RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 KRT5P13647 590 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 SP4Q02446 784 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 DCAF17Q5H9S7 520 aaPredicted RBP4.52□□□□□ -1.69
SCN3A-201ENST00000283254 ZKSCAN3Q9BRR0 538 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 IQSEC3Q9UPP2 1182 aaPredicted RBP4.52□□□□□ -1.69
SCN3A-201ENST00000283254 RBM8AQ9Y5S9 174 aaKnown RBP4.52□□□□□ -1.69
SCN3A-201ENST00000283254 EYA2O00167 538 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 F13A1P00488 732 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 CD19P15391 556 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 ATP8B2P98198 1209 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 ARID5AQ03989 594 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 PPP2R5AQ15172 486 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 MCUR1Q96AQ8 359 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 RPGRIP1Q96KN7 1286 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 IPO11Q9UI26 975 aaKnown RBP4.52□□□□□ -1.69
SCN3A-201ENST00000283254 GINS2Q9Y248 185 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 A2MP01023 1474 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 CCDC169A6NNP5 214 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 H7C1D1 291 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 YARSP54577 528 aaKnown RBP4.52□□□□□ -1.69
SCN3A-201ENST00000283254 SDCCAG8Q86SQ7 713 aaPredicted RBP4.52□□□□□ -1.69
SCN3A-201ENST00000283254 MAGEB6Q8N7X4 407 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 RSRC1Q96IZ7 334 aaKnown RBP4.52□□□□□ -1.69
SCN3A-201ENST00000283254 BIVM-ERCC5R4GMW8 1640 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 HARSP12081 509 aaKnown RBP4.52□□□□□ -1.69
SCN3A-201ENST00000283254 HIBADHP31937 336 aaKnown RBP4.52□□□□□ -1.69
SCN3A-201ENST00000283254 RBBP5Q15291 538 aaKnown RBP4.52□□□□□ -1.69
SCN3A-201ENST00000283254 DLGAP5Q15398 846 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 CCDC122Q5T0U0 273 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 RUFY4Q6ZNE9 571 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 PHLDB2Q86SQ0 1253 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 CNKSR1Q969H4 720 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.52□□□□□ -1.69
SCN3A-201ENST00000283254 DHX58Q96C10 678 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 RNF216Q9NWF9 866 aaPredicted RBP4.52□□□□□ -1.69
SCN3A-201ENST00000283254 GJA3Q9Y6H8 435 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 CCDC160A6NGH7 325 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 MGEA5O60502 916 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 EXOC3O60645 756 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 MYL5Q02045 173 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 SPOUT1Q5T280 376 aaKnown RBP4.52□□□□□ -1.69
SCN3A-201ENST00000283254 OTUD6AQ7L8S5 288 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 HESX1Q9UBX0 185 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 ANGEL1Q9UNK9 670 aaKnown RBP4.52□□□□□ -1.69
SCN3A-201ENST00000283254 ADGRF5Q8IZF2 1346 aa4.52□□□□□ -1.69
SCN3A-201ENST00000283254 BLMP54132 1417 aaPredicted RBP4.52□□□□□ -1.69
SCN3A-201ENST00000283254 GOLGA8QA0A0J9YX86 632 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 GOLGA8OA6NCC3 632 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 GOLGA8NF8WBI6 632 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 ATP8B3O60423 1300 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 PCF11O94913 1555 aaKnown RBP4.51□□□□□ -1.69
SCN3A-201ENST00000283254 MCM7P33993 719 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 KCTD2Q14681 263 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 KRT26Q7Z3Y9 468 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 TRIM50Q86XT4 487 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 FAM76AQ8TAV0 307 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 NUP58Q9BVL2 599 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 ARPP21Q9UBL0 812 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-201ENST00000283254 XPAP23025 273 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-201ENST00000283254 GTF2F1P35269 517 aaKnown RBP eCLIP4.51□□□□□ -1.69
SCN3A-201ENST00000283254 RBM10P98175 930 aaKnown RBP4.51□□□□□ -1.69
SCN3A-201ENST00000283254 SULF1Q8IWU6 871 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 LLPHQ9BRT6 129 aaKnown RBP4.51□□□□□ -1.69
SCN3A-201ENST00000283254 TRMT1Q9NXH9 659 aaKnown RBP4.51□□□□□ -1.69
SCN3A-201ENST00000283254 CTTNBP2NLQ9P2B4 639 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 BAG5Q9UL15 447 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 SBNO1A3KN83 1393 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 ERBB4Q15303 1308 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 GNA14O95837 355 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 IRX4P78413 519 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 NUCB1Q02818 461 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 TFDP1Q14186 410 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 AOC3Q16853 763 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 Q6ZUG5 572 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 SELENOSQ9BQE4 189 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 LRWD1Q9UFC0 647 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 ZBTB21Q9ULJ3 1066 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 GUCA1BQ9UMX6 200 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 POLR3AO14802 1390 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-201ENST00000283254 SYNRGQ9UMZ2 1314 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 MBD4O95243 580 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 OATP04181 439 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 TNFAIP3P21580 790 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 PTPREP23469 700 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 NT5C2P49902 561 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 PPP2R3AQ06190 1150 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 SLC9C1Q4G0N8 1177 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 FBXO31Q5XUX0 539 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-201ENST00000283254 C8orf74Q6P047 294 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 B4GALNT4Q76KP1 1039 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 ESYT1Q9BSJ8 1104 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 DNAI1Q9UI46 699 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 DNM3Q9UQ16 869 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 RABGAP1Q9Y3P9 1069 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 PPFIA2O75334 1257 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 HCLS1P14317 486 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-201ENST00000283254 PLBD2Q8NHP8 589 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 ZC3H15Q8WU90 426 aaKnown RBP4.51□□□□□ -1.69
SCN3A-201ENST00000283254 CHMP2AO43633 222 aa4.51□□□□□ -1.69
SCN3A-201ENST00000283254 SATB1Q01826 763 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms