOCADQ5VW36 1801 aa11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 NAV1Q8NEY1 1877 aa11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 PCNTO95613 3336 aa11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 B4E1Z4 1266 aa11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 WDHD1O75717 1129 aaPredicted RBP11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 RPS6KB1P23443 525 aa11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 PLCD1P51178 756 aa11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 RRP12Q5JTH9 1297 aaKnown RBP11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 CIAPIN1Q6FI81 312 aa11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 HHIPL2Q6UWX4 724 aa11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 ZFPM1Q8IX07 1006 aa11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 SLF2Q8IX21 1173 aa11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 TM6SF1Q9BZW5 370 aa11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 FLT1P17948 1338 aa11.35□□□□□ -0.59
LRTOMT-201ENST00000289488 DICER1Q9UPY3 1922 aaKnown RBP11.34□□□□□ -0.59
LRTOMT-201ENST00000289488 LARGE1O95461 756 aa11.34□□□□□ -0.59
LRTOMT-201ENST00000289488 FKBP1AP62942 108 aaKnown RBP11.34□□□□□ -0.59
LRTOMT-201ENST00000289488 TCP10Q12799 353 aa11.34□□□□□ -0.59
LRTOMT-201ENST00000289488 CFAP100Q494V2 611 aa11.34□□□□□ -0.59
LRTOMT-201ENST00000289488 DYNLL2Q96FJ2 89 aa11.34□□□□□ -0.59
LRTOMT-201ENST00000289488 ZDHHC15Q96MV8 337 aa11.34□□□□□ -0.59
LRTOMT-201ENST00000289488 TDRD3Q9H7E2 651 aaKnown RBP11.34□□□□□ -0.59
LRTOMT-201ENST00000289488 TOMM22Q9NS69 142 aa11.34□□□□□ -0.59
LRTOMT-201ENST00000289488 ATP8A2Q9NTI2 1148 aa11.34□□□□□ -0.59
LRTOMT-201ENST00000289488 ZMYM6O95789 1325 aa11.34□□□□□ -0.59
LRTOMT-201ENST00000289488 FZD9O00144 591 aa11.34□□□□□ -0.59
LRTOMT-201ENST00000289488 LETM1O95202 739 aaPredicted RBP11.34□□□□□ -0.59
LRTOMT-201ENST00000289488 PSMA5P28066 241 aa11.34□□□□□ -0.59
LRTOMT-201ENST00000289488 TOB2Q14106 344 aaPredicted RBP11.34□□□□□ -0.59
LRTOMT-201ENST00000289488 KRT32Q14532 448 aa11.34□□□□□ -0.59
LRTOMT-201ENST00000289488 UVSSAQ2YD98 709 aa11.34□□□□□ -0.59
LRTOMT-201ENST00000289488 CYB5R4Q7L1T6 521 aa11.34□□□□□ -0.59
LRTOMT-201ENST00000289488 SLC44A5Q8NCS7 719 aa11.34□□□□□ -0.59
LRTOMT-201ENST00000289488 SERPINA10Q9UK55 444 aa11.34□□□□□ -0.59
LRTOMT-201ENST00000289488 LAMB1P07942 1786 aa11.33□□□□□ -0.6
LRTOMT-201ENST00000289488 KDM4AO75164 1064 aa11.33□□□□□ -0.6
LRTOMT-201ENST00000289488 LMNB1P20700 586 aa11.33□□□□□ -0.6
LRTOMT-201ENST00000289488 ANTXR2P58335 489 aa11.33□□□□□ -0.6
LRTOMT-201ENST00000289488 NOLC1Q14978 699 aaKnown RBP eCLIP11.33□□□□□ -0.6
LRTOMT-201ENST00000289488 AKNAD1Q5T1N1 836 aa11.33□□□□□ -0.6
LRTOMT-201ENST00000289488 Q6ZUG5 572 aa11.33□□□□□ -0.6
LRTOMT-201ENST00000289488 FAM184AQ8NB25 1140 aa11.33□□□□□ -0.6
LRTOMT-201ENST00000289488 TMX3Q96JJ7 454 aa11.33□□□□□ -0.6
LRTOMT-201ENST00000289488 ZKSCAN3Q9BRR0 538 aa11.33□□□□□ -0.6
LRTOMT-201ENST00000289488 CLRN2A0PK11 232 aa11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 BRD1O95696 1058 aa11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 EXOSC10Q01780 885 aaKnown RBP11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 GPR162Q16538 588 aa11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 RBM26Q5T8P6 1007 aaKnown RBP11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 TMED8Q6PL24 325 aaPredicted RBP11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 MFSD6Q6ZSS7 791 aa11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 DHX32Q7L7V1 743 aaKnown RBP11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 MB21D2Q8IYB1 491 aaPredicted RBP11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 OGFOD1Q8N543 542 aa11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 SENP2Q9HC62 589 aa11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 TPCN1Q9ULQ1 816 aa11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 KIF3AQ9Y496 699 aa11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 GMPSP49915 693 aaPredicted RBP11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 CBX1P83916 185 aa11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 NBPF9Q3BBW0 867 aa11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 NCOA7Q8NI08 942 aa11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 BRF1Q92994 677 aa11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 CHAMP1Q96JM3 812 aa11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 SPTLC3Q9NUV7 552 aa11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 RNF181Q9P0P0 153 aa11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 ZSWIM5Q9P217 1185 aa11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 DDX60LQ5H9U9 1706 aaKnown RBP11.32□□□□□ -0.6
LRTOMT-201ENST00000289488 MYO3BQ8WXR4 1341 aa11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 SPDYE2BA6NHP3 402 aa11.31□□□□□ -0.6
LRTOMT-201ENST00000289488 PRC1O43663 620 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms