RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 BAG3O95817 575 aa12.86□□□□□ -0.35
GGPS1-201ENST00000282841 POLR3DP05423 398 aaPredicted RBP12.86□□□□□ -0.35
GGPS1-201ENST00000282841 RASGRP2Q7LDG7 609 aa12.86□□□□□ -0.35
GGPS1-201ENST00000282841 TMC4Q7Z404 712 aa12.86□□□□□ -0.35
GGPS1-201ENST00000282841 SCAF8Q9UPN6 1271 aaKnown RBP12.86□□□□□ -0.35
GGPS1-201ENST00000282841 CCDC88AQ3V6T2 1871 aa12.85□□□□□ -0.35
GGPS1-201ENST00000282841 USP17L3A6NCW0 530 aa12.85□□□□□ -0.35
GGPS1-201ENST00000282841 USP17L4A6NCW7 530 aa12.85□□□□□ -0.35
GGPS1-201ENST00000282841 GOLGA8AA7E2F4 631 aa12.85□□□□□ -0.35
GGPS1-201ENST00000282841 RHBDL3P58872 404 aa12.85□□□□□ -0.35
GGPS1-201ENST00000282841 TCP10Q12799 353 aa12.85□□□□□ -0.35
GGPS1-201ENST00000282841 SAMD1Q6SPF0 538 aaPredicted RBP12.85□□□□□ -0.35
GGPS1-201ENST00000282841 USP17L1Q7RTZ2 530 aa12.85□□□□□ -0.35
GGPS1-201ENST00000282841 TTLL6Q8N841 843 aa12.85□□□□□ -0.35
GGPS1-201ENST00000282841 ENAHQ8N8S7 591 aaPredicted RBP12.85□□□□□ -0.35
GGPS1-201ENST00000282841 ORC3Q9UBD5 711 aaPredicted RBP12.85□□□□□ -0.35
GGPS1-201ENST00000282841 ZFPM1Q8IX07 1006 aa12.85□□□□□ -0.35
GGPS1-201ENST00000282841 SMARCC2Q8TAQ2 1214 aa12.85□□□□□ -0.35
GGPS1-201ENST00000282841 ESR2Q92731 530 aa12.85□□□□□ -0.35
GGPS1-201ENST00000282841 CNNM2Q9H8M5 875 aa12.85□□□□□ -0.35
GGPS1-201ENST00000282841 DDX4Q9NQI0 724 aaKnown RBP12.85□□□□□ -0.35
GGPS1-201ENST00000282841 FAM217BQ9NTX9 383 aaPredicted RBP12.85□□□□□ -0.35
GGPS1-201ENST00000282841 LTBP1Q14766 1721 aa12.85□□□□□ -0.35
GGPS1-201ENST00000282841 FAM196BA6NMK8 535 aa12.84□□□□□ -0.35
GGPS1-201ENST00000282841 YDJCA8MPS7 323 aa12.84□□□□□ -0.35
GGPS1-201ENST00000282841 GUCY1A2P33402 732 aa12.84□□□□□ -0.35
GGPS1-201ENST00000282841 GSTO1P78417 241 aa12.84□□□□□ -0.35
GGPS1-201ENST00000282841 NFIAQ12857 509 aa12.84□□□□□ -0.35
GGPS1-201ENST00000282841 CLEC17AQ6ZS10 378 aa12.84□□□□□ -0.35
GGPS1-201ENST00000282841 ATP8A2Q9NTI2 1148 aa12.84□□□□□ -0.35
GGPS1-201ENST00000282841 MKRN1Q9UHC7 482 aaKnown RBP12.84□□□□□ -0.35
GGPS1-201ENST00000282841 ZBTB12Q9Y330 459 aaPredicted RBP12.84□□□□□ -0.35
GGPS1-201ENST00000282841 ZMYM6O95789 1325 aa12.84□□□□□ -0.35
GGPS1-201ENST00000282841 GPR75-ASB3A0A0A6YYF3 556 aa12.84□□□□□ -0.35
GGPS1-201ENST00000282841 ERICH2A1L162 156 aa12.84□□□□□ -0.35
GGPS1-201ENST00000282841 TSPY2A6NKD2 308 aa12.84□□□□□ -0.35
GGPS1-201ENST00000282841 RNF41Q9H4P4 317 aaPredicted RBP12.84□□□□□ -0.35
GGPS1-201ENST00000282841 ADAMTSL1Q8N6G6 1762 aa12.84□□□□□ -0.35
GGPS1-201ENST00000282841 SCN9AQ15858 1988 aa12.84□□□□□ -0.35
GGPS1-201ENST00000282841 LDHCP07864 332 aa12.83□□□□□ -0.35
GGPS1-201ENST00000282841 EVCP57679 992 aa12.83□□□□□ -0.35
GGPS1-201ENST00000282841 TFAP4Q01664 338 aa12.83□□□□□ -0.35
GGPS1-201ENST00000282841 C12orf60Q5U649 245 aa12.83□□□□□ -0.35
GGPS1-201ENST00000282841 CLEC10AQ8IUN9 316 aa12.83□□□□□ -0.35
GGPS1-201ENST00000282841 ZSCAN10Q96SZ4 725 aaPredicted RBP12.83□□□□□ -0.35
GGPS1-201ENST00000282841 EYA3Q99504 573 aa12.83□□□□□ -0.35
GGPS1-201ENST00000282841 SLC26A6Q9BXS9 759 aa12.83□□□□□ -0.35
GGPS1-201ENST00000282841 MKNK2Q9HBH9 465 aa12.83□□□□□ -0.35
GGPS1-201ENST00000282841 USP40Q9NVE5 1235 aa12.83□□□□□ -0.35
GGPS1-201ENST00000282841 LRRC37AA6NMS7 1700 aa12.83□□□□□ -0.36
GGPS1-201ENST00000282841 FLT1P17948 1338 aa12.83□□□□□ -0.36
GGPS1-201ENST00000282841 FAM205AQ6ZU69 1335 aa12.83□□□□□ -0.36
GGPS1-201ENST00000282841 TBC1D22AQ8WUA7 517 aa12.83□□□□□ -0.36
GGPS1-201ENST00000282841 TMEM87BQ96K49 555 aa12.83□□□□□ -0.36
GGPS1-201ENST00000282841 ANAPC4Q9UJX5 808 aa12.83□□□□□ -0.36
GGPS1-201ENST00000282841 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.83□□□□□ -0.36
GGPS1-201ENST00000282841 SART3Q15020 963 aaKnown RBP12.82□□□□□ -0.36
GGPS1-201ENST00000282841 IFIT1BQ5T764 474 aaKnown RBP12.82□□□□□ -0.36
GGPS1-201ENST00000282841 ZNF654Q8IZM8 581 aa12.82□□□□□ -0.36
GGPS1-201ENST00000282841 PDCP20941 246 aa12.82□□□□□ -0.36
GGPS1-201ENST00000282841 EIF6P56537 245 aaKnown RBP12.82□□□□□ -0.36
GGPS1-201ENST00000282841 PPP4CP60510 307 aa12.82□□□□□ -0.36
GGPS1-201ENST00000282841 SEC23AQ15436 765 aa12.82□□□□□ -0.36
GGPS1-201ENST00000282841 SHROOM1Q2M3G4 852 aaPredicted RBP12.82□□□□□ -0.36
GGPS1-201ENST00000282841 DACT2Q5SW24 774 aa12.82□□□□□ -0.36
GGPS1-201ENST00000282841 ARPP21Q9UBL0 812 aaPredicted RBP12.82□□□□□ -0.36
GGPS1-201ENST00000282841 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.82□□□□□ -0.36
GGPS1-201ENST00000282841 RGPD3A6NKT7 1758 aaPredicted RBP12.82□□□□□ -0.36
GGPS1-201ENST00000282841 RGPD4Q7Z3J3 1758 aa12.82□□□□□ -0.36
GGPS1-201ENST00000282841 PLEKHA8P1O95397 391 aa12.81□□□□□ -0.36
GGPS1-201ENST00000282841 CDC42EP5Q6NZY7 148 aa12.81□□□□□ -0.36
GGPS1-201ENST00000282841 LARGE2Q8N3Y3 721 aa12.81□□□□□ -0.36
GGPS1-201ENST00000282841 IL17RBQ9NRM6 502 aa12.81□□□□□ -0.36
GGPS1-201ENST00000282841 STX8Q9UNK0 236 aa12.81□□□□□ -0.36
GGPS1-201ENST00000282841 CRKP46108 304 aa12.81□□□□□ -0.36
GGPS1-201ENST00000282841 APOBEC3HQ6NTF7 200 aaKnown RBP12.81□□□□□ -0.36
GGPS1-201ENST00000282841 SYNE3Q6ZMZ3 975 aa12.81□□□□□ -0.36
GGPS1-201ENST00000282841 PODNQ7Z5L7 613 aa12.81□□□□□ -0.36
GGPS1-201ENST00000282841 GAS2L3Q86XJ1 694 aa12.81□□□□□ -0.36
GGPS1-201ENST00000282841 FBXL16Q8N461 479 aa12.81□□□□□ -0.36
GGPS1-201ENST00000282841 C8orf76Q96K31 380 aa12.81□□□□□ -0.36
GGPS1-201ENST00000282841 LLPHQ9BRT6 129 aaKnown RBP12.81□□□□□ -0.36
GGPS1-201ENST00000282841 CPVLQ9H3G5 476 aa12.81□□□□□ -0.36
GGPS1-201ENST00000282841 TMEM63CQ9P1W3 806 aa12.81□□□□□ -0.36
GGPS1-201ENST00000282841 WDHD1O75717 1129 aaPredicted RBP12.8□□□□□ -0.36
GGPS1-201ENST00000282841 LIFRP42702 1097 aa12.8□□□□□ -0.36
GGPS1-201ENST00000282841 PDE4BQ07343 736 aa12.8□□□□□ -0.36
GGPS1-201ENST00000282841 NTRK3Q16288 839 aa12.8□□□□□ -0.36
GGPS1-201ENST00000282841 RTN1Q16799 776 aa12.8□□□□□ -0.36
GGPS1-201ENST00000282841 TTC6Q86TZ1 520 aa12.8□□□□□ -0.36
GGPS1-201ENST00000282841 SGMS1Q86VZ5 419 aa12.8□□□□□ -0.36
GGPS1-201ENST00000282841 IQCA1Q86XH1 822 aa12.8□□□□□ -0.36
GGPS1-201ENST00000282841 KCNJ14Q9UNX9 436 aa12.8□□□□□ -0.36
GGPS1-201ENST00000282841 BCS1LQ9Y276 419 aa12.8□□□□□ -0.36
GGPS1-201ENST00000282841 SHTN1A0MZ66 631 aa12.8□□□□□ -0.36
GGPS1-201ENST00000282841 KIF28PB7ZC32 967 aa12.8□□□□□ -0.36
GGPS1-201ENST00000282841 VEGFAP15692 232 aaPredicted RBP12.8□□□□□ -0.36
GGPS1-201ENST00000282841 KIAA2012Q0VF49 1180 aa12.8□□□□□ -0.36
GGPS1-201ENST00000282841 RESTQ13127 1097 aa12.8□□□□□ -0.36
GGPS1-201ENST00000282841 GIMAP6Q6P9H5 292 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms