RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 DCP1AQ9NPI6 582 aaPredicted RBP22.37■■□□□ 1.17
BRAF-201ENST00000288602 ZKSCAN5Q9Y2L8 839 aa22.37■■□□□ 1.17
BRAF-201ENST00000288602 SERPINB2P05120 415 aa22.37■■□□□ 1.17
BRAF-201ENST00000288602 UBE2Q2Q8WVN8 375 aa22.37■■□□□ 1.17
BRAF-201ENST00000288602 RPGRQ92834 1020 aaKnown RBP22.37■■□□□ 1.17
BRAF-201ENST00000288602 YEATS4O95619 227 aa22.36■■□□□ 1.17
BRAF-201ENST00000288602 DZIP1Q86YF9 867 aaKnown RBP22.36■■□□□ 1.17
BRAF-201ENST00000288602 KLHL34Q8N239 644 aa22.36■■□□□ 1.17
BRAF-201ENST00000288602 KCNG4Q8TDN1 519 aa22.36■■□□□ 1.17
BRAF-201ENST00000288602 FBXW7Q969H0 707 aa22.36■■□□□ 1.17
BRAF-201ENST00000288602 ZSCAN10Q96SZ4 725 aaPredicted RBP22.36■■□□□ 1.17
BRAF-201ENST00000288602 NMT2O60551 498 aa22.36■■□□□ 1.17
BRAF-201ENST00000288602 NBPF11Q86T75 865 aa22.36■■□□□ 1.17
BRAF-201ENST00000288602 FMR1NBQ8N0W7 255 aaPredicted RBP22.36■■□□□ 1.17
BRAF-201ENST00000288602 WDHD1O75717 1129 aaPredicted RBP22.35■■□□□ 1.17
BRAF-201ENST00000288602 GPSM2P81274 684 aa22.35■■□□□ 1.17
BRAF-201ENST00000288602 TMTC2Q8N394 836 aa22.35■■□□□ 1.17
BRAF-201ENST00000288602 CRNKL1Q9BZJ0 848 aaKnown RBP22.35■■□□□ 1.17
BRAF-201ENST00000288602 hCG_1642624A0A1W2PR95 340 aa22.35■■□□□ 1.17
BRAF-201ENST00000288602 ZNF165P49910 485 aa22.35■■□□□ 1.17
BRAF-201ENST00000288602 DIXDC1Q155Q3 683 aa22.35■■□□□ 1.17
BRAF-201ENST00000288602 FAM47AQ5JRC9 791 aa22.35■■□□□ 1.17
BRAF-201ENST00000288602 CRACR2BQ8N4Y2 399 aaPredicted RBP22.35■■□□□ 1.17
BRAF-201ENST00000288602 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.35■■□□□ 1.17
BRAF-201ENST00000288602 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.35■■□□□ 1.17
BRAF-201ENST00000288602 DUOX1Q9NRD9 1551 aa22.34■■□□□ 1.17
BRAF-201ENST00000288602 UBR3Q6ZT12 1888 aa22.34■■□□□ 1.17
BRAF-201ENST00000288602 BTBD18B2RXH4 712 aa22.34■■□□□ 1.17
BRAF-201ENST00000288602 ADRA2BP18089 450 aa22.34■■□□□ 1.17
BRAF-201ENST00000288602 PDS5AQ29RF7 1337 aaKnown RBP22.34■■□□□ 1.17
BRAF-201ENST00000288602 IFIT1BQ5T764 474 aaKnown RBP22.34■■□□□ 1.17
BRAF-201ENST00000288602 C11orf57Q6ZUT1 292 aaPredicted RBP22.34■■□□□ 1.17
BRAF-201ENST00000288602 TRIM22Q8IYM9 498 aa22.34■■□□□ 1.17
BRAF-201ENST00000288602 SPC24Q8NBT2 197 aa22.34■■□□□ 1.17
BRAF-201ENST00000288602 XDHP47989 1333 aa22.34■■□□□ 1.17
BRAF-201ENST00000288602 STK36Q9NRP7 1315 aa22.34■■□□□ 1.17
BRAF-201ENST00000288602 U2AF2P26368 475 aaKnown RBP eCLIP22.33■■□□□ 1.176e-7■■■□□ 17.3
BRAF-201ENST00000288602 AXDND1Q5T1B0 1012 aaPredicted RBP22.33■■□□□ 1.17
BRAF-201ENST00000288602 KRT27Q7Z3Y8 459 aa22.33■■□□□ 1.17
BRAF-201ENST00000288602 LEMD3Q9Y2U8 911 aa22.33■■□□□ 1.17
BRAF-201ENST00000288602 NID2Q14112 1375 aa22.33■■□□□ 1.16
BRAF-201ENST00000288602 A0A1W2PQ27 194 aa22.33■■□□□ 1.16
BRAF-201ENST00000288602 A0A1W2PQ64 194 aa22.33■■□□□ 1.16
BRAF-201ENST00000288602 A0A1W2PQD8 194 aa22.33■■□□□ 1.16
BRAF-201ENST00000288602 USP17L8P0C7I0 530 aa22.33■■□□□ 1.16
BRAF-201ENST00000288602 SDF4Q9BRK5 362 aa22.33■■□□□ 1.16
BRAF-201ENST00000288602 TTC12Q9H892 705 aaPredicted RBP22.33■■□□□ 1.16
BRAF-201ENST00000288602 MROH7-TTC4A0A0A0MT08 1334 aa22.32■■□□□ 1.16
BRAF-201ENST00000288602 LDHBP07195 334 aaKnown RBP22.32■■□□□ 1.16
BRAF-201ENST00000288602 SLC39A14Q15043 492 aa22.32■■□□□ 1.16
BRAF-201ENST00000288602 MCM9Q9NXL9 1143 aa22.32■■□□□ 1.16
BRAF-201ENST00000288602 CCDC88AQ3V6T2 1871 aa22.32■■□□□ 1.16
BRAF-201ENST00000288602 ST5P78524 1137 aa22.32■■□□□ 1.16
BRAF-201ENST00000288602 DDR1Q08345 913 aa22.32■■□□□ 1.16
BRAF-201ENST00000288602 TDRD7Q8NHU6 1098 aaKnown RBP22.32■■□□□ 1.16
BRAF-201ENST00000288602 MTA3Q9BTC8 594 aa22.32■■□□□ 1.16
BRAF-201ENST00000288602 UFL1O94874 794 aa22.31■■□□□ 1.16
BRAF-201ENST00000288602 MMP1P03956 469 aa22.31■■□□□ 1.16
BRAF-201ENST00000288602 IQCA1Q86XH1 822 aa22.31■■□□□ 1.16
BRAF-201ENST00000288602 DIS3L2Q8IYB7 885 aaKnown RBP22.31■■□□□ 1.16
BRAF-201ENST00000288602 PROM2Q8N271 834 aa22.31■■□□□ 1.16
BRAF-201ENST00000288602 CLIC6Q96NY7 704 aa22.31■■□□□ 1.16
BRAF-201ENST00000288602 MAP3K14Q99558 947 aa22.31■■□□□ 1.16
BRAF-201ENST00000288602 CCDC196A0A1B0GTZ2 297 aa22.31■■□□□ 1.16
BRAF-201ENST00000288602 CTAGE5O15320 804 aa22.31■■□□□ 1.16
BRAF-201ENST00000288602 PLEKHA8P1O95397 391 aa22.31■■□□□ 1.16
BRAF-201ENST00000288602 NR5A1Q13285 461 aa22.31■■□□□ 1.16
BRAF-201ENST00000288602 WASF1Q92558 559 aa22.31■■□□□ 1.16
BRAF-201ENST00000288602 ATP8A2Q9NTI2 1148 aa22.31■■□□□ 1.16
BRAF-201ENST00000288602 DEXIO95424 95 aa22.3■■□□□ 1.16
BRAF-201ENST00000288602 FGRP09769 529 aa22.3■■□□□ 1.16
BRAF-201ENST00000288602 PTPAQ15257 358 aa22.3■■□□□ 1.16
BRAF-201ENST00000288602 CRY2Q49AN0 593 aa22.3■■□□□ 1.16
BRAF-201ENST00000288602 SH3RF3Q8TEJ3 882 aaPredicted RBP22.3■■□□□ 1.16
BRAF-201ENST00000288602 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.3■■□□□ 1.166e-6■■■■■ 34.1
BRAF-201ENST00000288602 BRWD3Q6RI45 1802 aa22.3■■□□□ 1.16
BRAF-201ENST00000288602 PFKFB1P16118 471 aa22.3■■□□□ 1.16
BRAF-201ENST00000288602 SPTY2D1Q68D10 685 aaPredicted RBP22.3■■□□□ 1.16
BRAF-201ENST00000288602 ZNF804AQ7Z570 1209 aa22.3■■□□□ 1.16
BRAF-201ENST00000288602 NOSTRINQ8IVI9 506 aa22.3■■□□□ 1.16
BRAF-201ENST00000288602 OXER1Q8TDS5 423 aa22.3■■□□□ 1.16
BRAF-201ENST00000288602 SHISA4Q96DD7 197 aa22.3■■□□□ 1.16
BRAF-201ENST00000288602 NAP1L5Q96NT1 182 aaPredicted RBP22.3■■□□□ 1.16
BRAF-201ENST00000288602 ZNF202O95125 648 aa22.29■■□□□ 1.16
BRAF-201ENST00000288602 WDR66Q8TBY9 1149 aa22.29■■□□□ 1.16
BRAF-201ENST00000288602 SLC27A3Q5K4L6 730 aa22.29■■□□□ 1.16
BRAF-201ENST00000288602 CATIPQ7Z7H3 387 aa22.29■■□□□ 1.16
BRAF-201ENST00000288602 BAZ2BQ9UIF8 2168 aaKnown RBP22.28■■□□□ 1.16
BRAF-201ENST00000288602 USP5P45974 858 aa22.28■■□□□ 1.16
BRAF-201ENST00000288602 STX1AQ16623 288 aa22.28■■□□□ 1.16
BRAF-201ENST00000288602 RGS22Q8NE09 1264 aa22.28■■□□□ 1.16
BRAF-201ENST00000288602 DYNLL2Q96FJ2 89 aa22.28■■□□□ 1.16
BRAF-201ENST00000288602 ATP2B1P20020 1258 aa22.28■■□□□ 1.16
BRAF-201ENST00000288602 TOB1P50616 345 aaPredicted RBP22.28■■□□□ 1.16
BRAF-201ENST00000288602 TROAPQ12815 778 aa22.28■■□□□ 1.16
BRAF-201ENST00000288602 SAFBQ15424 915 aaKnown RBP eCLIP22.28■■□□□ 1.16
BRAF-201ENST00000288602 TXNRD1Q16881 649 aa22.28■■□□□ 1.16
BRAF-201ENST00000288602 SHC4Q6S5L8 630 aa22.28■■□□□ 1.16
BRAF-201ENST00000288602 RBM17Q96I25 401 aaKnown RBP22.28■■□□□ 1.16
BRAF-201ENST00000288602 VPS54Q9P1Q0 977 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms