RNA–Protein interactions for RNA: ENST00000282268.7

XRCC4-201, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRCC4, Length 1,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-201ENST00000282268 LAMA4Q16363 1823 aa13.42□□□□□ -0.26
XRCC4-201ENST00000282268 IFIT3O14879 490 aaKnown RBP13.41□□□□□ -0.26
XRCC4-201ENST00000282268 PDE4BQ07343 736 aa13.41□□□□□ -0.26
XRCC4-201ENST00000282268 TBC1D10BQ4KMP7 808 aaPredicted RBP13.41□□□□□ -0.26
XRCC4-201ENST00000282268 TMEM67Q5HYA8 995 aa13.41□□□□□ -0.26
XRCC4-201ENST00000282268 NFXL1Q6ZNB6 911 aa13.41□□□□□ -0.26
XRCC4-201ENST00000282268 ESR2Q92731 530 aa13.41□□□□□ -0.26
XRCC4-201ENST00000282268 ZSCAN31Q96LW9 406 aaPredicted RBP13.41□□□□□ -0.26
XRCC4-201ENST00000282268 MYOZ2Q9NPC6 264 aa13.41□□□□□ -0.26
XRCC4-201ENST00000282268 TMOD2Q9NZR1 351 aa13.41□□□□□ -0.26
XRCC4-201ENST00000282268 ZNF70Q9UC06 446 aaPredicted RBP13.41□□□□□ -0.26
XRCC4-201ENST00000282268 FAM198AQ9UFP1 575 aa13.41□□□□□ -0.26
XRCC4-201ENST00000282268 CNOT7Q9UIV1 285 aaKnown RBP13.41□□□□□ -0.26
XRCC4-201ENST00000282268 SCAF8Q9UPN6 1271 aaKnown RBP13.41□□□□□ -0.26
XRCC4-201ENST00000282268 NAV1Q8NEY1 1877 aa13.41□□□□□ -0.26
XRCC4-201ENST00000282268 PSME4Q14997 1843 aa13.41□□□□□ -0.26
XRCC4-201ENST00000282268 EGFRP00533 1210 aa13.4□□□□□ -0.26
XRCC4-201ENST00000282268 SLURP2P0DP57 97 aa13.4□□□□□ -0.26
XRCC4-201ENST00000282268 NBPF9Q3BBW0 867 aa13.4□□□□□ -0.26
XRCC4-201ENST00000282268 SAMD7Q7Z3H4 446 aa13.4□□□□□ -0.26
XRCC4-201ENST00000282268 ALDH8A1Q9H2A2 487 aaPredicted RBP13.4□□□□□ -0.26
XRCC4-201ENST00000282268 SENP2Q9HC62 589 aa13.4□□□□□ -0.26
XRCC4-201ENST00000282268 TIAM2Q8IVF5 1701 aa13.4□□□□□ -0.26
XRCC4-201ENST00000282268 KLF18A0A0U1RQI7 1052 aa13.4□□□□□ -0.26
XRCC4-201ENST00000282268 RPS12P25398 132 aaKnown RBP13.4□□□□□ -0.26
XRCC4-201ENST00000282268 CCT2P78371 535 aaKnown RBP13.4□□□□□ -0.26
XRCC4-201ENST00000282268 TTC6Q86TZ1 520 aa13.4□□□□□ -0.26
XRCC4-201ENST00000282268 UBAC1Q9BSL1 405 aa13.4□□□□□ -0.26
XRCC4-201ENST00000282268 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.4□□□□□ -0.26
XRCC4-201ENST00000282268 ERICH2A1L162 156 aa13.39□□□□□ -0.27
XRCC4-201ENST00000282268 TSPY2A6NKD2 308 aa13.39□□□□□ -0.27
XRCC4-201ENST00000282268 SH2B2O14492 632 aaPredicted RBP13.39□□□□□ -0.27
XRCC4-201ENST00000282268 DDNO94850 711 aaPredicted RBP13.39□□□□□ -0.27
XRCC4-201ENST00000282268 HLA-DOAP06340 250 aa13.39□□□□□ -0.27
XRCC4-201ENST00000282268 CDK8P49336 464 aa13.39□□□□□ -0.27
XRCC4-201ENST00000282268 TFAP4Q01664 338 aa13.39□□□□□ -0.27
XRCC4-201ENST00000282268 ZNF444Q8N0Y2 327 aaPredicted RBP13.39□□□□□ -0.27
XRCC4-201ENST00000282268 IL27Q8NEV9 243 aa13.39□□□□□ -0.27
XRCC4-201ENST00000282268 BRPF3Q9ULD4 1205 aa13.39□□□□□ -0.27
XRCC4-201ENST00000282268 LAMB1P07942 1786 aa13.39□□□□□ -0.27
XRCC4-201ENST00000282268 DDTLA6NHG4 134 aaPredicted RBP13.38□□□□□ -0.27
XRCC4-201ENST00000282268 FAM196BA6NMK8 535 aa13.38□□□□□ -0.27
XRCC4-201ENST00000282268 GOLGA8BA8MQT2 603 aa13.38□□□□□ -0.27
XRCC4-201ENST00000282268 MYO1BO43795 1136 aa13.38□□□□□ -0.27
XRCC4-201ENST00000282268 ORC4O43929 436 aa13.38□□□□□ -0.27
XRCC4-201ENST00000282268 NMT2O60551 498 aa13.38□□□□□ -0.27
XRCC4-201ENST00000282268 CUL4AQ13619 759 aa13.38□□□□□ -0.27
XRCC4-201ENST00000282268 WTAPQ15007 396 aa13.38□□□□□ -0.27
XRCC4-201ENST00000282268 SART3Q15020 963 aaKnown RBP13.38□□□□□ -0.27
XRCC4-201ENST00000282268 PIAS4Q8N2W9 510 aaPredicted RBP13.38□□□□□ -0.27
XRCC4-201ENST00000282268 CRACR2BQ8N4Y2 399 aaPredicted RBP13.38□□□□□ -0.27
XRCC4-201ENST00000282268 IGDCC4Q8TDY8 1250 aa13.38□□□□□ -0.27
XRCC4-201ENST00000282268 IDI2Q9BXS1 227 aa13.38□□□□□ -0.27
XRCC4-201ENST00000282268 TRIM34Q9BYJ4 488 aa13.38□□□□□ -0.27
XRCC4-201ENST00000282268 SH2B1Q9NRF2 756 aaPredicted RBP13.38□□□□□ -0.27
XRCC4-201ENST00000282268 ANGEL1Q9UNK9 670 aaKnown RBP13.38□□□□□ -0.27
XRCC4-201ENST00000282268 CDK5RAP2Q96SN8 1893 aa13.38□□□□□ -0.27
XRCC4-201ENST00000282268 ASTN2O75129 1339 aaPredicted RBP13.37□□□□□ -0.27
XRCC4-201ENST00000282268 TNKSO95271 1327 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 CCDC69A6NI79 296 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 H7C1D1 291 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 WNT10BO00744 389 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 RXRAP19793 462 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 ZNF280AP59817 542 aaPredicted RBP13.37□□□□□ -0.27
XRCC4-201ENST00000282268 ST3GAL1Q11201 340 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 SPDYE2Q495Y8 402 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 C16orf86Q6ZW13 317 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 SH3BP5LQ7L8J4 393 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 CCDC144CPQ8IYA2 1237 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 CHMP4CQ96CF2 233 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 TMEM87BQ96K49 555 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 ZSCAN10Q96SZ4 725 aaPredicted RBP13.37□□□□□ -0.27
XRCC4-201ENST00000282268 MYL10Q9BUA6 226 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 LY9Q9HBG7 655 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 NCOA5Q9HCD5 579 aaKnown RBP13.37□□□□□ -0.27
XRCC4-201ENST00000282268 ROBO3Q96MS0 1386 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 WDR19Q8NEZ3 1342 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 PPFIA3O75145 1194 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 FGRP09769 529 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 TSPY3P0CV98 308 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 TSPY8P0CW00 308 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 PCP11498 1178 aaKnown RBP13.37□□□□□ -0.27
XRCC4-201ENST00000282268 PDIA3P30101 505 aaKnown RBP13.37□□□□□ -0.27
XRCC4-201ENST00000282268 KIF4BQ2VIQ3 1234 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 IQCA1Q86XH1 822 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 GPC2Q8N158 579 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 DPF2Q92785 391 aa13.37□□□□□ -0.27
XRCC4-201ENST00000282268 RASA1P20936 1047 aa13.36□□□□□ -0.27
XRCC4-201ENST00000282268 EPS15P42566 896 aa13.36□□□□□ -0.27
XRCC4-201ENST00000282268 SCRN1Q12765 414 aa13.36□□□□□ -0.27
XRCC4-201ENST00000282268 MTMR14Q8NCE2 650 aa13.36□□□□□ -0.27
XRCC4-201ENST00000282268 AGXT2Q9BYV1 514 aa13.36□□□□□ -0.27
XRCC4-201ENST00000282268 TMEM39BQ9GZU3 492 aa13.36□□□□□ -0.27
XRCC4-201ENST00000282268 ZNF287Q9HBT7 754 aa13.36□□□□□ -0.27
XRCC4-201ENST00000282268 SERPINB13Q9UIV8 391 aa13.36□□□□□ -0.27
XRCC4-201ENST00000282268 TAOK2Q9UL54 1235 aa13.36□□□□□ -0.27
XRCC4-201ENST00000282268 SMC3Q9UQE7 1217 aa13.36□□□□□ -0.27
XRCC4-201ENST00000282268 MYH1P12882 1939 aa13.36□□□□□ -0.27
XRCC4-201ENST00000282268 MPHOSPH10O00566 681 aaKnown RBP13.35□□□□□ -0.27
XRCC4-201ENST00000282268 PFKFB2O60825 505 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms